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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917820
Clone id YMU001_000105_H03
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TATCTGTACAAACCAACTAAAAAGCTGCTGCCTATCAAAAAAAGATTTCATACTAAAAGA
ATTGCTTTATATACTCGCTTTACCATGTCCCTACAACCAGAGCTGGCTTTACATCATCTC
ATTTTGGCGTCCCGGGAGCTCCATTTTCCGTTCTCCCCTTCTTGGATGTGAATGAAGTAG
ACACACTTTTCGCCACATACTTTCCGGCTTTGCCAATTCCACTACCCACCATGCCAACCC
CACCACCAACTACACTGGCTCCTCCAACCACCAGTTTCCCTGCTCCCCCGACAGCTCCTC
CAATCACATCAATAGTCCCACCAATCAAGCCTTCTTCTGCAGCTTTCCTTTTCTCGGCTA
GAATTGCCTGTTCTTTCTCCATTGCTTCCTTCTGCTGCTCTTTTGAATAAATTTCGTACG
TAACCTTGAGAAATAGATGGCCACGATCCCGTTTGTCCACAACATGATCCATGTCCAAAG
■■Homology search results ■■ -
sp_hit_id Q5R9W4
Definition sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein 9 OS=Pongo abelii
Align length 33
Score (bit) 30.0
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917820|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H03.
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein ...    30   5.6  
sp|Q96SU4|OSBL9_HUMAN Oxysterol-binding protein-related protein ...    30   5.6  
sp|Q7M3M6|E74EF_DROVI Ecdysone-induced protein 74EF OS=Drosophil...    30   5.6  
sp|P11536|E74EB_DROME Ecdysone-induced protein 74EF isoform B OS...    30   5.6  
sp|P20105|E74EA_DROME Ecdysone-induced protein 74EF isoform A OS...    30   5.6  
sp|Q54LN2|VP13D_DICDI Putative vacuolar protein sorting-associat...    30   7.4  
sp|P39624|SPSD_BACSU Spore coat polysaccharide biosynthesis prot...    30   7.5  
sp|Q6FWM4|MED2_CANGA Mediator of RNA polymerase II transcription...    29   9.6  

>sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein 9
           OS=Pongo abelii GN=OSBPL9 PE=2 SV=1
          Length = 736

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 227 HHANPTTNYTGSSNHQFPCSPDSSSNHINSPTN 325
           HH  PT N TG S H  P S  +S +H+N   N
Sbjct: 250 HHQTPTPNSTG-SGHSPPTSSLTSPSHVNLSPN 281


>sp|Q96SU4|OSBL9_HUMAN Oxysterol-binding protein-related protein 9
           OS=Homo sapiens GN=OSBPL9 PE=1 SV=2
          Length = 736

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 227 HHANPTTNYTGSSNHQFPCSPDSSSNHINSPTN 325
           HH  PT N TG S H  P S  +S +H+N   N
Sbjct: 250 HHQTPTPNSTG-SGHSPPSSSLTSPSHVNLSPN 281


>sp|Q7M3M6|E74EF_DROVI Ecdysone-induced protein 74EF OS=Drosophila
           virilis GN=Eip74EF PE=2 SV=1
          Length = 873

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 179 RHTFRHILSGFANSTTHHANPTTNYTGSSNHQFPCSP-DSSSNHINSPTNQAFFCS 343
           R    ++LSG A    HH N TT  TGS    FP SP DS  + ++S ++    C+
Sbjct: 433 RPLLHNLLSGGAIHNPHHRNYTTATTGS----FPPSPADSGVSDVDSSSSGGQPCA 484


>sp|P11536|E74EB_DROME Ecdysone-induced protein 74EF isoform B
           OS=Drosophila melanogaster GN=Eip74EF PE=2 SV=2
          Length = 883

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 179 RHTFRHILSGFANSTTHHANPTTNYTGSSNHQFPCSP-DSSSNHINSPTNQAFFCS 343
           R    ++LSG A    HH N TT  TGS    FP SP DS  + ++S ++    C+
Sbjct: 444 RPLLHNLLSGGAIHNPHHRNYTTATTGS----FPPSPADSGVSDVDSSSSGGQPCA 495


>sp|P20105|E74EA_DROME Ecdysone-induced protein 74EF isoform A
           OS=Drosophila melanogaster GN=Eip74EF PE=2 SV=2
          Length = 829

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 179 RHTFRHILSGFANSTTHHANPTTNYTGSSNHQFPCSP-DSSSNHINSPTNQAFFCS 343
           R    ++LSG A    HH N TT  TGS    FP SP DS  + ++S ++    C+
Sbjct: 390 RPLLHNLLSGGAIHNPHHRNYTTATTGS----FPPSPADSGVSDVDSSSSGGQPCA 441


>sp|Q54LN2|VP13D_DICDI Putative vacuolar protein sorting-associated
            protein 13D OS=Dictyostelium discoideum GN=vps13D PE=3
            SV=1
          Length = 4592

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
 Frame = +2

Query: 92   YNQSWLYIISFWRPGSSIFRSPLLGCE*SRHTFRHILSGFANSTTHHANP----TTNYTG 259
            Y+   LYI       S++F    +G +   H F +  S   NST HH +P    T N + 
Sbjct: 3590 YSSDLLYIKVPNSDWSNVFSLETVGTDGIIHCFSNTNSN--NSTNHHQDPFYSSTFNNSS 3647

Query: 260  SSNHQFPCSPDSSSNHINSPTNQA 331
            + N     S +++SN ++ P++ +
Sbjct: 3648 NDNINNGNSNNNTSNSLSPPSSSS 3671


>sp|P39624|SPSD_BACSU Spore coat polysaccharide biosynthesis protein
           spsD OS=Bacillus subtilis GN=spsD PE=4 SV=1
          Length = 289

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 25  LLPIKKRFHTKRIALYTRFTMSLQPELALHHLILASRELH 144
           L+ +K  F  KRIA +    +  QPE   H  + A  +LH
Sbjct: 219 LMAVKPGFEGKRIAFHLLANLIEQPETQKHRTVTAGTQLH 258


>sp|Q6FWM4|MED2_CANGA Mediator of RNA polymerase II transcription
           subunit 2 OS=Candida glabrata GN=MED2 PE=3 SV=1
          Length = 368

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 203 SGFANSTTHHANPTTNYTGSSNHQFPCSPDSSSNHINSPT 322
           SGF  + T +AN TTN   ++N+  P + DS+ N  N PT
Sbjct: 257 SGFDTANTSNANATTNSVPNNNN--PATNDSNMN--NDPT 292
tr_hit_id Q9IBF0
Definition tr|Q9IBF0|Q9IBF0_ANGJA Wilms' tumor protein OS=Anguilla japonica
Align length 59
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917820|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H03.
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9IBF0|Q9IBF0_ANGJA Wilms' tumor protein OS=Anguilla japonica...    36   1.1  
tr|A6SGI0|A6SGI0_BOTFB Predicted protein OS=Botryotinia fuckelia...    34   3.2  
tr|A7PY44|A7PY44_VITVI Chromosome chr15 scaffold_37, whole genom...    34   4.1  
tr|Q1K928|Q1K928_NEUCR Putative uncharacterized protein OS=Neuro...    33   5.4  
tr|O93835|O93835_NEUCR Fr protein OS=Neurospora crassa GN=fr PE=...    33   5.4  
tr|O48645|O48645_SOLLC CLB1 OS=Solanum lycopersicum PE=2 SV=1          33   5.4  
tr|Q5BWV9|Q5BWV9_SCHJA SJCHGC09604 protein (Fragment) OS=Schisto...    33   7.0  
tr|B6PS91|B6PS91_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  
tr|A2EY09|A2EY09_TRIVA Putative uncharacterized protein OS=Trich...    33   9.2  

>tr|Q9IBF0|Q9IBF0_ANGJA Wilms' tumor protein OS=Anguilla japonica
           GN=EWT1 PE=2 SV=1
          Length = 392

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +2

Query: 182 HTFRHILSGFANSTTHHANPTTNYTGSSNHQFPCSPDSSSNHINS---PTNQAFFCSFP 349
           HT  H  S F+N T  H +P T  +     QFP  P   S H  S    TNQA     P
Sbjct: 148 HTPSHHASQFSNQTFKHEDPLTQPSNMGEQQFPAPPPVYSCHTPSDSCSTNQALLLRNP 206


>tr|A6SGI0|A6SGI0_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_11461 PE=4 SV=1
          Length = 649

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 413 NLFKRAAEGSNGERTGNSSREKESCRRRLDWWDY*CDWRSCRGSRETGGWRS 258
           NLF   +E SN  + G+ + EK   RRRL+      D  S  G +E   W++
Sbjct: 212 NLFPNTSENSNSRQPGSLNSEKREGRRRLE------DLHSSSGEKEAFSWKN 257


>tr|A7PY44|A7PY44_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026294001
           PE=4 SV=1
          Length = 513

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 478 LDMDHVVDKRDRGHLFLKVTYEIYSXXXXXXXXXXXXAILAEKRKAAEEGL 326
           LDM  + DK+DRG + +KV Y  ++             IL E++K  E G+
Sbjct: 369 LDMLKIKDKKDRGTITIKVLYHAFNKEEQMAALEEEKRILEERKKLKEAGV 419


>tr|Q1K928|Q1K928_NEUCR Putative uncharacterized protein
           OS=Neurospora crassa GN=NCU07483 PE=4 SV=1
          Length = 721

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
 Frame = +1

Query: 4   LYKPTKKLLPIKKRFHTKRIALYTRFTMSLQPELALHHLILASRELHFPFSPSWM*MK*T 183
           +YKPT+  L   K    K +    R+     PE+ LHH I    + +F   P  +  + +
Sbjct: 318 IYKPTEHFLNQVKWTKQKAVEKELRYLRGEVPEVKLHHRIEELNQANFKDQPHLVHDENS 377

Query: 184 HFSPHTFRLCQFHYP-------PCQPHHQLHWLLQPP 273
              P    +   H P       PC P  + HW   PP
Sbjct: 378 QKVPDLPTILLTHVPLYRPPGTPCGPKRE-HWPPTPP 413


>tr|O93835|O93835_NEUCR Fr protein OS=Neurospora crassa GN=fr PE=4
           SV=1
          Length = 756

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
 Frame = +1

Query: 4   LYKPTKKLLPIKKRFHTKRIALYTRFTMSLQPELALHHLILASRELHFPFSPSWM*MK*T 183
           +YKPT+  L   K    K +    R+     PE+ LHH I    + +F   P  +  + +
Sbjct: 318 IYKPTEHFLNQVKWTKQKAVEKELRYLRGEVPEVKLHHRIEELNQANFKDQPHLVHDENS 377

Query: 184 HFSPHTFRLCQFHYP-------PCQPHHQLHWLLQPP 273
              P    +   H P       PC P  + HW   PP
Sbjct: 378 QKVPDLPTILLTHVPLYRPPGTPCGPKRE-HWPPTPP 413


>tr|O48645|O48645_SOLLC CLB1 OS=Solanum lycopersicum PE=2 SV=1
          Length = 505

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -3

Query: 478 LDMDHVVDKRDRGHLFLKVTYEIYSXXXXXXXXXXXXAILAEKRKAAEEGL 326
           LDM  V DK+DRG + +KV Y  ++            AIL E++K   EG+
Sbjct: 368 LDMLKVKDKKDRGTITIKVLYHEFNKEEQLAALEAEKAILEERKKLKAEGV 418


>tr|Q5BWV9|Q5BWV9_SCHJA SJCHGC09604 protein (Fragment)
           OS=Schistosoma japonicum PE=2 SV=2
          Length = 192

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
 Frame = +2

Query: 218 STTHHANPTTNYTGSSN--------HQFPCSPDSSSNHINSP 319
           ST  + +P +NY G SN        H  P SP SSS+H +SP
Sbjct: 41  STAGYNSPNSNYRGLSNGHSMPPGHHPTPLSPTSSSSHNDSP 82


>tr|B6PS91|B6PS91_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_132687 PE=4 SV=1
          Length = 1261

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 407 FKRAAEGSNGERTGNSSREKESCRRRLDWWDY*CDWRSCR 288
           FK   E SNG +    SR +   R++L W+   C W  C+
Sbjct: 266 FKEEKEVSNGNQENGQSRSRRVARQQLSWFT--CVWEGCK 303


>tr|A2EY09|A2EY09_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_055660 PE=4 SV=1
          Length = 890

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +2

Query: 131 PGSSIFRSPLLGCE*SRHTFRHILSGFANSTTHHANPTTNYTGSSNHQFPCSPDSSSNHI 310
           P SS F SPL   +   H F + +S  ++++ + AN ++    +    +  SP SSS+ +
Sbjct: 73  PNSSKFSSPLRKTQVPEHNFSNFVSN-SSTSYYSANKSSQLQSNIETMYTASPQSSSHAV 131

Query: 311 NSPTNQ 328
               NQ
Sbjct: 132 FEDPNQ 137