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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917824
Clone id YMU001_000105_H08
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCTCGAACCAGCACTACCGCTTGTGCTCCTTGTCTTAAGTTCTGTTATCCAGCCTTTGG
GAAGCCAATCAGGGGACTCAACCACCTCTACATTGTAATGAAAACGTCTTATTGTTAGCT
CTTGACTGATTACAGGAGTTGTAGATGCTTTCTTTTTGGACTTTCTCTTCCTTTGACTGG
CCTTGGAACCTCCAATTTCTGCACTCAGAACAATATTGTTCTCACCACCTTGCGTATCAT
CCCTGGACGCTTCATCCAAGGTAAGGTTTCCATGAACAGCACTGCTGTAGTCTGACTGCT
CCATGTCCATTTGCGCATGATGATCATTCTCTGCACAATCCTGTGAGCCAATAAATCTTT
GAAGCCGAGAATCTTGGTCATCTATACTAACCTGGCTTCCCATTACTTCATTGAAGGCTT
GCAAAGAAAAAGAAGGTGCATCTGCTTAGCTTTGAGTACCTTGAAATTGAACCTTTCTGC
CTTTTCTGACCTGATTTCCTTGCACTCTTTGTGATCTG
■■Homology search results ■■ -
sp_hit_id P04929
Definition sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium lophurae
Align length 47
Score (bit) 33.9
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917824|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H08.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l...    34   0.47 
sp|Q04511|UFO1_YEAST Ubiquitin ligase complex F-box protein UFO1...    33   1.0  
sp|P54005|DIA1_YEAST Protein DIA1 OS=Saccharomyces cerevisiae GN...    32   2.3  
sp|Q5ZI40|GTDC1_CHICK Glycosyltransferase-like domain-containing...    30   5.2  
sp|Q5UP04|YR748_MIMIV Putative ankyrin repeat protein R748 OS=Ac...    30   6.8  
sp|Q9HE05|UFD2_SCHPO Ubiquitin conjugation factor E4 OS=Schizosa...    30   8.8  

>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium
           lophurae PE=4 SV=1
          Length = 351

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 202 HSEQYCSHHLAYH-PWTLHPR*GFHEQHCCSLTAPCPFAHDDHSLHN 339
           H E +  HH A+H PW  H   G+H  H     AP    H  H+ H+
Sbjct: 145 HEEHHHHHHAAHHHPWFHHHHLGYHHHH-----APHHHHHHHHAPHH 186


>sp|Q04511|UFO1_YEAST Ubiquitin ligase complex F-box protein UFO1
           OS=Saccharomyces cerevisiae GN=UFO1 PE=1 SV=1
          Length = 668

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -2

Query: 421 QAFNEVMGSQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASR 242
           QA N+    +   DD+D +L+R +           +Q+  E    SSA HGN T DE   
Sbjct: 533 QARNQAEAGEPVGDDEDEQLRRAL---------EESQLIYETQTNSSANHGNNTNDEIDE 583

Query: 241 DDTQ 230
           DD +
Sbjct: 584 DDEE 587


>sp|P54005|DIA1_YEAST Protein DIA1 OS=Saccharomyces cerevisiae
           GN=DIA1 PE=1 SV=1
          Length = 336

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = -2

Query: 397 SQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYS-SAVHGNLTLDEASRDDTQGGE 221
           +++SID +D ++QRF+ +        H   + E S +   A  G+L L E S D    G 
Sbjct: 232 NKMSIDQKDQKVQRFVAA--------HYTREFETSLFRWVAQEGHLILGEYSTDQGSFGL 283

Query: 220 NNI-VLSAEIG 191
           NNI  L+ E+G
Sbjct: 284 NNIPPLTEELG 294


>sp|Q5ZI40|GTDC1_CHICK Glycosyltransferase-like domain-containing
           protein 1 OS=Gallus gallus GN=GTDC1 PE=2 SV=1
          Length = 382

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -3

Query: 357 DLLAHRIVQRMIIM----RKWTWSSQTTAVLFMETLP 259
           DLL   + +  ++     +KW W ++T A+ FM+T+P
Sbjct: 19  DLLQEELKEECVLCTLPAKKWHWKARTAALYFMQTVP 55


>sp|Q5UP04|YR748_MIMIV Putative ankyrin repeat protein R748
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R748 PE=4
           SV=1
          Length = 877

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
 Frame = -2

Query: 397 SQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHG--------NLTLDEASR 242
           S+ + DD D++     G Q C ++D     D  +SD S+ ++         N + D    
Sbjct: 503 SESTDDDSDTKRACSCGCQSCYDSDEDPVCDSNESDNSNDINNHVKSDNKLNSSNDYYDE 562

Query: 241 DDTQGGENN 215
           DD++   NN
Sbjct: 563 DDSEDNYNN 571


>sp|Q9HE05|UFD2_SCHPO Ubiquitin conjugation factor E4
           OS=Schizosaccharomyces pombe GN=ufd2 PE=2 SV=1
          Length = 1010

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +2

Query: 377 VIYTNLASHYFIEGLQRKRRCICLALSTLKLNLSAFSDLI 496
           V   ++AS YF    +R  + I  ++S+LKL +S + D++
Sbjct: 298 VFTQDVASRYFSNSTERSAQNISSSISSLKLTMSTYQDVL 337
tr_hit_id A7NYZ9
Definition tr|A7NYZ9|A7NYZ9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 27
Score (bit) 39.7
E-value 0.091
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917824|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H08.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NYZ9|A7NYZ9_VITVI Chromosome chr6 scaffold_3, whole genome ...    40   0.091
tr|A6R2P5|A6R2P5_AJECN Sad1-interacting factor 2 OS=Ajellomyces ...    35   2.2  
tr|B5VP41|B5VP41_YEAS6 YML088Wp-like protein OS=Saccharomyces ce...    33   8.5  
tr|B3LLG8|B3LLG8_YEAS1 Ubiquitin ligase complex F-box protein UF...    33   8.5  
tr|A6ZLX7|A6ZLX7_YEAS7 F-box protein OS=Saccharomyces cerevisiae...    33   8.5  
tr|A4RLI4|A4RLI4_MAGGR Putative uncharacterized protein OS=Magna...    33   8.5  

>tr|A7NYZ9|A7NYZ9_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024316001
           PE=4 SV=1
          Length = 232

 Score = 39.7 bits (91), Expect = 0.091
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = -2

Query: 82  VESPDWLPKGWITELKTRSTSGSAGSR 2
           VE  DWLP GWI E + RS+  SAGSR
Sbjct: 166 VEREDWLPPGWIVEGRVRSSGASAGSR 192


>tr|A6R2P5|A6R2P5_AJECN Sad1-interacting factor 2 OS=Ajellomyces
           capsulata (strain NAm1 / WU24) GN=HCAG_03903 PE=4 SV=1
          Length = 536

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -2

Query: 400 GSQVS--IDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASRDDTQG 227
           G +VS  IDD+D R++R  G  D  EN H       Q+D S+A+    TLD  S  D   
Sbjct: 244 GQRVSSEIDDEDQRIRRQEGLIDLEENHHG-----PQADSSTAIPATNTLDTISTTDDAN 298

Query: 226 G 224
           G
Sbjct: 299 G 299


>tr|B5VP41|B5VP41_YEAS6 YML088Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_130470 PE=4
           SV=1
          Length = 668

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -2

Query: 421 QAFNEVMGSQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASR 242
           QA N+    +   DD+D +L+R +           +Q+  E    SSA HGN T DE   
Sbjct: 533 QARNQAEAGEPVGDDEDEQLRRAL---------EESQLIYETQTNSSANHGNSTNDEIDE 583

Query: 241 DDTQ 230
           DD +
Sbjct: 584 DDEE 587


>tr|B3LLG8|B3LLG8_YEAS1 Ubiquitin ligase complex F-box protein UFO1
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_01810 PE=4 SV=1
          Length = 668

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -2

Query: 421 QAFNEVMGSQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASR 242
           QA N+    +   DD+D +L+R +           +Q+  E    SSA HGN T DE   
Sbjct: 533 QARNQAEAGEPVGDDEDEQLRRAL---------EESQLIYETQTNSSANHGNSTNDEIDE 583

Query: 241 DDTQ 230
           DD +
Sbjct: 584 DDEE 587


>tr|A6ZLX7|A6ZLX7_YEAS7 F-box protein OS=Saccharomyces cerevisiae
           (strain YJM789) GN=UFO1 PE=4 SV=1
          Length = 668

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -2

Query: 421 QAFNEVMGSQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASR 242
           QA N+    +   DD+D +L+R +           +Q+  E    SSA HGN T DE   
Sbjct: 533 QARNQAEAGEPVGDDEDEQLRRAL---------EESQLIYETQTNSSANHGNSTNDEIDE 583

Query: 241 DDTQ 230
           DD +
Sbjct: 584 DDEE 587


>tr|A4RLI4|A4RLI4_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_01183 PE=4 SV=1
          Length = 680

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 409 EVMGSQVSIDDQDSRLQRFIGSQDCAENDHHAQMDMEQSDYSSAVHGNLTLDEASRDDTQ 230
           E  G++   DD ++ L    G  D A +D     + E++D       +  +D+AS DD Q
Sbjct: 517 EADGAEADEDDDEAVLAIENGEMDVAGSDDDDDEEDEEADAGFGGFSDAEVDDASEDDEQ 576

Query: 229 GG---ENNIVLSAEIGG 188
                +  I L AE+ G
Sbjct: 577 TSAALQRQIELEAELSG 593