BP917825
Clone id YMU001_000105_H09
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACACCTACCTGTATGAATCCAGGAAATTCGCAAATTAGAACTGAGCTTTTACATATGAAT
CTTCACATCAATTTCTAAGAGGTCCATGATATATTACCTTAAAACGTTCTTTCTTGATTC
CAAAAGCCTCTTTGAAGGAAGGTTTCTATGTGGCAAATGAAAAGCTTTTGAATCACTTAC
CTTCAATCATCACAAAAATGGCCAACTATTAAATCCTTCCCCATCTCAGCCCTTGATCGT
AAATTTCGAGCATGTGTTCGGTCCTCTTTTAGATCATTTCTTGATCCTCAGTTTAGGGGG
GGGTATTCAGAAGACTGTTTGTTATACAGCTCTGACTTGTTTACTTACATATGTATTGGA
TTGACTTATGGTCTACCATGAACGCCATCATAGTTGGCCAGTTGATGACCAAAATTTCCT
TGGAAAACAGCTTTTCCTGTACTGTGGAAGCCTTTGTCGTAGAATAGCTGTGTGCCCATC
TTCAATGGGCTTTGGCTCTTT
■■Homology search results ■■ -
sp_hit_id A6UUN1
Definition sp|A6UUN1|SYM_META3 Methionyl-tRNA synthetase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)
Align length 32
Score (bit) 29.6
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917825|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H09.
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6UUN1|SYM_META3 Methionyl-tRNA synthetase OS=Methanococcus a... 30 8.2

>sp|A6UUN1|SYM_META3 Methionyl-tRNA synthetase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=metG PE=3
SV=1
Length = 672

Score = 29.6 bits (65), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2

Query: 374 YHERHHSWPVDDQNFLGKQLFLYCGSLCRRIA 469
Y ++ W VDD+N L KQ+ CG + + IA
Sbjct: 458 YFQKMEPWTVDDENRL-KQIMFVCGVITKHIA 488


tr_hit_id A0BZ50
Definition tr|A0BZ50|A0BZ50_PARTE Chromosome undetermined scaffold_138, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 33
Score (bit) 33.5
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917825|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H09.
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0BZ50|A0BZ50_PARTE Chromosome undetermined scaffold_138, who... 33 5.7
tr|Q2S749|Q2S749_HAHCH Beta-glucosidase/6-phospho-beta-glucosida... 33 9.9
tr|Q974Z1|Q974Z1_SULTO Putative uncharacterized protein ST0521 O... 33 9.9

>tr|A0BZ50|A0BZ50_PARTE Chromosome undetermined scaffold_138, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00033670001 PE=4 SV=1
Length = 4267

Score = 33.5 bits (75), Expect = 5.7
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3

Query: 111 FLIPKASLKEGFYVANEKLLNHLPSIITKMANY 209
F+IP L EGFY++ EK+ +P + K+ANY
Sbjct: 2333 FIIPLQQLDEGFYLSEEKIAQAIPQL--KIANY 2363


>tr|Q2S749|Q2S749_HAHCH
Beta-glucosidase/6-phospho-beta-glucosidase/beta-
galactosidase OS=Hahella chejuensis (strain KCTC 2396)
GN=HCH_06907 PE=3 SV=1
Length = 438

Score = 32.7 bits (73), Expect = 9.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1

Query: 202 PTIKSFPISALDRKF-RACVRSSFRSFLDPQFRGGYSEDCLLYSSD 336
PT + P S DR+ R ++ R ++DP FRG Y +D L Y D
Sbjct: 224 PTYPANPESEADRQLARLDDGTNIRWYMDPIFRGAYPQDVLAYLGD 269


>tr|Q974Z1|Q974Z1_SULTO Putative uncharacterized protein ST0521
OS=Sulfolobus tokodaii GN=ST0521 PE=4 SV=1
Length = 634

Score = 32.7 bits (73), Expect = 9.9
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1

Query: 148 MWQMKSF*ITYLQSSQKWPTIKSFPISALDRKF-RACVRSSFRSFLDPQFR-GGYSEDCL 321
M+ ++ + + + S +K P+ + IS +D F R + LD + + G S+D
Sbjct: 1 MYNVEIYYMAVISSGKKKPSDEKINISQIDLLFYRTSLVEPLAKSLDKKLKQAGLSDDPR 60

Query: 322 LYSSDLFTYICIGLTYGL 375
+Y+S LF ++ +G+ G+
Sbjct: 61 IYASRLFFFLILGIIIGV 78