BP917828
Clone id YMU001_000106_A05
Library
Length 436
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATCAGCATGTGCATCCTGGGTCATCATGGCAACATGAAGGGAGCACTAGCAAGACAATG
CGTCAGGTTGACGCCAATGTATTTGCCTCTAGAGTGTCACCTCTAAAGCCAAAAGATAAC
ACTGTTGATGGTTATAGTAACATGGGGTCCCATTGTTTGGACACTTCCAGTACGATGGTA
GCAGAACACCAAGTGGTGGCATCTACCCATAACGCCCGATTTGAAAGGAGGCGGCAAGAT
GCTGTTTCATCACTTAATGCGGCTGTCGATGAGAAGGATGAAGGGCTAGATTTTGGAGCC
CCCAGAATTTCTGACGGAGACTCTTTCGATCAAAGTGAAAGTAGAATGCGGTCACCTGAA
GAACTCTACTGCACCCGTTACATGAGACATATGGAGCAGCACCATCCTTGGGTAATGGAG
GATATTGAGAGAGCCT
■■Homology search results ■■ -
sp_hit_id Q9FHK4
Definition sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190 OS=Arabidopsis thaliana
Align length 30
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917828|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_A05.
(436 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190 OS=Arabi... 32 1.5
sp|Q24708|CSW_DROVI Tyrosine-protein phosphatase corkscrew (Frag... 31 2.6
sp|Q5MJ10|SPXN2_HUMAN Sperm protein associated with the nucleus ... 30 3.4
sp|P0C1K1|TAT_HV1AN Protein Tat OS=Human immunodeficiency virus ... 30 5.7
sp|Q8SQ72|SGCG_CANFA Gamma-sarcoglycan OS=Canis familiaris GN=SG... 30 5.7
sp|P27018|NCAP_SV41 Nucleoprotein OS=Simian virus 41 GN=N PE=2 SV=1 30 5.7
sp|Q93618|ZC3HF_CAEEL Zinc finger CCCH domain-containing protein... 29 7.5
sp|A8WMM4|ZC3HF_CAEBR Zinc finger CCCH domain-containing protein... 29 7.5
sp|Q5ZM98|GRP75_CHICK Stress-70 protein, mitochondrial OS=Gallus... 29 7.5
sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo sa... 29 7.5
sp|Q0JHZ2|C3H11_ORYSJ Zinc finger CCCH domain-containing protein... 29 7.5
sp|Q54DA5|ZC3HF_DICDI Zinc finger CCCH domain-containing protein... 29 9.8
sp|Q9RC82|YPEB_BACHD Sporulation protein ypeB OS=Bacillus halodu... 29 9.8
sp|A1TYU8|SYR_MARAV Arginyl-tRNA synthetase OS=Marinobacter aqua... 29 9.8

>sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190
OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1
Length = 615

Score = 31.6 bits (70), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1

Query: 412 PKDGAAPYVSCNGCSRVLQVTAFYFHFDRK 323
P G AP+VSC CS LQ+ + F RK
Sbjct: 492 PTAGGAPFVSCYSCSENLQLPVDFLIFKRK 521


>sp|Q24708|CSW_DROVI Tyrosine-protein phosphatase corkscrew
(Fragment) OS=Drosophila virilis GN=csw PE=3 SV=1
Length = 764

Score = 30.8 bits (68), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1

Query: 76 NVFASRVSPLKPK---DNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHN 213
N A+++ P P N + N GS+C +SST A+H V S+ N
Sbjct: 596 NKHAAKLQPPLPPLGASNNNNSSGNSGSYCNSSSSTSTAQHNGVVSSSN 644


>sp|Q5MJ10|SPXN2_HUMAN Sperm protein associated with the nucleus on
the X chromosome N2 OS=Homo sapiens GN=SPANXN2 PE=2 SV=1
Length = 180

Score = 30.4 bits (67), Expect = 3.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1

Query: 211 NARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEEL 366
N+ + Q +S+N +E+DEGLD + + D SE + E+L
Sbjct: 64 NSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDL 115


>sp|P0C1K1|TAT_HV1AN Protein Tat OS=Human immunodeficiency virus
type 1 (isolate ANT70 group O) PE=3 SV=1
Length = 114

Score = 29.6 bits (65), Expect = 5.7
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = -1

Query: 427 QYPPLPKDGAAPYVSCNGCSRVLQVTAFYFHFDRKSL----RQKFWGLQNLALHPSHRQP 260
+ PP G+ P + CN C Y F RK L +K G A HP H+ P
Sbjct: 7 EVPPWHHPGSQPQIPCNNCYCKRCCYHCYVCFVRKGLGISYGRKKRGRPAAASHPDHKDP 66


>sp|Q8SQ72|SGCG_CANFA Gamma-sarcoglycan OS=Canis familiaris GN=SGCG
PE=3 SV=1
Length = 291

Score = 29.6 bits (65), Expect = 5.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2

Query: 116 ITLLMVIVTWGPIVWTLPVRW*QNTKWWHLPITPD---LKGGGKMLF 247
+ L++++V + +W L V W T HL +T D L+G + LF
Sbjct: 42 LLLIILLVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLF 88


>sp|P27018|NCAP_SV41 Nucleoprotein OS=Simian virus 41 GN=N PE=2 SV=1
Length = 543

Score = 29.6 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1

Query: 283 GLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVMEDIE 429
G DF P+ + G S ++ +++M T+Y++H++QH+ E E
Sbjct: 484 GFDFSVPQRAPGMSDEEFQAQM--------TKYIQHVQQHYQEAQEGAE 524


>sp|Q93618|ZC3HF_CAEEL Zinc finger CCCH domain-containing protein 15
homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=3 SV=3
Length = 374

Score = 29.3 bits (64), Expect = 7.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1

Query: 172 YWKCPNNGTPCYYNH 128
+W+CPN G C Y H
Sbjct: 182 FWECPNGGEKCQYRH 196


>sp|A8WMM4|ZC3HF_CAEBR Zinc finger CCCH domain-containing protein 15
homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1
Length = 380

Score = 29.3 bits (64), Expect = 7.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1

Query: 172 YWKCPNNGTPCYYNH 128
+W+CPN G C Y H
Sbjct: 188 FWECPNGGDKCQYRH 202


>sp|Q5ZM98|GRP75_CHICK Stress-70 protein, mitochondrial OS=Gallus
gallus GN=HSPA9 PE=1 SV=1
Length = 675

Score = 29.3 bits (64), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1

Query: 175 MVAEHQVVASTHNARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRS 354
M A+ Q V + HN + +R ++ V + + + F R S+GD++ ++ ++ S
Sbjct: 105 MPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYS 164

Query: 355 PEEL 366
P ++
Sbjct: 165 PSQI 168


>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo
sapiens GN=C9orf85 PE=2 SV=1
Length = 179

Score = 29.3 bits (64), Expect = 7.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2

Query: 197 WHLPITPDLKGGGKMLFHHLMRL 265
W LP+ P L+ G++L HH +RL
Sbjct: 109 WSLPLLPRLECSGRILAHHNLRL 131


tr_hit_id B4LZ52
Definition tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis
Align length 114
Score (bit) 36.2
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917828|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_A05.
(436 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis GN=GJ23294 ... 36 0.84
tr|Q1HR44|Q1HR44_AEDAE NMD protein OS=Aedes aegypti PE=2 SV=1 35 2.4
tr|Q0IGB3|Q0IGB3_AEDAE Nonsense-mediated mrna decay protein OS=A... 35 2.4
tr|A2Q4V1|A2Q4V1_MEDTR CAMP response element binding (CREB) prot... 33 5.4
tr|B4Q3Z7|B4Q3Z7_DROSI GD24306 (Fragment) OS=Drosophila simulans... 33 5.4
tr|A5DE85|A5DE85_PICGU Putative uncharacterized protein OS=Pichi... 33 5.4
tr|B4IFL5|B4IFL5_DROSE GM23396 OS=Drosophila sechellia GN=GM2339... 33 7.1
tr|B6HWD9|B6HWD9_PENCH Pc23g00890 protein OS=Penicillium chrysog... 33 7.1
tr|Q6NHV5|Q6NHV5_CORDI Putative exonuclease, SbcD-family OS=Cory... 33 9.2
tr|P93783|P93783_SACOF Sucrose-phosphate synthase OS=Saccharum o... 33 9.2
tr|A9UFX6|A9UFX6_SACOF Sucrose phosphate synthase III OS=Sacchar... 33 9.2
tr|A9UFX5|A9UFX5_SACOF Sucrose phosphate synthase III OS=Sacchar... 33 9.2
tr|A1BU63|A1BU63_9CAUD Conserved phage protein OS=Staphylococcus... 33 9.2
tr|Q4PHZ5|Q4PHZ5_USTMA Putative uncharacterized protein OS=Ustil... 33 9.2
tr|A2RB06|A2RB06_ASPNC Contig An18c0160, complete genome OS=Aspe... 33 9.2

>tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis GN=GJ23294 PE=4
SV=1
Length = 1966

Score = 36.2 bits (82), Expect = 0.84
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Frame = +1

Query: 49 SKTMRQV------DANVFAS-RVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVAST 207
S MRQ+ DA F S R P D++++G+SNM S + +V A+T
Sbjct: 879 SVLMRQIGPAKLDDARKFESERPKPNGTADSSMEGWSNMTVMDESKSYYRIFSAEVDANT 938

Query: 208 HNARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEELY 369
+FE+ R ++ SL+ + EG++ A SD + +++ ++ + ++ +
Sbjct: 939 TEFQFEKLRHFSLYSLSVRACREREGVNDTADVCSDAEPWEKRTRKLANMDKAF 992


>tr|Q1HR44|Q1HR44_AEDAE NMD protein OS=Aedes aegypti PE=2 SV=1
Length = 510

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +1

Query: 40 GSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNAR 219
G + R V A+V+ + S L +NT+ S++G H L +++ A+ +NA
Sbjct: 341 GQGPVSFRHVLADVWVVKASELGINENTIHTRSHLG-HLLKPGDSVMGYDLQDANINNAD 399

Query: 220 FERRRQDAVSSL 255
FE+ +QD+V L
Sbjct: 400 FEKLKQDSVPDL 411


>tr|Q0IGB3|Q0IGB3_AEDAE Nonsense-mediated mrna decay protein
OS=Aedes aegypti GN=AAEL003039 PE=4 SV=1
Length = 510

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +1

Query: 40 GSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNAR 219
G + R V A+V+ + S L +NT+ S++G H L +++ A+ +NA
Sbjct: 341 GQGPVSFRHVLADVWVVKASELGINENTIHTRSHLG-HLLKPGDSVMGYDLQDANINNAD 399

Query: 220 FERRRQDAVSSL 255
FE+ +QD+V L
Sbjct: 400 FEKLKQDSVPDL 411


>tr|A2Q4V1|A2Q4V1_MEDTR CAMP response element binding (CREB) protein
OS=Medicago truncatula GN=MtrDRAFT_AC157891g24v2 PE=3
SV=1
Length = 476

Score = 33.5 bits (75), Expect = 5.4
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 3/138 (2%)
Frame = +1

Query: 16 PGSSWQHEGSTS---KTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAE 186
P SS +HEG + K +R++ N A+R S L+ K ++ S+ +
Sbjct: 171 PTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKK-----------AYIQQLESSRIKL 219

Query: 187 HQVVASTHNARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEEL 366
+Q+ H+AR ++G+ FG + G+ S + + S +
Sbjct: 220 NQMEQELHHAR-------------------NQGMFFGGGAMLGGEQGLPSMNTISSEAAM 260

Query: 367 YCTRYMRHMEQHHPWVME 420
+ Y R +E+HH V E
Sbjct: 261 FDVEYARWLEEHHRLVCE 278


>tr|B4Q3Z7|B4Q3Z7_DROSI GD24306 (Fragment) OS=Drosophila simulans
GN=GD24306 PE=4 SV=1
Length = 721

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1

Query: 268 DEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVMED 423
DE ++GL FG+ DGD + E + P+ + + H P ++ED
Sbjct: 650 DEGNDGLHFGSDDDDDGDVHKEEEVEVEQPKAKKAKKAKPEKQNHRPAIVED 701


>tr|A5DE85|A5DE85_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_01586 PE=4 SV=2
Length = 403

Score = 33.5 bits (75), Expect = 5.4
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +1

Query: 109 PKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNARFERRRQDAVSSLNAAVDEKDEGL 288
P+ T++ SN+ D+ ++ + + V++T N ++Q+ VSS+ DE+D L
Sbjct: 32 PQQTTMEELSNVIPESGDSDQVIIVDTETVSTT-NGLGSLQKQEMVSSVEPIEDEQDSDL 90

Query: 289 D-FGAPRISDGDSFDQSESRMRS---PEELYCTRYMRHMEQHHP 408
+ + + S GD Q+ R S E + R + + HP
Sbjct: 91 ESLNSDQESQGDQETQNPCRKVSLCVGERVVVGRASKTNAERHP 134


>tr|B4IFL5|B4IFL5_DROSE GM23396 OS=Drosophila sechellia GN=GM23396
PE=4 SV=1
Length = 764

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1

Query: 268 DEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVMED 423
DE ++GL FG+ DGD + E + P+ + + H P ++ED
Sbjct: 693 DEGNDGLHFGSDDDDDGDVHKEEEVEVEQPKAKKVKKAKPEKQNHRPAIVED 744


>tr|B6HWD9|B6HWD9_PENCH Pc23g00890 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc23g00890 PE=4 SV=1
Length = 582

Score = 33.1 bits (74), Expect = 7.1
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +1

Query: 103 LKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNARFERRRQDAVSSLNAAVDE--K 276
LKPK+N D S SS ++ +V++ + E + + S++ A D +
Sbjct: 315 LKPKNNNPDSTKKTASFSNQVSSHIIPNSRVISRSDEDAIETDDEVSESAIGDAEDSDWE 374

Query: 277 DEGLDFGAPRISD-GDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVME 420
D + G P + + G F + +SR +L R M M H P M+
Sbjct: 375 DSIAEGGEPSVDEQGGMFQRVDSR----PDLVSRRSMLTMMMHRPARMQ 419


>tr|Q6NHV5|Q6NHV5_CORDI Putative exonuclease, SbcD-family
OS=Corynebacterium diphtheriae GN=DIP1025 PE=4 SV=1
Length = 373

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +1

Query: 16 PGSSWQHEGSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQV 195
P W E T DA F S ++ K+NTV Y+ G+ + T + E +
Sbjct: 250 PVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTMQYLETECEK 309

Query: 196 VASTHNARFERRR 234
+ A +ERRR
Sbjct: 310 LRPIFAALYERRR 322


>tr|P93783|P93783_SACOF Sucrose-phosphate synthase OS=Saccharum
officinarum GN=SoSPS2 PE=4 SV=1
Length = 963

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1

Query: 223 ERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRH 390
E+ R DA + ++ + E ++G D G P ++ GDS S + S ++LY H
Sbjct: 109 EKTRADATADMSEDLFEGEKGEDAGDPSVAYGDSTTGSSPKTSSIDKLYIVLISLH 164