BP917828 |
Clone id |
YMU001_000106_A05 |
Library |
YMU01 |
Length |
436 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_A05. |
Accession |
BP917828 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATCAGCATGTGCATCCTGGGTCATCATGGCAACATGAAGGGAGCACTAGCAAGACAATG CGTCAGGTTGACGCCAATGTATTTGCCTCTAGAGTGTCACCTCTAAAGCCAAAAGATAAC ACTGTTGATGGTTATAGTAACATGGGGTCCCATTGTTTGGACACTTCCAGTACGATGGTA GCAGAACACCAAGTGGTGGCATCTACCCATAACGCCCGATTTGAAAGGAGGCGGCAAGAT GCTGTTTCATCACTTAATGCGGCTGTCGATGAGAAGGATGAAGGGCTAGATTTTGGAGCC CCCAGAATTTCTGACGGAGACTCTTTCGATCAAAGTGAAAGTAGAATGCGGTCACCTGAA GAACTCTACTGCACCCGTTACATGAGACATATGGAGCAGCACCATCCTTGGGTAATGGAG GATATTGAGAGAGCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FHK4 |
Definition |
sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190 OS=Arabidopsis thaliana |
Align length |
30 |
Score (bit) |
31.6 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4LZ52 |
Definition |
tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis |
Align length |
114 |
Score (bit) |
36.2 |
E-value |
0.84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917828|Adiantum capillus-veneris mRNA, clone: YMU001_000106_A05. (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis GN=GJ23294 ... 36 0.84 tr|Q1HR44|Q1HR44_AEDAE NMD protein OS=Aedes aegypti PE=2 SV=1 35 2.4 tr|Q0IGB3|Q0IGB3_AEDAE Nonsense-mediated mrna decay protein OS=A... 35 2.4 tr|A2Q4V1|A2Q4V1_MEDTR CAMP response element binding (CREB) prot... 33 5.4 tr|B4Q3Z7|B4Q3Z7_DROSI GD24306 (Fragment) OS=Drosophila simulans... 33 5.4 tr|A5DE85|A5DE85_PICGU Putative uncharacterized protein OS=Pichi... 33 5.4 tr|B4IFL5|B4IFL5_DROSE GM23396 OS=Drosophila sechellia GN=GM2339... 33 7.1 tr|B6HWD9|B6HWD9_PENCH Pc23g00890 protein OS=Penicillium chrysog... 33 7.1 tr|Q6NHV5|Q6NHV5_CORDI Putative exonuclease, SbcD-family OS=Cory... 33 9.2 tr|P93783|P93783_SACOF Sucrose-phosphate synthase OS=Saccharum o... 33 9.2 tr|A9UFX6|A9UFX6_SACOF Sucrose phosphate synthase III OS=Sacchar... 33 9.2 tr|A9UFX5|A9UFX5_SACOF Sucrose phosphate synthase III OS=Sacchar... 33 9.2 tr|A1BU63|A1BU63_9CAUD Conserved phage protein OS=Staphylococcus... 33 9.2 tr|Q4PHZ5|Q4PHZ5_USTMA Putative uncharacterized protein OS=Ustil... 33 9.2 tr|A2RB06|A2RB06_ASPNC Contig An18c0160, complete genome OS=Aspe... 33 9.2
>tr|B4LZ52|B4LZ52_DROVI GJ23294 OS=Drosophila virilis GN=GJ23294 PE=4 SV=1 Length = 1966
Score = 36.2 bits (82), Expect = 0.84 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Frame = +1
Query: 49 SKTMRQV------DANVFAS-RVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVAST 207 S MRQ+ DA F S R P D++++G+SNM S + +V A+T Sbjct: 879 SVLMRQIGPAKLDDARKFESERPKPNGTADSSMEGWSNMTVMDESKSYYRIFSAEVDANT 938
Query: 208 HNARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEELY 369 +FE+ R ++ SL+ + EG++ A SD + +++ ++ + ++ + Sbjct: 939 TEFQFEKLRHFSLYSLSVRACREREGVNDTADVCSDAEPWEKRTRKLANMDKAF 992
>tr|Q1HR44|Q1HR44_AEDAE NMD protein OS=Aedes aegypti PE=2 SV=1 Length = 510
Score = 34.7 bits (78), Expect = 2.4 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +1
Query: 40 GSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNAR 219 G + R V A+V+ + S L +NT+ S++G H L +++ A+ +NA Sbjct: 341 GQGPVSFRHVLADVWVVKASELGINENTIHTRSHLG-HLLKPGDSVMGYDLQDANINNAD 399
Query: 220 FERRRQDAVSSL 255 FE+ +QD+V L Sbjct: 400 FEKLKQDSVPDL 411
>tr|Q0IGB3|Q0IGB3_AEDAE Nonsense-mediated mrna decay protein OS=Aedes aegypti GN=AAEL003039 PE=4 SV=1 Length = 510
Score = 34.7 bits (78), Expect = 2.4 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +1
Query: 40 GSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNAR 219 G + R V A+V+ + S L +NT+ S++G H L +++ A+ +NA Sbjct: 341 GQGPVSFRHVLADVWVVKASELGINENTIHTRSHLG-HLLKPGDSVMGYDLQDANINNAD 399
Query: 220 FERRRQDAVSSL 255 FE+ +QD+V L Sbjct: 400 FEKLKQDSVPDL 411
>tr|A2Q4V1|A2Q4V1_MEDTR CAMP response element binding (CREB) protein OS=Medicago truncatula GN=MtrDRAFT_AC157891g24v2 PE=3 SV=1 Length = 476
Score = 33.5 bits (75), Expect = 5.4 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 3/138 (2%) Frame = +1
Query: 16 PGSSWQHEGSTS---KTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAE 186 P SS +HEG + K +R++ N A+R S L+ K ++ S+ + Sbjct: 171 PTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKK-----------AYIQQLESSRIKL 219
Query: 187 HQVVASTHNARFERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEEL 366 +Q+ H+AR ++G+ FG + G+ S + + S + Sbjct: 220 NQMEQELHHAR-------------------NQGMFFGGGAMLGGEQGLPSMNTISSEAAM 260
Query: 367 YCTRYMRHMEQHHPWVME 420 + Y R +E+HH V E Sbjct: 261 FDVEYARWLEEHHRLVCE 278
>tr|B4Q3Z7|B4Q3Z7_DROSI GD24306 (Fragment) OS=Drosophila simulans GN=GD24306 PE=4 SV=1 Length = 721
Score = 33.5 bits (75), Expect = 5.4 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1
Query: 268 DEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVMED 423 DE ++GL FG+ DGD + E + P+ + + H P ++ED Sbjct: 650 DEGNDGLHFGSDDDDDGDVHKEEEVEVEQPKAKKAKKAKPEKQNHRPAIVED 701
>tr|A5DE85|A5DE85_PICGU Putative uncharacterized protein OS=Pichia guilliermondii GN=PGUG_01586 PE=4 SV=2 Length = 403
Score = 33.5 bits (75), Expect = 5.4 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Frame = +1
Query: 109 PKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNARFERRRQDAVSSLNAAVDEKDEGL 288 P+ T++ SN+ D+ ++ + + V++T N ++Q+ VSS+ DE+D L Sbjct: 32 PQQTTMEELSNVIPESGDSDQVIIVDTETVSTT-NGLGSLQKQEMVSSVEPIEDEQDSDL 90
Query: 289 D-FGAPRISDGDSFDQSESRMRS---PEELYCTRYMRHMEQHHP 408 + + + S GD Q+ R S E + R + + HP Sbjct: 91 ESLNSDQESQGDQETQNPCRKVSLCVGERVVVGRASKTNAERHP 134
>tr|B4IFL5|B4IFL5_DROSE GM23396 OS=Drosophila sechellia GN=GM23396 PE=4 SV=1 Length = 764
Score = 33.1 bits (74), Expect = 7.1 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1
Query: 268 DEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVMED 423 DE ++GL FG+ DGD + E + P+ + + H P ++ED Sbjct: 693 DEGNDGLHFGSDDDDDGDVHKEEEVEVEQPKAKKVKKAKPEKQNHRPAIVED 744
>tr|B6HWD9|B6HWD9_PENCH Pc23g00890 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc23g00890 PE=4 SV=1 Length = 582
Score = 33.1 bits (74), Expect = 7.1 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 3/109 (2%) Frame = +1
Query: 103 LKPKDNTVDGYSNMGSHCLDTSSTMVAEHQVVASTHNARFERRRQDAVSSLNAAVDE--K 276 LKPK+N D S SS ++ +V++ + E + + S++ A D + Sbjct: 315 LKPKNNNPDSTKKTASFSNQVSSHIIPNSRVISRSDEDAIETDDEVSESAIGDAEDSDWE 374
Query: 277 DEGLDFGAPRISD-GDSFDQSESRMRSPEELYCTRYMRHMEQHHPWVME 420 D + G P + + G F + +SR +L R M M H P M+ Sbjct: 375 DSIAEGGEPSVDEQGGMFQRVDSR----PDLVSRRSMLTMMMHRPARMQ 419
>tr|Q6NHV5|Q6NHV5_CORDI Putative exonuclease, SbcD-family OS=Corynebacterium diphtheriae GN=DIP1025 PE=4 SV=1 Length = 373
Score = 32.7 bits (73), Expect = 9.2 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = +1
Query: 16 PGSSWQHEGSTSKTMRQVDANVFASRVSPLKPKDNTVDGYSNMGSHCLDTSSTMVAEHQV 195 P W E T DA F S ++ K+NTV Y+ G+ + T + E + Sbjct: 250 PVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTMQYLETECEK 309
Query: 196 VASTHNARFERRR 234 + A +ERRR Sbjct: 310 LRPIFAALYERRR 322
>tr|P93783|P93783_SACOF Sucrose-phosphate synthase OS=Saccharum officinarum GN=SoSPS2 PE=4 SV=1 Length = 963
Score = 32.7 bits (73), Expect = 9.2 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +1
Query: 223 ERRRQDAVSSLNAAVDEKDEGLDFGAPRISDGDSFDQSESRMRSPEELYCTRYMRH 390 E+ R DA + ++ + E ++G D G P ++ GDS S + S ++LY H Sbjct: 109 EKTRADATADMSEDLFEGEKGEDAGDPSVAYGDSTTGSSPKTSSIDKLYIVLISLH 164
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