BP917835 |
Clone id |
YMU001_000106_B03 |
Library |
YMU01 |
Length |
462 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_B03. |
Accession |
BP917835 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGATGGAGCAACATATCCTCTTTTTGGATACGCGGCTTGGCGGCTGCCCTCCCTCAGCTT GAGGAAAAATCGCTCGCAGGCTTGGTTCCTGTTGGTGTGGCGGATGCTTCAGTCTGTTGG CTCGTCGGCATGCTTAGCTCACCTGGTCTTGGTTTGATGGCTTCGGGATGTGGAGAGTCT TGCTCGGATCTGGTTTGTTGCTGAGCTGTGGGTGGGAGGTACTTATTTGACTTATGATAC ATGGATTCGGAGGGCTGTGGTGGTACCAAGTGATGGAGCTCATGGATGGGCAGTGGGCAA GTGGGAGTTGCCCTCCTCCTTGGTGGCAAACACCGCCCTGATAGGGATGAAGGATAAGCT TGCGGAGTATTCGATGCTCTCTTCGACCTCTTTTTTTATCAAGTATTATTGGCTTGTGCC ATGGGAGGATGGTTTCTTGGTGGCAGTAAGAATCTCCTATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q52KI8 |
Definition |
sp|Q52KI8|SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 OS=Mus musculus |
Align length |
158 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917835|Adiantum capillus-veneris mRNA, clone: YMU001_000106_B03. (462 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q52KI8|SRRM1_MOUSE Serine/arginine repetitive matrix protein ... 42 0.001 sp|Q64205|DLX3_MOUSE Homeobox protein DLX-3 OS=Mus musculus GN=D... 42 0.002 sp|Q6PEV3|WIPF2_MOUSE WAS/WASL-interacting protein family member... 41 0.002 sp|O60479|DLX3_HUMAN Homeobox protein DLX-3 OS=Homo sapiens GN=D... 41 0.002 sp|Q8TF74|WIPF2_HUMAN WAS/WASL-interacting protein family member... 40 0.005 sp|P14918|EXTN_MAIZE Extensin OS=Zea mays GN=HRGP PE=2 SV=1 39 0.008 sp|Q5R5Q2|SRRM1_PONAB Serine/arginine repetitive matrix protein ... 39 0.014 sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 O... 39 0.014 sp|A4RD35|SEC31_MAGGR Protein transport protein SEC31 OS=Magnapo... 38 0.018 sp|Q55CW2|SAMKC_DICDI Probable serine/threonine-protein kinase s... 38 0.018 sp|Q3MBZ7|IF2_ANAVT Translation initiation factor IF-2 OS=Anabae... 38 0.024 sp|Q8YQJ1|IF2_ANASP Translation initiation factor IF-2 OS=Anabae... 38 0.024 sp|Q9QYX7|PCLO_MOUSE Protein piccolo OS=Mus musculus GN=Pclo PE=... 37 0.041 sp|P28875|CZF1_CANAL Zinc finger protein 1 OS=Candida albicans G... 37 0.041 sp|Q5ZMJ9|SRRM1_CHICK Serine/arginine repetitive matrix protein ... 37 0.053 sp|Q0ULF5|SEC31_PHANO Protein transport protein SEC31 OS=Phaeosp... 37 0.053 sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus... 37 0.053 sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2 37 0.053 sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS... 36 0.091 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein ... 35 0.12 sp|Q9Y2H5|PKHA6_HUMAN Pleckstrin homology domain-containing fami... 35 0.12 sp|Q54VV7|Y0111_DICDI Probable serine/threonine-protein kinase D... 35 0.16 sp|O70546|UTX_MOUSE Histone demethylase UTX OS=Mus musculus GN=U... 35 0.16 sp|O15550|UTX_HUMAN Histone demethylase UTX OS=Homo sapiens GN=U... 35 0.16 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 35 0.16 sp|Q8BV57|SRCRL_MOUSE Scavenger receptor cysteine-rich domain-co... 35 0.16 sp|Q5S580|SEC31_AJECA Protein transport protein SEC31 OS=Ajellom... 35 0.20 sp|Q8BFW7|LPP_MOUSE Lipoma-preferred partner homolog OS=Mus musc... 35 0.20 sp|P24152|EXTN_SORBI Extensin OS=Sorghum bicolor GN=HRGP PE=3 SV=1 34 0.27 sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sap... 34 0.27
>sp|Q52KI8|SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 OS=Mus musculus GN=Srrm1 PE=1 SV=1 Length = 946
Score = 42.4 bits (98), Expect = 0.001 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 607 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPSPP-PKRR 653
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQDSP-HPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 654 VSHSPPPKQRSPTVTKRRSPSLSSKHRKGSS-PGRSTREARSPQPNKRHSPSPRPRAPQT 712
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + ASA+P G + S + R + P +K Sbjct: 713 SSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKK 750
Score = 35.0 bits (79), Expect = 0.16 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2
Query: 395 KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCP-LPIHELHHLVPPQPSESMYHKSNKY 219 KK KR S+ P+ LS PPRRR P+ P P + H PQ S + KS Sbjct: 370 KKPPKRTSSPPRK-TRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQS-NRTRKSRVS 427
Query: 218 LPP------TAQQQTRSEQDSPHPEAIKPRPGELS 132 + P + + +++SP P A KPR ELS Sbjct: 428 VSPGRTSGKVTKHKGTEKRESPSP-APKPRKVELS 461
>sp|Q64205|DLX3_MOUSE Homeobox protein DLX-3 OS=Mus musculus GN=Dlx3 PE=2 SV=1 Length = 287
Score = 41.6 bits (96), Expect = 0.002 Identities = 27/93 (29%), Positives = 41/93 (44%) Frame = -3
Query: 313 GQLPLAHCPSMSSITWYHHSPPNPCIISQISTSHPQLSNKPDPSKTLHIPKPSNQDQVS* 134 G++PL H P+ S + +SPP+P + S S P + P P + P+ D + Sbjct: 191 GEVPLEHSPNNSD-SMACNSPPSPALWDTSSHSTPAPARNPLPPPLPYSASPNYLDDPTN 249
Query: 133 ACRRANRLKHPPHQQEPSLRAIFPQAEGGQPPS 35 + L P QQ+P A A G PP+ Sbjct: 250 SWYHTQNLSGPHLQQQPPQPATLHHASPGPPPN 282
>sp|Q6PEV3|WIPF2_MOUSE WAS/WASL-interacting protein family member 2 OS=Mus musculus GN=Wipf2 PE=2 SV=1 Length = 440
Score = 41.2 bits (95), Expect = 0.002 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = -2
Query: 389 RSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPP 210 R AS T + SS P RR P PLP+H +++ + K LPP Sbjct: 161 RPNTASGTGMKHSSSAPPPPPPGRRANAPPTPLPLHS---------NKAQAYNREKPLPP 211
Query: 209 TAQQQTRSEQDS-PHPEAIKPRPGELSMPTSQQTEASATP 93 T Q+ ++ P P +KP P +++ T ++ A P Sbjct: 212 TPGQRLHPGREGHPAPPPVKPPPSPVNIRTGPSGQSLAPP 251
>sp|O60479|DLX3_HUMAN Homeobox protein DLX-3 OS=Homo sapiens GN=DLX3 PE=2 SV=1 Length = 287
Score = 41.2 bits (95), Expect = 0.002 Identities = 28/93 (30%), Positives = 41/93 (44%) Frame = -3
Query: 313 GQLPLAHCPSMSSITWYHHSPPNPCIISQISTSHPQLSNKPDPSKTLHIPKPSNQDQVS* 134 G++PL H P+ S + +SPP+P + S S P + P + PS D + Sbjct: 191 GEVPLEHSPNNSD-SMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSASPSYLDDPTN 249
Query: 133 ACRRANRLKHPPHQQEPSLRAIFPQAEGGQPPS 35 + A L P QQ+P A A G PP+ Sbjct: 250 SWYHAQNLSGPHLQQQPPQPATLHHASPGPPPN 282
>sp|Q8TF74|WIPF2_HUMAN WAS/WASL-interacting protein family member 2 OS=Homo sapiens GN=WIPF2 PE=1 SV=1 Length = 440
Score = 40.0 bits (92), Expect = 0.005 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = -2
Query: 389 RSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPP 210 R S+T + SS P RR P PLP+H S++ + K LPP Sbjct: 161 RPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHS---------SKAPAYNREKPLPP 211
Query: 209 TAQQQTRSEQDSPH-PEAIKPRPGELSMPTSQQTEASATP 93 T Q+ ++ P P +KP P +++ T ++ A P Sbjct: 212 TPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPP 251
>sp|P14918|EXTN_MAIZE Extensin OS=Zea mays GN=HRGP PE=2 SV=1 Length = 267
Score = 39.3 bits (90), Expect = 0.008 Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 2/124 (1%) Frame = -2
Query: 386 SKRASNTPQAYPSSLSGRCLPPRRRATPTC--PLPIHELHHLVPPQPSESMYHKSNKYLP 213 S+R S TP Y S PP + TP P P P+P+ Y S K P Sbjct: 11 SRRYSLTPPTYTPSPK----PPTPKPTPPTYTPSPKPPASKPPTPKPTPPTYTPSPK--P 64
Query: 212 PTAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKPASDFSSS*GRAAAKP 33 PT + + SP P A KP + + PT + TP T P ++ S A KP Sbjct: 65 PTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPPT--YTPSPKPPATKP 122
Query: 32 RIQK 21 K Sbjct: 123 PTPK 126
Score = 37.4 bits (85), Expect = 0.031 Identities = 26/97 (26%), Positives = 38/97 (39%) Frame = -2
Query: 368 TPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQTR 189 TP+ P + + PP + TP P + PP P + + PPT + Sbjct: 50 TPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPP 109
Query: 188 SEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKP 78 + SP P A KP + + PT + TP T P Sbjct: 110 TYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPP 146
Score = 35.8 bits (81), Expect = 0.091 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Frame = -2
Query: 368 TPQAYPSSLSGRCLPPRRRATPTCPLP-----IHELHHLVPPQPSESMYHKSNKYLPPTA 204 TP+ P + + PP + TP P H PP + S + K PPT Sbjct: 140 TPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPPTPKPTPPTY 199
Query: 203 QQQTRSEQDSPHPEAI--KPRPGELSMPTSQQTEASATPTGTKPAS 72 + P P P+P PT + T + TPT PA+ Sbjct: 200 TPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPTPKPPAT 245
Score = 33.9 bits (76), Expect = 0.35 Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Frame = -2
Query: 368 TPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQP-------SESMYHKSNKYLPP 210 TP+ P + + PP + TP P + PP P + S + K PP Sbjct: 87 TPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPP 146
Query: 209 TAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKP 78 T + P P P P + PT + T + TP+ P Sbjct: 147 TYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPP 190
Score = 32.3 bits (72), Expect = 1.0 Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 1/129 (0%) Frame = -2
Query: 461 NRRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAY-PSSLSGRCLPPRRRATPTCPLPI 285 +RR+ L P + P + TP Y PS PP + TP P Sbjct: 11 SRRYSLTPPTYTP---------SPKPPTPKPTPPTYTPSPKPPASKPPTPKPTPPTYTPS 61
Query: 284 HELHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEA 105 + P P+ + K PPT + + SP P KP P + Sbjct: 62 PKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATK 121
Query: 104 SATPTGTKP 78 TP T P Sbjct: 122 PPTPKPTPP 130
Score = 32.0 bits (71), Expect = 1.3 Identities = 28/98 (28%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Frame = -2
Query: 368 TPQAY-PSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQT 192 TP Y PS PP + TP P + P P+ + K PPT + Sbjct: 70 TPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTP 129
Query: 191 RSEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKP 78 + SP P KP P PT + TP T P Sbjct: 130 PTYTPSPKPPTPKPTP-----PTYTPSPKPPTPKPTPP 162
>sp|Q5R5Q2|SRRM1_PONAB Serine/arginine repetitive matrix protein 1 OS=Pongo abelii GN=SRRM1 PE=2 SV=1 Length = 917
Score = 38.5 bits (88), Expect = 0.014 Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 602 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPS-PPPKRR 648
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQ-DSPHPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 649 VSHSPPPKQRSSPVTKRRSPSLSSKHRKGS-SPSRSTREARSPQPNKRHSPSPRPRAPQT 707
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + AS++P + S + R + P +K Sbjct: 708 SSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK 745
Score = 34.3 bits (77), Expect = 0.27 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2
Query: 395 KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCP-LPIHELHHLVPPQPSESMYHKSNKY 219 KK KR S+ P+ LS PPRRR P+ P P + H PQ S + KS Sbjct: 372 KKPPKRTSSPPRK-TRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS-NRTRKSRVS 429
Query: 218 LPP------TAQQQTRSEQDSPHPEAIKPRPGELS 132 + P + + +++SP P A KPR ELS Sbjct: 430 VSPGRTSGKVTKHKGTEKRESPSP-APKPRKVELS 463
Score = 29.6 bits (65), Expect = 6.5 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 5/129 (3%) Frame = -2
Query: 389 RSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVP----PQPSESMYHKSNK 222 R +R+ + P PPRRR TPT P P P P P + Sbjct: 559 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPT-PPPRRRTPSPPPRRRSPSPRRYSPPIQRR 617
Query: 221 YLP-PTAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKPASDFSSS*GRA 45 Y P P +++T S P A P + + S + ++P + + SS + Sbjct: 618 YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKG 677
Query: 44 AAKPRIQKE 18 ++ R +E Sbjct: 678 SSPSRSTRE 686
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1 PE=1 SV=4 Length = 2555
Score = 38.5 bits (88), Expect = 0.014 Identities = 25/93 (26%), Positives = 36/93 (38%) Frame = -2
Query: 359 AYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQ 180 A P+SL +PP A P H V PS + + +L P+ + + Sbjct: 2463 ALPTSLPSSLVPPVTAAQFLTPPSQHSYSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSS 2522
Query: 179 DSPHPEAIKPRPGELSMPTSQQTEASATPTGTK 81 SPH G S PTS Q++ + P K Sbjct: 2523 SSPHSNVSDWSEGVSSPPTSMQSQIARIPEAFK 2555
>sp|A4RD35|SEC31_MAGGR Protein transport protein SEC31 OS=Magnaporthe grisea GN=SEC31 PE=3 SV=1 Length = 1269
Score = 38.1 bits (87), Expect = 0.018 Identities = 39/159 (24%), Positives = 53/159 (33%), Gaps = 23/159 (14%) Frame = -2
Query: 440 PRNHPPMAQANNT**KKRSKRASNT---PQAYPSSLSGRCLPPRRRATPT---------- 300 P PP A + + AS+T P P G PP R A+P Sbjct: 991 PLTSPPQAGYGGAAPPRPASAASSTYAPPPPAPGQSFGMNAPPARTASPYSVAPAAPPPS 1050
Query: 299 ---CPLPIHELHH-------LVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKP 150 P P + +PP P+ S +N Y Q Q +P P P Sbjct: 1051 NRYAPSPAMQQQQGGPGPAGSMPPPPAMSRPPPTNPYAAAPQQSPAPGGQYAPSPYGAPP 1110
Query: 149 RPGELSMPTSQQTEASATPTGTKPASDFSSS*GRAAAKP 33 + G+ M ++ P G P S + RAAA P Sbjct: 1111 QAGQPPMAPPPSSQVGPPPGGRGPLSTPTPPPPRAAAAP 1149
>sp|Q55CW2|SAMKC_DICDI Probable serine/threonine-protein kinase samkC OS=Dictyostelium discoideum GN=samkC PE=3 SV=2 Length = 875
Score = 38.1 bits (87), Expect = 0.018 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 10/113 (8%) Frame = -2
Query: 365 PQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYH------KSNKYLPPTA 204 PQ P + + P ++ P P L P+PS+S K N PP++ Sbjct: 470 PQPKPQTSQSKPKPSSSLSSSELP-PQPPLESQSKPKPSQSKTQPTQPQSKLNPSSPPSS 528
Query: 203 QQQTRSEQDSPHPEAIKPRP-GELSM---PTSQQTEASATPTGTKPASDFSSS 57 + SE P P KP+P LS P Q + + + KP+S SSS Sbjct: 529 SSSSLSEPPKPQPSQSKPKPSSSLSSEPPPLEPQPKPQTSQSKPKPSSSLSSS 581
Score = 35.0 bits (79), Expect = 0.16 Identities = 34/137 (24%), Positives = 51/137 (37%), Gaps = 17/137 (12%) Frame = -2
Query: 443 PPRNHPPMAQANNT**KKRSKRASNTP---QAYPSSLS----GRCLPPRRRATPTCPLPI 285 PP P Q + + K S +S+ P + P+ S + P ++ PT P P Sbjct: 557 PPLEPQPKPQTSQSKPKPSSSLSSSEPPPLEPQPTQSSKPQPSQSKPQPIQSQPTQPQPT 616
Query: 284 HELHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPE---------AIKPRPGE-L 135 PQ + + + QQQ + +Q PE KP+PG+ L Sbjct: 617 QPKSSKQQPQSKQQQQQQQQQQQQQQQQQQQQQQQQKSKPEQSKSKPEQSQSKPQPGQPL 676
Query: 134 SMPTSQQTEASATPTGT 84 P+ Q S T T T Sbjct: 677 QSPSKPQPIPSTTKTTT 693
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O49870 |
Definition |
tr|O49870|O49870_HORVU Extensin (Fragment) OS=Hordeum vulgare |
Align length |
129 |
Score (bit) |
47.8 |
E-value |
0.0003 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917835|Adiantum capillus-veneris mRNA, clone: YMU001_000106_B03. (462 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O49870|O49870_HORVU Extensin (Fragment) OS=Hordeum vulgare GN... 48 3e-04 tr|Q41719|Q41719_ZEADI Hydroxyproline-rich glycoprotein OS=Zea d... 44 0.005 tr|B3M9H4|B3M9H4_DROAN GF10891 (Fragment) OS=Drosophila ananassa... 43 0.007 tr|B2RYB3|B2RYB3_RAT Srrm1 protein OS=Rattus norvegicus GN=Srrm1... 42 0.012 tr|A2A8W1|A2A8W1_MOUSE Serine/arginine repetitive matrix 1 (Frag... 42 0.012 tr|A2A8V9|A2A8V9_MOUSE Serine/arginine repetitive matrix 1 OS=Mu... 42 0.012 tr|A2A8V8|A2A8V8_MOUSE Serine/arginine repetitive matrix 1 OS=Mu... 42 0.012 tr|Q9VV52|Q9VV52_DROME CG4877, isoform A OS=Drosophila melanogas... 42 0.012 tr|Q95RV6|Q95RV6_DROME LD09503p OS=Drosophila melanogaster GN=CG... 42 0.012 tr|B4PTW1|B4PTW1_DROYA GE24823 OS=Drosophila yakuba GN=GE24823 P... 42 0.012 tr|Q2GQR2|Q2GQR2_CHAGB Putative uncharacterized protein OS=Chaet... 42 0.012 tr|A8Q643|A8Q643_MALGO Putative uncharacterized protein OS=Malas... 42 0.012 tr|Q4SH61|Q4SH61_TETNG Chromosome 8 SCAF14587, whole genome shot... 42 0.015 tr|B0XBT4|B0XBT4_CULQU Putative uncharacterized protein OS=Culex... 42 0.015 tr|A7SQQ5|A7SQQ5_NEMVE Predicted protein OS=Nematostella vectens... 42 0.015 tr|Q9QWH3|Q9QWH3_MOUSE Homeodomain protein Dlx-3 (Fragment) OS=M... 42 0.020 tr|Q78ZZ8|Q78ZZ8_MOUSE Distal-less homeo box 3 OS=Mus musculus G... 42 0.020 tr|A2VDN3|A2VDN3_BOVIN Distal-less homeobox 3 OS=Bos taurus GN=D... 41 0.026 tr|A2T7W5|A2T7W5_PONPY DLX3 (Fragment) OS=Pongo pygmaeus GN=DLX3... 41 0.026 tr|A2T7A8|A2T7A8_PANTR DLX3 (Fragment) OS=Pan troglodytes GN=DLX... 41 0.026 tr|A2D5A7|A2D5A7_HYLKL DLX3 (Fragment) OS=Hylobates klossii GN=D... 41 0.026 tr|A1YGE5|A1YGE5_PANPA DLX3 (Fragment) OS=Pan paniscus GN=DLX3 P... 41 0.026 tr|B3KQL6|B3KQL6_HUMAN cDNA FLJ90686 fis, clone PLACE1006079, hi... 41 0.026 tr|B2R870|B2R870_HUMAN cDNA, FLJ93763, highly similar to Homo sa... 41 0.026 tr|B2AZ52|B2AZ52_PODAN Predicted CDS Pa_3_4150 (Fragment) OS=Pod... 41 0.026 tr|Q4SUS1|Q4SUS1_TETNG Chromosome undetermined SCAF13844, whole ... 41 0.034 tr|B8LNU9|B8LNU9_PICSI Putative uncharacterized protein OS=Picea... 41 0.034 tr|A5B640|A5B640_VITVI Putative uncharacterized protein OS=Vitis... 41 0.034 tr|A2D521|A2D521_ATEGE DLX3 (Fragment) OS=Ateles geoffroyi GN=DL... 41 0.034 tr|A1YFP8|A1YFP8_SAGLB DLX3 (Fragment) OS=Saguinus labiatus GN=D... 41 0.034
>tr|O49870|O49870_HORVU Extensin (Fragment) OS=Hordeum vulgare GN=ex1 PE=2 SV=1 Length = 330
Score = 47.8 bits (112), Expect = 3e-04 Identities = 37/129 (28%), Positives = 50/129 (38%), Gaps = 2/129 (1%) Frame = -2
Query: 443 PPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLV 264 PP+ H P ++ + S P Y PP + TP P P + + Sbjct: 29 PPKGHKPPHHHHHA----KPPVGSQAPPTYS--------PPTAKPTPPAPKPAPPTYAPI 76
Query: 263 P--PQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEASATPT 90 P P+PS YH + K PPT + T Q P P A KP P P + + +P Sbjct: 77 PKPPKPSPPAYHPTPKPAPPTYKPPT---QPKPSPPAYKPAP--KVSPPAYKPAPKVSPP 131
Query: 89 GTKPASDFS 63 KPA S Sbjct: 132 AYKPAPKVS 140
Score = 38.5 bits (88), Expect = 0.17 Identities = 25/82 (30%), Positives = 34/82 (41%) Frame = -2
Query: 323 PRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKPRP 144 P+ P P H HH PP S++ Y PPTA+ + + +P A P+P Sbjct: 24 PKHEKPPKGHKPPHHHHHAKPPVGSQA----PPTYSPPTAKPTPPAPKPAPPTYAPIPKP 79
Query: 143 GELSMPTSQQTEASATPTGTKP 78 + S P T A PT P Sbjct: 80 PKPSPPAYHPTPKPAPPTYKPP 101
>tr|Q41719|Q41719_ZEADI Hydroxyproline-rich glycoprotein OS=Zea diploperennis GN=HRGP PE=3 SV=1 Length = 350
Score = 43.5 bits (101), Expect = 0.005 Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 3/125 (2%) Frame = -2
Query: 443 PPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLV 264 PP+ H P + K + +P+ P + + PP + TP P H Sbjct: 62 PPKEHGPKPEKPPKEHKPTPPTYTPSPKPTPPTYTPTPTPPTPKPTPPTYTPAPTPHKPT 121
Query: 263 P---PQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKPRPGELSMPTSQQTEASATP 93 P P P+ Y S K PPT + + SP P A KP + + PT + TP Sbjct: 122 PTPKPTPTPPTYTPSPK--PPTPKPTPPTYAPSPKPPATKPPTPKPTPPTYTPSPKPPTP 179
Query: 92 TGTKP 78 T P Sbjct: 180 KPTPP 184
Score = 35.0 bits (79), Expect = 1.9 Identities = 26/97 (26%), Positives = 37/97 (38%) Frame = -2
Query: 368 TPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQTR 189 +P+ P + + PP + TP P + PP P + + PPT + Sbjct: 189 SPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPP 248
Query: 188 SEQDSPHPEAIKPRPGELSMPTSQQTEASATPTGTKP 78 + SP P A KP P PT + TP T P Sbjct: 249 TYTPSPKPPATKPTP-----PTYTPSPKPPTPKPTPP 280
Score = 34.3 bits (77), Expect = 3.2 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Frame = -2
Query: 368 TPQAY-PSSLSGRCLPPRRRATPTCPLPIHELHHLVPPQPSESMYHKSNKYLPPTAQQQT 192 TP Y PS PP + TP P + P+P+ Y S K PPT Sbjct: 145 TPPTYAPSPKPPATKPPTPKPTPPTYTPSPKPP---TPKPTPPTYTPSPKPTPPTYTPSP 201
Query: 191 RSEQDSPHPEAI--KPRPGELSMPTSQQTEASATPTGTKP 78 + P P P+P PT + T + TP+ P Sbjct: 202 KPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPP 241
Score = 34.3 bits (77), Expect = 3.2 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 11/110 (10%) Frame = -2
Query: 368 TPQAYPSSLSGRCLPPRRRATPTCPLPIHELHHLVPP--QPSESMYHKSNKYLPPTAQQQ 195 TP+ P + + PP + TP P + PP +P+ Y S K PPT + Sbjct: 226 TPKPTPPTYTPSPKPPTPKPTPPTYTPSPK-----PPATKPTPPTYTPSPK--PPTPKPT 278
Query: 194 TRSEQDSPHPEAIK---------PRPGELSMPTSQQTEASATPTGTKPAS 72 + SP P K P+P PT + T + TPT PA+ Sbjct: 279 PPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPTPKPPAT 328
>tr|B3M9H4|B3M9H4_DROAN GF10891 (Fragment) OS=Drosophila ananassae GN=GF10891 PE=4 SV=1 Length = 1324
Score = 43.1 bits (100), Expect = 0.007 Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 10/113 (8%) Frame = -2
Query: 383 KRASNTPQAYPSSLSGRCLPPRR--RATPTCPLPIHELHHLVPPQP--SESMYHKS--NK 222 K+ + Y SS+S P + T P + P P S+S YH+ + Sbjct: 260 KQPRSQESDYNSSMSPSTPNPHSPYQQPQTSPYTTPQQSQSTQPSPFHSQSPYHQQQHSP 319
Query: 221 YLPPTAQQQTRSEQDS----PHPEAIKPRPGELSMPTSQQTEASATPTGTKPA 75 Y PP AQQQ S+Q S H +A P P + P S TP PA Sbjct: 320 YHPPAAQQQQSSQQSSHSPAAHQQAHSPMPSSVDSPASSAATQPPTPLAQSPA 372
>tr|B2RYB3|B2RYB3_RAT Srrm1 protein OS=Rattus norvegicus GN=Srrm1 PE=2 SV=1 Length = 908
Score = 42.4 bits (98), Expect = 0.012 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 592 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPSPP-PKRR 638
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQDSP-HPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 639 VSHSPPPKQRSPPVTKRRSPSLSSKHRKGSS-PGRSTREARSPQPNKRHSPSPRPRAPQT 697
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + ASA+P G + S + R + P +K Sbjct: 698 SSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKK 735
Score = 35.0 bits (79), Expect = 1.9 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2
Query: 395 KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCP-LPIHELHHLVPPQPSESMYHKSNKY 219 KK KR S+ P+ LS PPRRR P+ P P + H PQ S + KS Sbjct: 370 KKPPKRTSSPPRK-TRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQS-NRARKSRVS 427
Query: 218 LPP------TAQQQTRSEQDSPHPEAIKPRPGELS 132 + P + + +++SP P A KPR ELS Sbjct: 428 VSPGRTSGKVTKHKGTEKRESPSP-APKPRKVELS 461
>tr|A2A8W1|A2A8W1_MOUSE Serine/arginine repetitive matrix 1 (Fragment) OS=Mus musculus GN=Srrm1 PE=4 SV=1 Length = 317
Score = 42.4 bits (98), Expect = 0.012 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 52 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPSPP-PKRR 98
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQDSP-HPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 99 VSHSPPPKQRSPTVTKRRSPSLSSKHRKGSS-PGRSTREARSPQPNKRHSPSPRPRAPQT 157
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + ASA+P G + S + R + P +K Sbjct: 158 SSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKK 195
>tr|A2A8V9|A2A8V9_MOUSE Serine/arginine repetitive matrix 1 OS=Mus musculus GN=Srrm1 PE=4 SV=1 Length = 918
Score = 42.4 bits (98), Expect = 0.012 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 602 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPSPP-PKRR 648
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQDSP-HPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 649 VSHSPPPKQRSPTVTKRRSPSLSSKHRKGSS-PGRSTREARSPQPNKRHSPSPRPRAPQT 707
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + ASA+P G + S + R + P +K Sbjct: 708 SSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKK 745
Score = 35.0 bits (79), Expect = 1.9 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2
Query: 395 KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCP-LPIHELHHLVPPQPSESMYHKSNKY 219 KK KR S+ P+ LS PPRRR P+ P P + H PQ S + KS Sbjct: 365 KKPPKRTSSPPRK-TRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQS-NRTRKSRVS 422
Query: 218 LPP------TAQQQTRSEQDSPHPEAIKPRPGELS 132 + P + + +++SP P A KPR ELS Sbjct: 423 VSPGRTSGKVTKHKGTEKRESPSP-APKPRKVELS 456
>tr|A2A8V8|A2A8V8_MOUSE Serine/arginine repetitive matrix 1 OS=Mus musculus GN=Srrm1 PE=4 SV=1 Length = 909
Score = 42.4 bits (98), Expect = 0.012 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Frame = -2
Query: 458 RRFLLPPRNHPPMAQANNT**KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCPLPIHE 279 RR P R PP+ + + + + AS P PP+RRA+P+ P P Sbjct: 593 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP------------PPKRRASPSPP-PKRR 639
Query: 278 LHHLVPPQ-----------PSESMYHKSNKYLPPTAQQQTRSEQDSP-HPEAIKPRPGEL 135 + H PP+ PS S H+ P + ++ RS Q + H + +PR + Sbjct: 640 VSHSPPPKQRSPTVTKRRSPSLSSKHRKGSS-PGRSTREARSPQPNKRHSPSPRPRAPQT 698
Query: 134 SMPTSQQTEASATPTGTKPASDFSSS*GRAAAKPRIQK 21 S P + ASA+P G + S + R + P +K Sbjct: 699 SSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKK 736
Score = 35.0 bits (79), Expect = 1.9 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2
Query: 395 KKRSKRASNTPQAYPSSLSGRCLPPRRRATPTCP-LPIHELHHLVPPQPSESMYHKSNKY 219 KK KR S+ P+ LS PPRRR P+ P P + H PQ S + KS Sbjct: 370 KKPPKRTSSPPRK-TRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQS-NRTRKSRVS 427
Query: 218 LPP------TAQQQTRSEQDSPHPEAIKPRPGELS 132 + P + + +++SP P A KPR ELS Sbjct: 428 VSPGRTSGKVTKHKGTEKRESPSP-APKPRKVELS 461
>tr|Q9VV52|Q9VV52_DROME CG4877, isoform A OS=Drosophila melanogaster GN=CG4877 PE=1 SV=3 Length = 1117
Score = 42.4 bits (98), Expect = 0.012 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = -2
Query: 326 PPRRRATPTCPLPIHE---LHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAI 156 PP++RA P P + H+ PPQ + + L PT Q +Q +P P+ + Sbjct: 578 PPQQRAPPQQLAPPQQRAPTQHMAPPQ-----HMAPPQQLAPTQQLAPPPQQLAPRPQQL 632
Query: 155 KPRPGELSMPTSQQTEASATPTGTKPAS 72 P P +L+ P Q P ++PAS Sbjct: 633 APPPQQLAPPPQQLAPPPQQPDSSRPAS 660
>tr|Q95RV6|Q95RV6_DROME LD09503p OS=Drosophila melanogaster GN=CG4877 PE=1 SV=1 Length = 1177
Score = 42.4 bits (98), Expect = 0.012 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = -2
Query: 326 PPRRRATPTCPLPIHE---LHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAI 156 PP++RA P P + H+ PPQ + + L PT Q +Q +P P+ + Sbjct: 638 PPQQRAPPQQLAPPQQRAPTQHMAPPQ-----HMAPPQQLAPTQQLAPPPQQLAPRPQQL 692
Query: 155 KPRPGELSMPTSQQTEASATPTGTKPAS 72 P P +L+ P Q P ++PAS Sbjct: 693 APPPQQLAPPPQQLAPPPQQPDSSRPAS 720
>tr|B4PTW1|B4PTW1_DROYA GE24823 OS=Drosophila yakuba GN=GE24823 PE=4 SV=1 Length = 477
Score = 42.4 bits (98), Expect = 0.012 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -2
Query: 296 PLPIHE-LHHLVPPQPSESMYHKSNKYLPPTAQQQTRSEQDSPHPEAIKPRPGELSMPTS 120 PLPI E + L PP P E + + + PPT++ + E S E ++P+P E P Sbjct: 269 PLPIEESVAELEPPAPQEHLVIPAPEPEPPTSESEESDELLSSEEEVLEPQPEEEMGPPP 328
Query: 119 QQTEASATPTGTK 81 Q+ P G+K Sbjct: 329 QERPPQERPPGSK 341
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