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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917842
Clone id YMU001_000106_C01
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACAATGACCACGCAGGCCCTCAAAATCCATGATGTGGTAAGCAGCTAAATCTTTGGCTT
GGAACCATTCCAAACTACTGAGATCTATTCATTATACATGACAGCAGCCTCTTAAGATTC
GATCTAAACCCAACCAATCAGAACCTTTACAGCTCCTCCTCCAGTGATCCCGTAAATGTC
ATTACCATAATTAACTTGTTCTGTATGAAACATGGCTCTATTTGGAGCCAACTTTCATAA
CTCAGCGTATTCACCTTCATCCAATCAAATAATGTCTCCAATCATGCAGCCTCCATTCAG
GTGCCGCCTCTGCAATGATAGTCCAGATTCCACGGACAACCCATACAATTAAGGGATCAT
CCAAGCTATAAACTCCATTTATGGTGTGCATAAACTTTCAGATGTGTAAAACGATGCCTC
AAAACCAACATCAGCAAAATGAATCTGAATATCGTTGTAAAACCTCAGGGGTCAATTTTG
CAGGGAGAGGCAGAGGTGACTTCAACGCTCTGGCTCTCA
■■Homology search results ■■ -
sp_hit_id Q9JLI3
Definition sp|Q9JLI3|MMEL1_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus musculus
Align length 43
Score (bit) 33.5
E-value 0.61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917842|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_C01.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JLI3|MMEL1_MOUSE Membrane metallo-endopeptidase-like 1 OS=M...    33   0.61 
sp|Q495T6|MMEL1_HUMAN Membrane metallo-endopeptidase-like 1 OS=H...    33   1.0  
sp|Q5BAX7|SMP3_EMENI GPI mannosyltransferase 4 OS=Emericella nid...    32   1.8  
sp|Q9NYA4|MTMR4_HUMAN Myotubularin-related protein 4 OS=Homo sap...    30   5.2  
sp|A1JHV9|LIGB_YERE8 DNA ligase B OS=Yersinia enterocolitica ser...    30   8.8  

>sp|Q9JLI3|MMEL1_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus
           musculus GN=Mmel1 PE=1 SV=1
          Length = 765

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPFRCRLCNDSPDS 331
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF      D P S
Sbjct: 548 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF---FSKDQPQS 587


>sp|Q495T6|MMEL1_HUMAN Membrane metallo-endopeptidase-like 1 OS=Homo
           sapiens GN=MMEL1 PE=2 SV=2
          Length = 779

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPF 298
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF
Sbjct: 562 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF 593


>sp|Q5BAX7|SMP3_EMENI GPI mannosyltransferase 4 OS=Emericella
           nidulans GN=smp3 PE=3 SV=1
          Length = 530

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -3

Query: 418 GIVLHI*KFMHTINGVYSLDDPLIVWVVRGIWTIIAEAAPEWRLHD 281
           G+ + + K+ +T  G  S    L+ +VVRG+  +++    +W +HD
Sbjct: 67  GVPISLLKWFYTETGTESPPAELVYYVVRGVMFLLSFVLEDWAVHD 112


>sp|Q9NYA4|MTMR4_HUMAN Myotubularin-related protein 4 OS=Homo
           sapiens GN=MTMR4 PE=2 SV=1
          Length = 1195

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 194 TCSV*NMALFG-ANFHNSAYSPSSNQIMSPI 283
           TCSV  +   G  NFHN  Y+PSS+ ++ P+
Sbjct: 527 TCSVWALLRAGNKNFHNFLYTPSSDMVLHPV 557


>sp|A1JHV9|LIGB_YERE8 DNA ligase B OS=Yersinia enterocolitica
           serotype O:8 / biotype 1B (strain 8081) GN=ligB PE=3
           SV=1
          Length = 565

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 233 FHNSAYSPSSNQIMSPIMQPPFRCRLCNDSPDSTDN 340
           +H    SP ++ I   +     R RLC   PD TDN
Sbjct: 53  YHQQGISPIADDIYDQLQDKLHRWRLCLGLPDKTDN 88
tr_hit_id B2RPX5
Definition tr|B2RPX5|B2RPX5_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 43
Score (bit) 33.5
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917842|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_C01.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2RPX5|B2RPX5_MOUSE Putative uncharacterized protein OS=Mus m...    33   6.5  
tr|B1AS17|B1AS17_MOUSE Membrane metallo-endopeptidase-like 1 OS=...    33   6.5  
tr|B1AS16|B1AS16_MOUSE Membrane metallo-endopeptidase-like 1 OS=...    33   6.5  
tr|B1AS15|B1AS15_MOUSE Membrane metallo-endopeptidase-like 1 OS=...    33   6.5  
tr|Q6FQR2|Q6FQR2_CANGA Similar to uniprot|P32863 Saccharomyces c...    33   8.5  

>tr|B2RPX5|B2RPX5_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Mmel1 PE=2 SV=1
          Length = 742

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPFRCRLCNDSPDS 331
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF      D P S
Sbjct: 525 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF---FSKDQPQS 564


>tr|B1AS17|B1AS17_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus
           musculus GN=Mmel1 PE=4 SV=1
          Length = 782

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPFRCRLCNDSPDS 331
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF      D P S
Sbjct: 563 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF---FSKDQPQS 602


>tr|B1AS16|B1AS16_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus
           musculus GN=Mmel1 PE=4 SV=1
          Length = 745

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPFRCRLCNDSPDS 331
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF      D P S
Sbjct: 526 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF---FSKDQPQS 565


>tr|B1AS15|B1AS15_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus
           musculus GN=Mmel1 PE=4 SV=1
          Length = 768

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 NMALFGANFHNSAYSPSSNQIMSP--IMQPPFRCRLCNDSPDS 331
           N+ + GA   N+ YSP+ NQI+ P  I+QPPF      D P S
Sbjct: 549 NLWIIGAAVVNAFYSPNRNQIVFPAGILQPPF---FSKDQPQS 588


>tr|Q6FQR2|Q6FQR2_CANGA Similar to uniprot|P32863 Saccharomyces
           cerevisiae YGL163c RAD54 OS=Candida glabrata
           GN=CAGL0I04224g PE=4 SV=1
          Length = 942

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 327 IPRTTHTIKGSSKL*TPFMVCINFQMCKTMPQNQHQQNESEYRCKTSGVNFAG 485
           +PR  +  +  SKL  PF V +  Q  +T+P N     + + R ++  V++AG
Sbjct: 23  VPRPINVDESISKLTKPFKVPVKSQRSQTVPANSDLSRQRQLRQRSQTVSYAG 75