BP917849 |
Clone id |
YMU001_000106_C11 |
Library |
YMU01 |
Length |
350 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_C11. |
Accession |
BP917849 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL300Contig1 |
Sequence |
ATGTATACATGTGTGAACGAGGACGCATTAAGGGGCTTGCAGTGGGTGATAGCACCTCAT CAAGTAACGCTTTGAGCTTTTTCGCATTCAGTAGCGCCTTCCTTCCGGCGATTCGGAACT TCTTTGCCATCCTTGAACACAATAAGAGTAGGCAATCCATACACGTCATACTCTTTCACT AAATTTGGGCTTGTAGCTACATCAATCTTCACAGCTTTCAAAGACCCATTGAAATCCTTG GCAACAGAATCGATGACAGGGCCAATGAGCTTGCAGGGACCACACCAATCAGCACAGAAG CCAACAAGAACGGGGCATTCAGATTTGAGAACTTCATCGGGAAAACTATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LD49 |
Definition |
sp|Q8LD49|TRXX_ARATH Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana |
Align length |
84 |
Score (bit) |
97.4 |
E-value |
2.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917849|Adiantum capillus-veneris mRNA, clone: YMU001_000106_C11. (350 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8LD49|TRXX_ARATH Thioredoxin-X, chloroplastic OS=Arabidopsis... 97 2e-20 sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis GN=trxA PE=... 89 5e-18 sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamy... 89 9e-18 sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii GN=trxA P... 88 1e-17 sp|Q9X2T1|THIO_PSEAE Thioredoxin OS=Pseudomonas aeruginosa GN=tr... 88 1e-17 sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE... 88 1e-17 sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PC... 88 1e-17 sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (... 87 3e-17 sp|P0A4L1|THIO1_ANASP Thioredoxin-1 OS=Anabaena sp. (strain PCC ... 87 3e-17 sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC ... 87 3e-17 sp|P96132|THIO_THIRO Thioredoxin (Fragment) OS=Thiocapsa roseope... 86 4e-17 sp|P50254|THIO_PORYE Thioredoxin OS=Porphyra yezoensis GN=trxA P... 86 4e-17 sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN... 85 1e-16 sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA ... 84 2e-16 sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium GN=... 84 2e-16 sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA P... 84 2e-16 sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K... 84 2e-16 sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6 GN=trx... 84 2e-16 sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 G... 84 2e-16 sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA ... 83 4e-16 sp|Q9ZP20|TRXM_ORYSJ Thioredoxin M-type, chloroplastic OS=Oryza ... 83 5e-16 sp|Q9SEU6|TRXM4_ARATH Thioredoxin M-type 4, chloroplastic OS=Ara... 83 5e-16 sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi GN=trxA PE=... 83 5e-16 sp|Q9ZEE0|THIO_RICPR Thioredoxin OS=Rickettsia prowazekii GN=trx... 82 6e-16 sp|O22022|THIO_CYAME Thioredoxin OS=Cyanidioschyzon merolae GN=t... 82 6e-16 sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinac... 82 8e-16 sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RM... 82 8e-16 sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Tritic... 82 1e-15 sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis G... 82 1e-15 sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis GN=trxA ... 82 1e-15
>sp|Q8LD49|TRXX_ARATH Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2 Length = 182
Score = 97.4 bits (241), Expect = 2e-20 Identities = 45/84 (53%), Positives = 59/84 (70%) Frame = -1
Query: 344 FPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEYD 165 F VL+S PVLV F A WCGPCKLI P ++++++++ L VKID +P L+ E+ Sbjct: 79 FSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFK 138
Query: 164 VYGLPTLIVFKDGKEVPNRRKEGA 93 VYGLP I+FKDGKEVP R+EGA Sbjct: 139 VYGLPHFILFKDGKEVPGSRREGA 162
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis GN=trxA PE=3 SV=2 Length = 105
Score = 89.4 bits (220), Expect = 5e-18 Identities = 34/76 (44%), Positives = 58/76 (76%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 SF EVL+S+ PVLV F A+WCGPCK++ P+ID ++K+ G +K +K+++ +PN+ EY Sbjct: 9 SFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNIPSEY 68
Query: 167 DVYGLPTLIVFKDGKE 120 + +PT+++FK+G++ Sbjct: 69 GIRSIPTIMLFKNGEQ 84
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3 Length = 140
Score = 88.6 bits (218), Expect = 9e-18 Identities = 37/77 (48%), Positives = 54/77 (70%) Frame = -1
Query: 350 DSFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKE 171 D+F + VL+S PVLV F A WCGPC++I PV+D +A ++ LK VK++ SPN+ E Sbjct: 42 DTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASE 101
Query: 170 YDVYGLPTLIVFKDGKE 120 Y + +PT++VFK GK+ Sbjct: 102 YGIRSIPTIMVFKGGKK 118
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii GN=trxA PE=3 SV=1 Length = 105
Score = 88.2 bits (217), Expect = 1e-17 Identities = 34/76 (44%), Positives = 57/76 (75%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 SF EVL+S+ PVLV F A+WCGPCK++ P+ID ++K+ G +K +K+++ +PN EY Sbjct: 9 SFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEY 68
Query: 167 DVYGLPTLIVFKDGKE 120 + +PT+++FK+G++ Sbjct: 69 GIRSIPTIMLFKNGEQ 84
>sp|Q9X2T1|THIO_PSEAE Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1 Length = 108
Score = 88.2 bits (217), Expect = 1e-17 Identities = 37/74 (50%), Positives = 55/74 (74%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 SF +VLK++ PVLV + A+WCGPCK+I PV+D VA+D+ G LK K+++ + + +Y Sbjct: 12 SFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKY 71
Query: 167 DVYGLPTLIVFKDG 126 V G+PTL++FKDG Sbjct: 72 GVRGIPTLMLFKDG 85
>sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1 Length = 107
Score = 88.2 bits (217), Expect = 1e-17 Identities = 34/77 (44%), Positives = 55/77 (71%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 SF EV+ ++ PVLV F A WCGPC+++ PV+D++A+++ S+K VKI+ +P + EY Sbjct: 10 SFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDNPTIAAEY 69
Query: 167 DVYGLPTLIVFKDGKEV 117 + +PTL++FK G+ V Sbjct: 70 GIRSIPTLMIFKSGERV 86
>sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PCC 6803) GN=trxA PE=1 SV=3 Length = 107
Score = 87.8 bits (216), Expect = 1e-17 Identities = 34/77 (44%), Positives = 54/77 (70%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 SF ++VL SE PVLV F A WCGPC+++ PV+D +++ + G +K VK++ +PN +Y Sbjct: 11 SFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNTASQY 70
Query: 167 DVYGLPTLIVFKDGKEV 117 + +PTL++FK G+ V Sbjct: 71 GIRSIPTLMIFKGGQRV 87
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA PE=3 SV=2 Length = 107
Score = 86.7 bits (213), Expect = 3e-17 Identities = 33/77 (42%), Positives = 55/77 (71%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 +F EVL+S PVLV F A WCGPC+++ PV+D +A+ ++ +K VK++ +P++ +Y Sbjct: 11 TFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQY 70
Query: 167 DVYGLPTLIVFKDGKEV 117 + +PTL++FKDG+ V Sbjct: 71 GIRSIPTLMIFKDGQRV 87
>sp|P0A4L1|THIO1_ANASP Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2 Length = 107
Score = 86.7 bits (213), Expect = 3e-17 Identities = 33/77 (42%), Positives = 54/77 (70%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 +F EVL S+ PVLV F A WCGPC+++ PV+D +A+ + G +K VK++ +P + +Y Sbjct: 11 TFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQY 70
Query: 167 DVYGLPTLIVFKDGKEV 117 + +PTL++FK G++V Sbjct: 71 GIRSIPTLMIFKGGQKV 87
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2 Length = 107
Score = 86.7 bits (213), Expect = 3e-17 Identities = 33/77 (42%), Positives = 54/77 (70%) Frame = -1
Query: 347 SFPDEVLKSECPVLVGFCADWCGPCKLIGPVIDSVAKDFNGSLKAVKIDVATSPNLVKEY 168 +F EVL S+ PVLV F A WCGPC+++ PV+D +A+ + G +K VK++ +P + +Y Sbjct: 11 TFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQY 70
Query: 167 DVYGLPTLIVFKDGKEV 117 + +PTL++FK G++V Sbjct: 71 GIRSIPTLMIFKGGQKV 87
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6T9S0 |
Definition |
tr|B6T9S0|B6T9S0_MAIZE Thioredoxin X OS=Zea mays |
Align length |
84 |
Score (bit) |
119.0 |
E-value |
1.0e-25 |
Report |
|