BP917852 |
Clone id |
YMU001_000106_D03 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_D03. |
Accession |
BP917852 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2418Contig1 |
Sequence |
GAATGATGATAGTGGTGATGAGGACATGAAGCGCTCTCGAATAGAATCGCAGGCCCCTGC AGGTAGGGGCCGGGGTCGCGGCCGTGGCAGAGGGAGGAAGAGCAATAGTGAAAGAGCGAA GATGGCAGAGGTGGACAAGCCTGATGACAATGAGGGGCCGTGCTCACCGCATCTGAGTGA GGACGGTGAGACTAGCTCAAAATCACCAGCAGATGAGGTGGAAGGTGAGCCTAGTGCAGG CGCTAAAGAACCTCTGCCAAGCTCAAGATGTCCAAAAGACTTCGATCTGAACATGGAATT GGATGAAAATGGTGAGGTGGCAGTTGGGAAGGAGGAAGATCATTCTCAATGGTTAGGGCC AGGATTACAAGGACTTAGTCCTGACACGGTTTCATTAAAAGTTCATCAGGATCAAAATGT ATTTCAGCCAGAAGAGGACTACGACTGTGAAGATGAGGAATGATTTGTCATCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q32MZ4 |
Definition |
sp|Q32MZ4|LRRF1_HUMAN Leucine-rich repeat flightless-interacting protein 1 OS=Homo sapiens |
Align length |
68 |
Score (bit) |
33.5 |
E-value |
0.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q17IV5 |
Definition |
tr|Q17IV5|Q17IV5_AEDAE Chromodomain helicase DNA binding protein (Fragment) OS=Aedes aegypti |
Align length |
115 |
Score (bit) |
40.4 |
E-value |
0.044 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917852|Adiantum capillus-veneris mRNA, clone: YMU001_000106_D03. (475 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q17IV5|Q17IV5_AEDAE Chromodomain helicase DNA binding protein... 40 0.044 tr|Q7T2W0|Q7T2W0_DANRE Putative uncharacterized protein YF-458 O... 37 0.38 tr|Q7RZB2|Q7RZB2_NEUCR Predicted protein (Related to Pol II tran... 37 0.38 tr|B4JYZ4|B4JYZ4_DROGR GH22387 OS=Drosophila grimshawi GN=GH2238... 37 0.64 tr|Q4RX08|Q4RX08_TETNG Chromosome 11 SCAF14979, whole genome sho... 36 1.1 tr|A5AHH6|A5AHH6_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|B8CE02|B8CE02_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.9 tr|B4QD05|B4QD05_DROSI GD25377 OS=Drosophila simulans GN=GD25377... 35 1.9 tr|B4HNZ2|B4HNZ2_DROSE GM19891 OS=Drosophila sechellia GN=GM1989... 35 1.9 tr|Q07XX7|Q07XX7_SHEFN Peptidase S9, prolyl oligopeptidase activ... 35 2.4 tr|B7S046|B7S046_9GAMM Twitching motility protein OS=marine gamm... 35 2.4 tr|Q4QCG9|Q4QCG9_LEIMA Putative uncharacterized protein OS=Leish... 35 2.4 tr|A4HYP1|A4HYP1_LEIIN Protein kinase, putative OS=Leishmania in... 35 2.4 tr|B0S6Q6|B0S6Q6_DANRE Novel protein OS=Danio rerio GN=DKEY-175C... 28 2.5 tr|B8LC85|B8LC85_THAPS Predicted protein OS=Thalassiosira pseudo... 34 3.2 tr|Q6C9P7|Q6C9P7_YARLI YALI0D09339p OS=Yarrowia lipolytica GN=YA... 34 3.2 tr|Q27043|Q27043_THEPA Polymorphic immunodominant molecule OS=Th... 34 4.2 tr|Q16ZD4|Q16ZD4_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.2 tr|B6KIZ0|B6KIZ0_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.2 tr|Q4SN10|Q4SN10_TETNG Chromosome 6 SCAF14544, whole genome shot... 34 4.2 tr|B7FEF5|B7FEF5_9ALPH Tegument protein OS=Equid herpesvirus 9 P... 33 5.4 tr|A6V2V9|A6V2V9_PSEA7 Putative uncharacterized protein OS=Pseud... 33 5.4 tr|B4IJV5|B4IJV5_DROSE GM21550 OS=Drosophila sechellia GN=GM2155... 33 5.4 tr|A0DRQ4|A0DRQ4_PARTE Chromosome undetermined scaffold_60, whol... 33 5.4 tr|Q05D04|Q05D04_HUMAN LRRFIP1 protein (Fragment) OS=Homo sapien... 33 5.4 tr|Q5KI16|Q5KI16_CRYNE Putative uncharacterized protein OS=Crypt... 33 5.4 tr|Q0UMN3|Q0UMN3_PHANO Putative uncharacterized protein OS=Phaeo... 33 5.4 tr|Q6NRX3|Q6NRX3_XENLA MGC81138 protein OS=Xenopus laevis GN=MGC... 33 7.1 tr|Q6JRV9|Q6JRV9_XENLA RTN4.2-A3 OS=Xenopus laevis GN=RTN4 PE=2 ... 33 7.1 tr|A3SIV3|A3SIV3_9RHOB TonB domain protein, putative OS=Roseovar... 33 7.1
>tr|Q17IV5|Q17IV5_AEDAE Chromodomain helicase DNA binding protein (Fragment) OS=Aedes aegypti GN=AAEL002230 PE=4 SV=1 Length = 4467
Score = 40.4 bits (93), Expect = 0.044 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = +2
Query: 14 GDEDMKRSRIESQAPAXXXXXXXXXXXXKSNSERAKMAEVDKPDDNEGPCSPHLSEDGET 193 G+E+ K+ ES + A SE +KM EVD+ DD +G ++ E Sbjct: 1633 GEEESKK---ESDSDAKAEDSKEGEEKDVKESEESKM-EVDEQDDKKGEIDKETEKEVEK 1688
Query: 194 SSKSPADEVE-GEPSAGAKEPLPSSRCPKDF---DLNMELDENG--EVAVGKEED 340 +S++ A+E+E EP KE S +D D D+ G E + GK+ED Sbjct: 1689 TSETKAEEMETEEPEESKKEKTEESVAEEDSAEDDKKASKDKEGAEEPSTGKKED 1743
>tr|Q7T2W0|Q7T2W0_DANRE Putative uncharacterized protein YF-458 OS=Danio rerio GN=znfl2a PE=2 SV=1 Length = 310
Score = 37.4 bits (85), Expect = 0.38 Identities = 27/137 (19%), Positives = 55/137 (40%) Frame = +2
Query: 17 DEDMKRSRIESQAPAXXXXXXXXXXXXKSNSERAKMAEVDKPDDNEGPCSPHLSEDGETS 196 DE S+ E++ P+ + +S+ AE+ + D E E +TS Sbjct: 21 DETKDLSKEENEEPSEEDSEESSEEDSEEDSDAVLSAELSEEDSEEDSDE----EQNQTS 76
Query: 197 SKSPADEVEGEPSAGAKEPLPSSRCPKDFDLNMELDENGEVAVGKEEDHSQWLGPGLQGL 376 ++ + AGA++ +C K + L ++ + G+ ++ G + Sbjct: 77 TRKXVLQKRAGARAGARKTWSCRQCGKSLTSSGSLRDHMRIHTGETPFSCRYCGKSFKTK 136
Query: 377 SPDTVSLKVHQDQNVFQ 427 +P T L++H + FQ Sbjct: 137 APLTEHLRIHTGEKPFQ 153
>tr|Q7RZB2|Q7RZB2_NEUCR Predicted protein (Related to Pol II transcription elongation factor) OS=Neurospora crassa GN=G17A4.140 PE=4 SV=1 Length = 601
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +2
Query: 2 NDDSGDEDMKRSRIESQAPAXXXXXXXXXXXXKS-NSERAKMAEVDKPDDNEGPCSPHLS 178 +DDSGDE M SR +S++P+ + S K A D ++EG SP S Sbjct: 17 SDDSGDEAMDMSRDDSRSPSPEPRKKDTSTRGTAKKSVGRKRARSDDESEDEGQASPPGS 76
Query: 179 EDGETSSKSPADEVEGEPSA 238 D + S +P DE + + A Sbjct: 77 PDSQAS--APMDESDSDSDA 94
>tr|B4JYZ4|B4JYZ4_DROGR GH22387 OS=Drosophila grimshawi GN=GH22387 PE=4 SV=1 Length = 235
Score = 36.6 bits (83), Expect = 0.64 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = -3
Query: 179 HSDAVSTAPHCHQACPPLPSSL-----FHYCSSSLCHGRDPGPYLQGPAILFESASCPHH 15 H A + AP A P P + FH +L H PY Q PA L SA+ PHH Sbjct: 175 HRTAPAPAPAPAPAPAPAPGPVVSTAHFHAAYPALAHS----PYAQYPAALPASAADPHH 230
Query: 14 HYHH 3 Y+H Sbjct: 231 AYYH 234
>tr|Q4RX08|Q4RX08_TETNG Chromosome 11 SCAF14979, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027615001 PE=3 SV=1 Length = 1284
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = +2
Query: 224 GEPSAGAKEPLPSSR---------CPKDFDLNMELDENGEVAVGKEEDHSQWLG 358 G P A + PL SR P+++D +D +GEV++ +E H+QWLG Sbjct: 4 GAPQAAGQGPLRGSRPGALFRCPITPEEYDCE-RVDIDGEVSLNRESKHNQWLG 56
>tr|A5AHH6|A5AHH6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014287 PE=4 SV=1 Length = 313
Score = 35.8 bits (81), Expect = 1.1 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Frame = +2
Query: 110 ERAKMAEVDKPDDNEG--PCSPHLSEDGET--------SSKSPADEVEGEPSAGAKEPLP 259 ER +AE +KP+D+ + + S++ ET SK V+ E Sbjct: 172 ERDTIAESEKPEDDTDMHTNNDNQSQNPETRDNGAEPEESKENISVVKNESKENISVGKN 231
Query: 260 SSRCPKDFDLNMELDENGE 316 + C ++FDLN++LDENG+ Sbjct: 232 ADSCVRNFDLNVDLDENGD 250
>tr|B8CE02|B8CE02_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_25233 PE=4 SV=1 Length = 623
Score = 35.0 bits (79), Expect = 1.9 Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Frame = +2
Query: 137 KPDDNEGPCSPHLSEDGETSSKSPADEVEGE---PSAGAKEPLPSSRCPKDFDLNMELDE 307 KPD NEG C+P L + S SP EVEG+ P A EP P + E Sbjct: 556 KPDSNEGGCTPVL----DPSPSSP--EVEGDSIPPDASVSEPAPLTE-----------SE 598
Query: 308 NGEVAVGKEEDHS 346 NG GKE HS Sbjct: 599 NG--PNGKETSHS 609
>tr|B4QD05|B4QD05_DROSI GD25377 OS=Drosophila simulans GN=GD25377 PE=4 SV=1 Length = 1267
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/115 (20%), Positives = 47/115 (40%) Frame = +2
Query: 2 NDDSGDEDMKRSRIESQAPAXXXXXXXXXXXXKSNSERAKMAEVDKPDDNEGPCSPHLSE 181 +DD D D ++ ++ +A A K++SE+ + D E +P + Sbjct: 504 DDDKDDNDGEKWKVLDEATADDDEVEKKDEDGKASSEKDEEEAEDPDKAKEDESAPKMET 563
Query: 182 DGETSSKSPADEVEGEPSAGAKEPLPSSRCPKDFDLNMELDENGEVAVGKEEDHS 346 + ET ++PA+ +P + A E ++ + NG+ A + D + Sbjct: 564 EAETKVEAPAE--AAKPESEASEASETAETSTEKSAETAAVSNGDAAAEQANDEN 616
>tr|B4HNZ2|B4HNZ2_DROSE GM19891 OS=Drosophila sechellia GN=GM19891 PE=4 SV=1 Length = 1269
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/115 (20%), Positives = 47/115 (40%) Frame = +2
Query: 2 NDDSGDEDMKRSRIESQAPAXXXXXXXXXXXXKSNSERAKMAEVDKPDDNEGPCSPHLSE 181 +DD D D ++ ++ +A A K++SE+ + D E +P + Sbjct: 504 DDDKDDNDGEKWKVLDEATADDDEVEKKDEDGKASSEKDEEEAEDPEKAKEDESAPKMET 563
Query: 182 DGETSSKSPADEVEGEPSAGAKEPLPSSRCPKDFDLNMELDENGEVAVGKEEDHS 346 + ET ++PA+ +P + A E ++ + NG+ A + D + Sbjct: 564 EAETKVEAPAE--AAKPESEASEASETAETSTEKSAETAAVSNGDAAAEQANDEN 616
>tr|Q07XX7|Q07XX7_SHEFN Peptidase S9, prolyl oligopeptidase active site domain protein OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_3301 PE=3 SV=1 Length = 829
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Frame = +2
Query: 314 EVAVGKEEDHSQWLGPGLQGLSPD------TVSLKVHQDQNVFQP 430 E+A GK E +QWLG LSPD T S VH D+ QP Sbjct: 503 EIATGKTEQLTQWLGTLDYNLSPDGQSLLLTASSAVHPDELYIQP 547
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