BP917858 [AcEST]

BP917858
Clone id	YMU001_000106_D12
Library	YMU01
Length	441
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000106_D12.
Accession	BP917858
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	ATAGAAGCATCCATTCAATAGTAGTGTTGAGCTTTACAATAGCCAGATACAAAATCCCAG CATATCTTGGCAAGCAGGAGACGGCGATACACAGACAGTAATAGGTGAGCCAATAATCAA GACTAGATGAAAACACAGGGGAAAGAGAGAGGGGAGGAAAGTAGGTAGTGGGCAACACAA CCAGACCTTATGCAGTCAAGAGCCACGGATGCCGAGGGTCGTAGCCTGAGGCCAACACAA GGAAAGGCGAGCTCATTGAAGAGGGGATGCAGTAATATGTACCCCATTTCTACAATAGGG TGGTTGGTGAGGGAGTTCCTACCATAAGAGGTGCCAACCAAAAAGTCCCCACAGCAAGTT GGTAAAAAACACTCACCAAGTAAGCAGACCCAACAGAGTCAGCGCGGGTGCCTGCAAGTA TCCCATCGATGAGCCATGTAC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q58666
Definition	sp\|Q58666\|LIVM_METJA Probable branched-chain amino acid transport permease protein livM OS=Methanocaldococcus jannaschii
Align length	57
Score (bit)	29.6
E-value	5.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917858\|Adiantum capillus-veneris mRNA, clone: YMU001_000106_D12. (441 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q58666\|LIVM_METJA Probable branched-chain amino acid transpor... 30 5.7 >sp\|Q58666\|LIVM_METJA Probable branched-chain amino acid transport permease protein livM OS=Methanocaldococcus jannaschii GN=livM PE=3 SV=1 Length = 345 Score = 29.6 bits (65), Expect = 5.7 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = -2 Query: 350 GDFLVGTSYGRNSLTN----HPIVEMGYILLH-PLFNELAFPCVGLRLRPSASVALD 195 GDF+ GT+Y +++ N +PIV +G ++L L + L F + + PSA + D Sbjct: 64 GDFITGTTYATSAINNLIASNPIVGIGILILAIILASILGFVVGAIFILPSAKLKED 120
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917858\|Adiantum capillus-veneris mRNA, clone: YMU001_000106_D12. (441 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****