BP917870 |
Clone id |
YMU001_000106_F02 |
Library |
YMU01 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_F02. |
Accession |
BP917870 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCCTCAGGCCAGGCCGAAGACCCTCCCCCCTCTAAAGAGAAAGCGTGACGACTACCATTT TGCTCATCATGTCCAGCCTTCGATAACGCTGAGCAGCAATTCTCTAGATAAGAATCAAGC ATCGGAGAAGCCACTATTTCTGAGCTTGTCTCCCTGCCACTTAGGCAACTACTCTTCTGT TCTGAAAGGTGTGACGAAGTCCTTGTTAATTCATCGCACTCGTGTTCTTTAATGTCGGCA GGCACTGATTCCCCATTTCTTGCGGCGTCGGGAGAGCTTCTGCACGTCCTCTCAAGCTCA CACTTATCCTGTGAAATGCTGATAGGACTAGTGTCAATGGTCCTTTCCAATGTCACCATC TTTAATTTCTCTGGAGCTAATTTTAAGCCTGACCCAGGCCAAGGTATAGCAATAGAAACA TGTTGAGCAGAGAAGTCTTCATAGGACCTTGAAAGAGATTTCTGTTTTTGGGCGGAGTGC AGGCTTGCATCATAATATTTCCATATGCAAACACGTGAATCTTCGCTTGCACAAATTACG TACATCCCATTGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6LA54 |
Definition |
sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c OS=Schizosaccharomyces pombe |
Align length |
31 |
Score (bit) |
33.5 |
E-value |
0.71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P1I9 |
Definition |
tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
55 |
Score (bit) |
61.2 |
E-value |
3.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917870|Adiantum capillus-veneris mRNA, clone: YMU001_000106_F02. (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome... 61 3e-08 tr|A7PNL8|A7PNL8_VITVI Chromosome chr8 scaffold_23, whole genome... 58 3e-07 tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein OS=Ar... 56 1e-06 tr|Q7FAN9|Q7FAN9_ORYSJ Os04g0678300 protein OS=Oryza sativa subs... 54 7e-06 tr|Q259C8|Q259C8_ORYSA H0801D08.5 protein (H0402C08.15 protein) ... 54 7e-06 tr|B8ARG9|B8ARG9_ORYSI Putative uncharacterized protein OS=Oryza... 54 7e-06 tr|A3AYN3|A3AYN3_ORYSJ Putative uncharacterized protein OS=Oryza... 54 7e-06 tr|B4FFW3|B4FFW3_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 2e-05 tr|Q9LDG7|Q9LDG7_ARATH WD-40 repeat protein-like (AT3g15470/MJK1... 52 2e-05 tr|A9TT82|A9TT82_PHYPA Predicted protein OS=Physcomitrella paten... 52 3e-05 tr|Q9LZ59|Q9LZ59_ARATH Putative uncharacterized protein T22P11_2... 50 1e-04 tr|A9T0D4|A9T0D4_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 1e-04 tr|Q7XS41|Q7XS41_ORYSJ OSJNBa0074L08.11 protein OS=Oryza sativa ... 49 2e-04 tr|B8ASC7|B8ASC7_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella paten... 48 3e-04 tr|B6U7W0|B6U7W0_MAIZE Signal transducer OS=Zea mays PE=2 SV=1 47 9e-04 tr|B4FG57|B4FG57_MAIZE Putative uncharacterized protein OS=Zea m... 47 9e-04 tr|Q9FHY2|Q9FHY2_ARATH Similarity to unknown protein OS=Arabidop... 46 0.001 tr|B8BJI7|B8BJI7_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A7QB92|A7QB92_VITVI Chromosome chr4 scaffold_73, whole genome... 45 0.002 tr|O80935|O80935_ARATH Putative WD-40 repeat protein OS=Arabidop... 45 0.003 tr|Q53P51|Q53P51_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 44 0.004 tr|Q7XQE7|Q7XQE7_ORYSJ OSJNBa0033G16.13 protein OS=Oryza sativa ... 43 0.010 tr|Q0JDA3|Q0JDA3_ORYSJ Os04g0417800 protein OS=Oryza sativa subs... 43 0.010 tr|Q01I39|Q01I39_ORYSA OSIGBa0092M08.13 protein OS=Oryza sativa ... 43 0.010 tr|B8BNG0|B8BNG0_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010 tr|B8ATP7|B8ATP7_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010 tr|A3CFH2|A3CFH2_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.010
>tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027633001 PE=4 SV=1 Length = 769
Score = 61.2 bits (147), Expect = 3e-08 Identities = 30/55 (54%), Positives = 38/55 (69%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQKSLSRSYEDFSAQHVSIAIPWPGSG 387 NG YV+CASEDS V +WK+ S K +++RSYE F +Q VS+AIPWPG G Sbjct: 593 NGKYVVCASEDSYVYVWKHDTRPGRS--KGIAVTRSYEHFHSQDVSVAIPWPGMG 645
>tr|A7PNL8|A7PNL8_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021311001 PE=4 SV=1 Length = 817
Score = 58.2 bits (139), Expect = 3e-07 Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQKSL--SRSYEDFSAQHVSIAIPWPGSGLKL 378 +G YVI ASEDS+V +W+ + A K KSL +RS+E F ++ VS+AIPWPGS +K Sbjct: 607 DGKYVISASEDSQVYVWRRDEVRHIGAGKGKSLVTTRSHEHFQSRDVSVAIPWPGS-VKG 665
Query: 377 APEKLKMVTLERTIDTSPISISQDKCELERTCRSSPDAARNGESVPADIKEHECDELTRT 198 P + V +R S + +D SS D + + P K D R Sbjct: 666 EPPVVP-VHSKRHSKRSGSTSQED---------SSTDGSNKAQLPPLPKKNSSLD---RM 712
Query: 197 SSHLSEQKSSCLSGRETSSEIVAS 126 + E+ +SCL SSE +S Sbjct: 713 PTCPEEEMTSCLDPGIGSSESFSS 736
>tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein OS=Arabidopsis thaliana GN=At5g54200 PE=4 SV=1 Length = 825
Score = 56.2 bits (134), Expect = 1e-06 Identities = 24/54 (44%), Positives = 35/54 (64%) Frame = -2
Query: 554 SNGMYVICASEDSRVCIWKYYDASLHSAQKQKSLSRSYEDFSAQHVSIAIPWPG 393 SNG +++ ASEDS V +W Y S K+ +++ SYE+F + VS+A PWPG Sbjct: 654 SNGKFLVSASEDSNVYVWNYDSDSRAGRSKRVTVTNSYENFYCRDVSVAAPWPG 707
>tr|Q7FAN9|Q7FAN9_ORYSJ Os04g0678300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0064G10.23 PE=4 SV=1 Length = 819
Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQK-SLSRSYEDFSAQHVSIAIPWPGS 390 NG YV+CASEDS V +W++ + S S + ++ SYE F V++AI WPG+ Sbjct: 641 NGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGA 695
>tr|Q259C8|Q259C8_ORYSA H0801D08.5 protein (H0402C08.15 protein) OS=Oryza sativa GN=H0801D08.5 PE=4 SV=1 Length = 785
Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQK-SLSRSYEDFSAQHVSIAIPWPGS 390 NG YV+CASEDS V +W++ + S S + ++ SYE F V++AI WPG+ Sbjct: 607 NGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGA 661
>tr|B8ARG9|B8ARG9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17932 PE=4 SV=1 Length = 816
Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQK-SLSRSYEDFSAQHVSIAIPWPGS 390 NG YV+CASEDS V +W++ + S S + ++ SYE F V++AI WPG+ Sbjct: 638 NGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGA 692
>tr|A3AYN3|A3AYN3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015905 PE=4 SV=1 Length = 788
Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQK-SLSRSYEDFSAQHVSIAIPWPGS 390 NG YV+CASEDS V +W++ + S S + ++ SYE F V++AI WPG+ Sbjct: 610 NGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGA 664
>tr|B4FFW3|B4FFW3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 391
Score = 53.1 bits (126), Expect = 1e-05 Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 2/169 (1%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYYDASLHSAQKQ--KSLSRSYEDFSAQHVSIAIPWPGSGLKL 378 NG Y+ICASEDS V +W+ +D S H ++ + ++ SYE F V++A+ WPG+ Sbjct: 229 NGKYIICASEDSHVYVWR-HDNSSHPSRNRITVDVTNSYEHFHCHGVTVAVTWPGAE--- 284
Query: 377 APEKLKMVTLERTIDTSPISISQDKCELERTCRSSPDAARNGESVPADIKEHECDELTRT 198 R S S D S A +G +PA+ +H D T Sbjct: 285 ----------ARGSFGSRSSRHSD----------SDGAVNSGRDIPAENSQHNSD--AGT 322
Query: 197 SSHLSEQKSSCLSGRETSSEIVASPMLDSYLENCCSALSKAGHDEQNGS 51 S H ++ S TS P S +C S L D Q S Sbjct: 323 SRHPGDRAS-------TSWPDEKLPSAKSSPSHCSSDLCIGAMDVQRRS 364
>tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74281 PE=4 SV=1 Length = 328
Score = 53.1 bits (126), Expect = 1e-05 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYY--DASLHSAQKQKSLSRSYEDFSAQHVSIAIPWPGSGLKL 378 +G +++ ASEDSRV +W + D S ++ ++ S E+F+A+HVS+AI WP S + Sbjct: 169 SGDFIVSASEDSRVLVWSSFNKDTSNKTSLYRRDKQLSCEEFTARHVSVAITWPDSSARS 228
Query: 377 APEKL 363 A E L Sbjct: 229 ASEPL 233
>tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144791 PE=4 SV=1 Length = 666
Score = 52.4 bits (124), Expect = 2e-05 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Frame = -2
Query: 551 NGMYVICASEDSRVCIWKYY--DASLHSAQKQKSLSRSYEDFSAQHVSIAIPWPGSGLKL 378 NG ++I ASEDSRV +W D S S+ +K S E+F+++HVS+AI WP S ++ Sbjct: 467 NGDFIISASEDSRVLVWSSANRDISNKSSLYRKDKQLSCEEFTSRHVSVAIAWPDSSVRS 526
Query: 377 A 375 A Sbjct: 527 A 527
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