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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917871
Clone id YMU001_000106_F03
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAACAAATACATAATGCTGATATTTTGATTTCAAAATGGGAAGATGTCAAAATACAAAAC
TACAAAGCTGCCTCATGGATAGTCTCGTATACATATGTTGTAAGTATATGGATCTACAAG
TTTCCATGATAGAAAGACAAAAGTTTAGATCCGTCATCGTACAAAAAGAAACTTCTCCTT
CTAAGCTTGTGAACTAGATGTTGTCCTCATGTGTGCTGGTCTTCTATCTTTCATTTGCCT
CCAAGCTTCGAAGCACTCGTCCCATGACACCCCTTCCAGCTGCCTAAGCTTTGGCGTATT
TAGTCCAACAAACATGACAAGTCCTAACATGTCCAATGACAATCTGTTCCTAAACTTGTC
TTTGATCTTATTCATTTTGGAAAACCCGCTTTCACATGCTACTGACGAAAGAGGTAACAC
AAGCAAGATCCGTCAAAGAACCATTGTGGAAGGAAATGATTGCTCCCACTCCATATGATT
GCAGCACTCCTGCCATGCTGAGTGCATGTTCCG
■■Homology search results ■■ -
sp_hit_id O60290
Definition sp|O60290|ZN862_HUMAN Zinc finger protein 862 OS=Homo sapiens
Align length 63
Score (bit) 43.1
E-value 0.0008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917871|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_F03.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O60290|ZN862_HUMAN Zinc finger protein 862 OS=Homo sapiens GN...    43   8e-04
sp|Q8TCP9|CG038_HUMAN Uncharacterized protein C7orf38 OS=Homo sa...    36   0.12 
sp|Q4R6P1|CG038_MACFA Uncharacterized protein C7orf38 homolog OS...    33   0.60 
sp|Q6R2W3|SCND3_HUMAN SCAN domain-containing protein 3 OS=Homo s...    32   1.8  

>sp|O60290|ZN862_HUMAN Zinc finger protein 862 OS=Homo sapiens
            GN=ZNF862 PE=2 SV=2
          Length = 1169

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 20/63 (31%), Positives = 35/63 (55%)
 Frame = -1

Query: 486  CCNHMEWEQSFPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFV 307
            C N +     FP    L  +++ +P+S+  CE GF  MN+I+   R +LS ++L ++M  
Sbjct: 1009 CKNALAQHCRFPLLSKLMAVVVCVPISTSCCERGFKAMNRIRTDERTKLSNEVLNMLMMT 1068

Query: 306  GLN 298
             +N
Sbjct: 1069 AVN 1071


>sp|Q8TCP9|CG038_HUMAN Uncharacterized protein C7orf38 OS=Homo
           sapiens GN=C7orf38 PE=2 SV=1
          Length = 573

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -1

Query: 429 ILLVLPLSSV-ACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQLEGVSWDEC 253
           ILL+LP ++   CE GFS + ++K K RNRL+            + P +R    V+   C
Sbjct: 514 ILLLLPFTTTYLCELGFSILTRLKTKKRNRLN------------SAPDMR----VALSSC 557

Query: 252 FEAWRQMKDRR--PAH 211
              W+++ +R+  P+H
Sbjct: 558 VPDWKELMNRQAHPSH 573


>sp|Q4R6P1|CG038_MACFA Uncharacterized protein C7orf38 homolog
           OS=Macaca fascicularis GN=QtsA-17507 PE=2 SV=1
          Length = 573

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = -1

Query: 429 ILLVLPLSSV-ACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQLEGVSWDEC 253
           I L+LP ++   CE GFS + ++K K RNRL+            + P +R    V+   C
Sbjct: 514 ISLLLPFTTTYLCELGFSILTRLKTKKRNRLN------------SAPDMR----VALSSC 557

Query: 252 FEAWRQMKDRR--PAH 211
              W+++ +R+  P+H
Sbjct: 558 VPDWKELMNRQAHPSH 573


>sp|Q6R2W3|SCND3_HUMAN SCAN domain-containing protein 3 OS=Homo
            sapiens GN=SCAND3 PE=2 SV=1
          Length = 1325

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = -1

Query: 432  RILLVLPLSSVACESGFSKMNKIKDKFRNRLSL 334
            ++LL+ P S+  CE+GFS ++ IK K RN L++
Sbjct: 1266 KLLLLFP-STYLCETGFSTLSVIKTKHRNSLNI 1297
tr_hit_id Q4RZJ3
Definition tr|Q4RZJ3|Q4RZJ3_TETNG Chromosome undetermined SCAF14814, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 63
Score (bit) 47.4
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917871|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_F03.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4RZJ3|Q4RZJ3_TETNG Chromosome undetermined SCAF14814, whole ...    47   4e-04
tr|B6MWB7|B6MWB7_BRAFL Putative uncharacterized protein OS=Branc...    47   4e-04
tr|B6NY79|B6NY79_BRAFL Putative uncharacterized protein OS=Branc...    44   0.005
tr|A7SV10|A7SV10_NEMVE Predicted protein OS=Nematostella vectens...    43   0.008
tr|B7P3C8|B7P3C8_IXOSC Putative uncharacterized protein OS=Ixode...    42   0.014
tr|B6P522|B6P522_BRAFL Putative uncharacterized protein OS=Branc...    42   0.014
tr|B3G4H2|B3G4H2_9BILA MYM domain containing 1-like protein OS=A...    41   0.040
tr|Q9ZWT4|Q9ZWT4_IPOPU Transposase OS=Ipomoea purpurea PE=4 SV=1       40   0.089
tr|Q5UDR1|Q5UDR1_MAIZE Transposase OS=Zea mays PE=4 SV=1               40   0.089
tr|A2Q6E7|A2Q6E7_MEDTR HAT dimerisation (Fragment) OS=Medicago t...    40   0.089
tr|Q9SN25|Q9SN25_ARATH Putative uncharacterized protein F28M11.1...    39   0.12 
tr|Q2R1H1|Q2R1H1_ORYSJ HAT family dimerisation domain containing...    39   0.20 
tr|B6U8U9|B6U8U9_MAIZE Transposon protein Ac/Ds sub-class OS=Zea...    38   0.26 
tr|Q9SKI5|Q9SKI5_ARATH Ac-like transposase OS=Arabidopsis thalia...    37   0.58 
tr|Q9LZN8|Q9LZN8_ARATH Putative uncharacterized protein T12C14_2...    37   0.75 
tr|Q0J7Q0|Q0J7Q0_ORYSJ Os08g0172300 protein (Fragment) OS=Oryza ...    37   0.75 
tr|B7F3J8|B7F3J8_ORYSJ cDNA clone:002-180-G06, full insert seque...    37   0.75 
tr|A3BQ39|A3BQ39_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.75 
tr|B5GCD8|B5GCD8_9ACTO Predicted protein OS=Streptomyces sp. SPB...    36   0.96 
tr|Q0DY61|Q0DY61_ORYSJ Os02g0713600 protein OS=Oryza sativa subs...    36   0.98 
tr|O82185|O82185_ARATH Ac-like transposase OS=Arabidopsis thalia...    36   0.98 
tr|Q9FWT7|Q9FWT7_ORYSJ Putative Tam3-transposase OS=Oryza sativa...    36   1.3  
tr|Q8LNK9|Q8LNK9_ORYSJ Putative transposable element (HAT family...    36   1.3  
tr|Q7XD60|Q7XD60_ORYSJ HAT family dimerisation domain containing...    36   1.3  
tr|A2X9N5|A2X9N5_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.3  
tr|A2X9N4|A2X9N4_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.3  
tr|A7S6J7|A7S6J7_NEMVE Predicted protein OS=Nematostella vectens...    36   1.3  
tr|B2RD92|B2RD92_HUMAN cDNA, FLJ96510 OS=Homo sapiens PE=2 SV=1        36   1.3  
tr|A8K3V9|A8K3V9_HUMAN cDNA FLJ77794 OS=Homo sapiens PE=2 SV=1         36   1.3  
tr|A4D293|A4D293_HUMAN Putative uncharacterized protein DKFZp727...    36   1.3  

>tr|Q4RZJ3|Q4RZJ3_TETNG Chromosome undetermined SCAF14814, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00026455001 PE=4 SV=1
          Length = 305

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = -1

Query: 408 SSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQLEGVSWDECFEAWRQMK 229
           SS  CE GFS MN+IK   RN L +D L  +M +     KL+  E +  D  +  WR+ K
Sbjct: 244 SSADCERGFSLMNQIKTASRNCLEVDHLDQLMRI---KSKLQADEAIDLDNVYNHWRREK 300

Query: 228 DRR 220
           DRR
Sbjct: 301 DRR 303


>tr|B6MWB7|B6MWB7_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_124931 PE=4 SV=1
          Length = 1766

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 23/68 (33%), Positives = 39/68 (57%)
 Frame = -1

Query: 495 WQECCNHMEWEQSFPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLV 316
           W+E    +   + FP+ + L  +  +LP+ +  CE GFS  N+IK + RN LS+  L ++
Sbjct: 302 WKEL-ERVHGSELFPNLLKLATVGRLLPMHTADCERGFSTQNRIKTRLRNALSVKRLDIL 360

Query: 315 MFVGLNTP 292
           M + +N P
Sbjct: 361 MRIAINGP 368


>tr|B6NY79|B6NY79_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_100537 PE=4 SV=1
          Length = 376

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 27/82 (32%), Positives = 42/82 (51%)
 Frame = -1

Query: 453 PSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQLE 274
           P T  L  I+ V+P+S+V  E GFS  N+I    R RL  + L ++M +G++ P++ Q E
Sbjct: 284 PETTKLLDIVSVIPMSTVPYERGFSVENRIITNGRARLRGENLNMLMRIGIDVPEIGQFE 343

Query: 273 GVSWDECFEAWRQMKDRRPAHM 208
                E F A   +  +    M
Sbjct: 344 FYRTLEMFRAMSHIPRKMSGRM 365


>tr|A7SV10|A7SV10_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g217896 PE=4 SV=1
          Length = 754

 Score = 43.1 bits (100), Expect = 0.008
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -1

Query: 456 FPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQL 277
           +P  + + ++ LVLPLS+   E G SK+  IK++ R RL  +ML  ++ + +N P +   
Sbjct: 574 YPLLVHIAKVALVLPLSNAWPERGASKVKLIKNRLRTRLGGEMLNALLCMSINGPPVNSP 633

Query: 276 EGVSW-DECFEAWRQMKDR 223
           E  S      E W   K R
Sbjct: 634 ESHSMLTSAVETWFLQKKR 652


>tr|B7P3C8|B7P3C8_IXOSC Putative uncharacterized protein OS=Ixodes
           scapularis GN=IscW_ISCW001050 PE=4 SV=1
          Length = 352

 Score = 42.4 bits (98), Expect = 0.014
 Identities = 21/48 (43%), Positives = 26/48 (54%)
 Frame = -1

Query: 468 WEQSFPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDML 325
           WE  FP    L   +L LP S+ + E  FS MN +K + RNRL  D L
Sbjct: 248 WENPFPELSSLAMTVLSLPFSNASTEKCFSDMNIVKSELRNRLDFDTL 295


>tr|B6P522|B6P522_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_102822 PE=4 SV=1
          Length = 276

 Score = 42.4 bits (98), Expect = 0.014
 Identities = 21/79 (26%), Positives = 44/79 (55%)
 Frame = -1

Query: 456 FPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQL 277
           +P+  +L  +L+V+P+S+   E  FS + +IK + R+RLS  +L  ++ + ++ P +   
Sbjct: 198 YPNMRLLASVLMVIPVSTADSERSFSTLKRIKTRLRSRLSNAVLNDLLTISIDGPHVNDF 257

Query: 276 EGVSWDECFEAWRQMKDRR 220
           +   +      W  +K+RR
Sbjct: 258 D---FARAVTKWAGLKNRR 273


>tr|B3G4H2|B3G4H2_9BILA MYM domain containing 1-like protein
           OS=Adineta vaga PE=4 SV=1
          Length = 919

 Score = 40.8 bits (94), Expect = 0.040
 Identities = 23/68 (33%), Positives = 40/68 (58%)
 Frame = -1

Query: 495 WQECCNHMEWEQSFPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLV 316
           W+E  ++   EQ + + ++L  I L+  LSS  CE G+S  N+I+   R+R+ ++ L ++
Sbjct: 736 WKEPLDNCFHEQ-YKNILILLSIYLISSLSSTECERGYSVANRIQTNGRSRIMIETLDVL 794

Query: 315 MFVGLNTP 292
           M V L  P
Sbjct: 795 MNVRLLLP 802


>tr|Q9ZWT4|Q9ZWT4_IPOPU Transposase OS=Ipomoea purpurea PE=4 SV=1
          Length = 808

 Score = 39.7 bits (91), Expect = 0.089
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = -1

Query: 456 FPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQL 277
           +P    +  ++L LP+S+   E  FS MN +K   RN++  + L   + V +     +Q 
Sbjct: 730 YPLVFRVVTLVLTLPVSTATTERSFSAMNIVKTTLRNKMEDEFLSDCLLVYIEKQIAKQF 789

Query: 276 EGVSWDECFEAWRQMKDRR 220
              S D   +A+R M++RR
Sbjct: 790 ---SIDSIIDAFRDMQERR 805


>tr|Q5UDR1|Q5UDR1_MAIZE Transposase OS=Zea mays PE=4 SV=1
          Length = 674

 Score = 39.7 bits (91), Expect = 0.089
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = -1

Query: 465 EQSFPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDML 325
           EQ FP    L R +L +P+SSVA ES FS   +I D FR+ L+  ML
Sbjct: 563 EQRFPILSRLARDVLAIPISSVASESAFSTGGRILDDFRSSLTPFML 609


>tr|A2Q6E7|A2Q6E7_MEDTR HAT dimerisation (Fragment) OS=Medicago
           truncatula GN=MtrDRAFT_AC174468g12v1 PE=4 SV=1
          Length = 143

 Score = 39.7 bits (91), Expect = 0.089
 Identities = 23/80 (28%), Positives = 37/80 (46%)
 Frame = -1

Query: 456 FPSTMVL*RILLVLPLSSVACESGFSKMNKIKDKFRNRLSLDMLGLVMFVGLNTPKLRQL 277
           FP    L  + L+LP+S+ + E  FS M  IK K RN+++ + L  +M         + L
Sbjct: 60  FPLVYKLIELALILPVSTASVERAFSAMKIIKTKLRNKINNEWLNDLMICYTEREIFKSL 119

Query: 276 EGVSWDECFEAWRQMKDRRP 217
           + +     F A +  K   P
Sbjct: 120 DDIDIIRTFTAKKSQKGHLP 139