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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917873
Clone id YMU001_000106_F05
Library
Length 462
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTAATCAGAAAAGCTGGTGCCTGCATTGCAAACCTTAGCACAAGTTTTGACAATCTTA
TTCTCTTGCAAGAGAGCTCAAAAGTTGAATACTCCAAAACACAATGATATGTCATGTTGG
TCGTCGCTAAGCTTGAACAGACAGCCTTACTAGTAGTAATACAGATAAGAAGCTTTCATT
AGATACAACTAAACAGGACTGTACAGCAATCCCATATGTTACAAGGTTGCGACCGAGGAA
GTAACCTGCCGCTCCAGCATACTATTGCCCTCCATTGACCACAAGCTTTACTTCATACAA
GTTCTCGCCTCCCGCAGCTATATCTGCCGTTATCCCGGGTCCAAAAAAGGATGCAAACTT
GGCCTGCCGTTCCGTGAAGTCTTTTAGTTCCAGTGCCTTGGCTTCGAATACTAGCACGAG
CGAATACTTTCCTTCAGTGGTAACCTCTTCGCGAATAGCCTG
■■Homology search results ■■ -
sp_hit_id Q55403
Definition sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803)
Align length 52
Score (bit) 42.7
E-value 0.0008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917873|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_F05.
         (462 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synec...    43   8e-04
sp|Q9AVB0|LECB_PHYAM Lectin-B OS=Phytolacca americana PE=1 SV=1        31   2.9  
sp|Q7MAP8|PDXJ_WOLSU Pyridoxine 5'-phosphate synthase OS=Wolinel...    30   3.9  
sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=M...    30   3.9  
sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Hom...    29   8.7  

>sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575
           OS=Synechocystis sp. (strain PCC 6803) GN=slr0575 PE=4
           SV=1
          Length = 184

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = -1

Query: 435 EGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 280
           EGKY L L F +  + L+ + E+Q K A FFGP +   +A   E +  V L+
Sbjct: 127 EGKYVLTLTFTSPFISLETWQEKQEKIAKFFGPDLEVTVAEPEEKVVTVNLI 178


>sp|Q9AVB0|LECB_PHYAM Lectin-B OS=Phytolacca americana PE=1 SV=1
          Length = 361

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 283 CGQWRAIVCWSGRLLPRSQPCNIWDCC 203
           C  WR  V +SGR+ P+ + C+ W  C
Sbjct: 292 CDYWRCGVDFSGRVCPQGRCCSAWGWC 318


>sp|Q7MAP8|PDXJ_WOLSU Pyridoxine 5'-phosphate synthase OS=Wolinella
           succinogenes GN=pdxJ PE=3 SV=1
          Length = 262

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 453 REEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITA 325
           REEVTTEG   L+  FE     +  F E     + F  P IT+
Sbjct: 95  REEVTTEGGLDLLGRFEILKSRIAQFRENDIAVSLFVDPDITS 137


>sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=Mus
           musculus GN=Cntnap5a PE=2 SV=1
          Length = 1304

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 55  ILFSCKRAQKLNTPKHNDMSCWSSLSLNRQPY 150
           +++ C+R++ LNTP     + W   S  R PY
Sbjct: 678 VIYHCRRSRLLNTPDGAPFTWWIGRSTERHPY 709


>sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Homo
           sapiens GN=CNTNAP5 PE=2 SV=1
          Length = 1306

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 55  ILFSCKRAQKLNTPKHNDMSCWSSLSLNRQPY 150
           + + C+R++ LNTP     + W   S  R PY
Sbjct: 678 VAYHCRRSRLLNTPDGTPFTWWIGRSNERHPY 709
tr_hit_id A9NSY7
Definition tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 59
Score (bit) 97.8
E-value 2.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917873|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_F05.
         (462 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea...    98   2e-19
tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome...    95   1e-18
tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subs...    94   3e-18
tr|A9NQG3|A9NQG3_PICSI Putative uncharacterized protein OS=Picea...    91   2e-17
tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea m...    90   5e-17
tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1                      89   1e-16
tr|A9PH66|A9PH66_POPTR Putative uncharacterized protein OS=Popul...    88   2e-16
tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g3866...    86   7e-16
tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein At5g3866...    86   7e-16
tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1     86   7e-16
tr|B8BA11|B8BA11_ORYSI Putative uncharacterized protein OS=Oryza...    86   9e-16
tr|A3BSD0|A3BSD0_ORYSJ Putative uncharacterized protein OS=Oryza...    86   9e-16
tr|Q9FFV6|Q9FFV6_ARATH Genomic DNA, chromosome 5, P1 clone:MBB18...    77   3e-13
tr|A7QLX1|A7QLX1_VITVI Chromosome chr18 scaffold_122, whole geno...    70   4e-11
tr|A9TNK0|A9TNK0_PHYPA Predicted protein (Fragment) OS=Physcomit...    70   5e-11
tr|B1X1Q3|B1X1Q3_CYAA5 Putative uncharacterized protein OS=Cyano...    49   1e-04
tr|B0CDF7|B0CDF7_ACAM1 Putative uncharacterized protein OS=Acary...    49   2e-04
tr|B1XK23|B1XK23_SYNP2 Putative uncharacterized protein OS=Synec...    48   2e-04
tr|A3IVT2|A3IVT2_9CHRO Putative uncharacterized protein OS=Cyano...    48   3e-04
tr|B7JZE9|B7JZE9_SYNP8 Putative uncharacterized protein OS=Synec...    47   6e-04
tr|B4C670|B4C670_9CHRO Putative uncharacterized protein OS=Cyano...    47   6e-04
tr|B4AWW2|B4AWW2_9CHRO Putative uncharacterized protein OS=Cyano...    47   6e-04
tr|Q3M8B0|Q3M8B0_ANAVT Putative uncharacterized protein OS=Anaba...    46   8e-04
tr|Q5MZ47|Q5MZ47_SYNP6 Putative uncharacterized protein OS=Synec...    45   0.001
tr|Q31N42|Q31N42_SYNE7 Putative uncharacterized protein OS=Synec...    45   0.001
tr|B4WIU5|B4WIU5_9SYNE Putative uncharacterized protein OS=Synec...    45   0.002
tr|B2J943|B2J943_NOSP7 Putative uncharacterized protein OS=Nosto...    44   0.005
tr|Q8YR54|Q8YR54_ANASP Alr3596 protein OS=Anabaena sp. (strain P...    43   0.007
tr|Q8DKR5|Q8DKR5_THEEB Tll0792 protein OS=Thermosynechococcus el...    43   0.009
tr|A0ZFV4|A0ZFV4_NODSP Putative uncharacterized protein OS=Nodul...    43   0.009

>tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 275

 Score = 97.8 bits (242), Expect = 2e-19
 Identities = 45/59 (76%), Positives = 54/59 (91%)
 Frame = -1

Query: 456 IREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 280
           IREEVT EGKYSLVLVFEAKAL+L DF +R+AKFASFFGPG+TA++  GG+NLYEV+L+
Sbjct: 208 IREEVTAEGKYSLVLVFEAKALQLTDFEQRRAKFASFFGPGVTAEVVKGGDNLYEVRLI 266


>tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038180001
           PE=4 SV=1
          Length = 279

 Score = 95.1 bits (235), Expect = 1e-18
 Identities = 46/63 (73%), Positives = 54/63 (85%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKL 283
           Q IREEVT +GKY LVLVFEAKAL+L DF +RQAKFASFFGPGITA++A G  +LYEV+L
Sbjct: 214 QMIREEVTEDGKYCLVLVFEAKALQLSDFEKRQAKFASFFGPGITAEVAKGENDLYEVRL 273

Query: 282 VVN 274
           + N
Sbjct: 274 ISN 276


>tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subsp.
           japonica GN=P0488B06.35 PE=2 SV=1
          Length = 271

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKL 283
           Q IREEVT +GKYSLVLVFEAKALE+ DF +RQAKF SFFGPGI A+I  GG++LYEV+L
Sbjct: 207 QNIREEVTDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRL 266

Query: 282 V 280
           +
Sbjct: 267 I 267


>tr|A9NQG3|A9NQG3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 137

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -1

Query: 447 EVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 280
           +VT EGKYSLVLVFEAKAL+L DF +R+AKFASFFGPG+TA++  GG+NLYEV+L+
Sbjct: 73  QVTAEGKYSLVLVFEAKALQLTDFEQRRAKFASFFGPGVTAEVVKGGDNLYEVRLI 128


>tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 261

 Score = 90.1 bits (222), Expect = 5e-17
 Identities = 47/63 (74%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAA--GGENLYEV 289
           Q IREEVT +GKYSLVLVFEAKALEL DF +RQAKF SFFGPGI A+I A  GG +LYEV
Sbjct: 195 QKIREEVTDDGKYSLVLVFEAKALELSDFEKRQAKFTSFFGPGIKAEIDAGKGGGDLYEV 254

Query: 288 KLV 280
           +L+
Sbjct: 255 RLI 257


>tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1
          Length = 261

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAA--GGENLYEV 289
           Q IREEVT +GKYSLVLVF+AKALEL DF +RQAKF SFFGPGI A+I A  GG +LYEV
Sbjct: 195 QKIREEVTDDGKYSLVLVFQAKALELSDFEKRQAKFTSFFGPGIKAEIDAGKGGGDLYEV 254

Query: 288 KLV 280
           +L+
Sbjct: 255 RLI 257


>tr|A9PH66|A9PH66_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 70

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 43/61 (70%), Positives = 49/61 (80%)
 Frame = -1

Query: 456 IREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLVV 277
           IREEVT +GKY LVLVFE+KAL+L DF +RQ KF SFFGP ITA+I  G  NLYEV+LV 
Sbjct: 2   IREEVTEDGKYCLVLVFESKALQLSDFEKRQGKFTSFFGPDITAEIGKGENNLYEVRLVS 61

Query: 276 N 274
           N
Sbjct: 62  N 62


>tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g38660
           OS=Arabidopsis thaliana GN=At5g38660 PE=2 SV=1
          Length = 286

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVK 286
           Q IREEV T+G+Y +VLVFEAKAL L DF +RQAKF SFFGP ITA++  G  ENLYEV+
Sbjct: 213 QLIREEVLTDGRYCVVLVFEAKALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVR 272

Query: 285 LVVN 274
           L+ N
Sbjct: 273 LISN 276


>tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein
           At5g38660/MBB18_21 OS=Arabidopsis thaliana
           GN=At5g38660/MBB18_21 PE=2 SV=1
          Length = 286

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVK 286
           Q IREEV T+G+Y +VLVFEAKAL L DF +RQAKF SFFGP ITA++  G  ENLYEV+
Sbjct: 213 QLIREEVLTDGRYCVVLVFEAKALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVR 272

Query: 285 LVVN 274
           L+ N
Sbjct: 273 LISN 276


>tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 286

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -1

Query: 462 QAIREEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVK 286
           Q IREEV T+G+Y +VLVFEAKAL L DF +RQAKF SFFGP ITA++  G  ENLYEV+
Sbjct: 213 QLIREEVLTDGRYCVVLVFEAKALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVR 272

Query: 285 LVVN 274
           L+ N
Sbjct: 273 LISN 276