BP917878 |
Clone id |
YMU001_000106_G01 |
Library |
YMU01 |
Length |
514 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_G01. |
Accession |
BP917878 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL585Contig1 |
Sequence |
TGCAAGGCTTTCACAACAATTAGCTGTTCTCTTATCTCAAGGATTAGGCCTTAAAGGGGA GGATATTGTGAAAGAGTATGTGGATGATGTAGGCACACCCGCATTGAAGATAAGTCATTA TCCTCCATGCCCGGAACCCACCAAAATACTTGGCCTGCCTCCTCATTCTGATGTGTCGAT TCTAACCTTGTTGTGGCAAGATCAAGTGGGAGGTCTACAAGTGAGGCTGAATGGAGATTG GGTGACGATTAAGCCAAGACAAGATGCCTTAGTGGTCAACATTGGAGATGTTTTTCAGGT GTGGAGCAATGATTGTTATATTAGTGGAGTACATCGAGCTACTCTAAATGCAAGAGAGCC TCGTTACTCAATTGGCTACTTTTACTATTCAGGGAAGGAATCAATGCTCACTCCCATCTC AGAATTGTTGAAGCAAAGAGAAGAAAGTTCAAAATTTCGCAGCACACTTTTATCAGAGCA TCGAAGTTATGCCTACTCAAAAGTCGGTAAAGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49561 |
Definition |
sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana |
Align length |
169 |
Score (bit) |
114.0 |
E-value |
4.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9LY20 |
Definition |
tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Selaginella moellendorffii |
Align length |
144 |
Score (bit) |
129.0 |
E-value |
7.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917878|Adiantum capillus-veneris mRNA, clone: YMU001_000106_G01. (514 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Se... 129 7e-29 tr|A2YSK1|A2YSK1_ORYSI Putative uncharacterized protein OS=Oryza... 126 7e-28 tr|A3QRM4|A3QRM4_SOYBN Senescence-associated nodulin 1A OS=Glyci... 123 6e-27 tr|A3QRM3|A3QRM3_SOYBN Senescence-associated nodulin 1A OS=Glyci... 123 6e-27 tr|A9TYR5|A9TYR5_PHYPA Predicted protein OS=Physcomitrella paten... 122 8e-27 tr|A3QRM2|A3QRM2_SOYBN Senescence-associated nodulin 1B OS=Glyci... 122 8e-27 tr|Q9LJ66|Q9LJ66_ARATH Oxylase-like protein (Putative uncharacte... 122 1e-26 tr|Q5D0G3|Q5D0G3_SPIOL Gibberellin 2-oxidase 3 OS=Spinacia olera... 121 2e-26 tr|Q9SHG1|Q9SHG1_ARATH Very similar to SRG1 OS=Arabidopsis thali... 120 3e-26 tr|Q8GXN0|Q8GXN0_ARATH SRG1 like protein OS=Arabidopsis thaliana... 120 3e-26 tr|A7P9B6|A7P9B6_VITVI Chromosome chr3 scaffold_8, whole genome ... 120 3e-26 tr|A5BHZ4|A5BHZ4_VITVI Putative uncharacterized protein OS=Vitis... 120 3e-26 tr|A9NYW4|A9NYW4_PICSI Putative uncharacterized protein OS=Picea... 120 4e-26 tr|Q6AV32|Q6AV32_ORYSJ Os03g0618300 protein OS=Oryza sativa subs... 120 5e-26 tr|A3AKG0|A3AKG0_ORYSJ Putative uncharacterized protein OS=Oryza... 120 5e-26 tr|A2XJL0|A2XJL0_ORYSI Putative uncharacterized protein OS=Oryza... 120 5e-26 tr|A9S5X4|A9S5X4_PHYPA Predicted protein (Fragment) OS=Physcomit... 119 7e-26 tr|A9NNT1|A9NNT1_PICSI Putative uncharacterized protein OS=Picea... 119 7e-26 tr|A7P9B4|A7P9B4_VITVI Chromosome chr3 scaffold_8, whole genome ... 119 7e-26 tr|B6TF99|B6TF99_MAIZE Gibberellin 20 oxidase 2 OS=Zea mays PE=2... 119 9e-26 tr|B4FV70|B4FV70_MAIZE Putative uncharacterized protein OS=Zea m... 119 9e-26 tr|A9TQE0|A9TQE0_PHYPA Predicted protein OS=Physcomitrella paten... 119 9e-26 tr|A9T893|A9T893_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|A7PNH8|A7PNH8_VITVI Chromosome chr1 scaffold_22, whole genome... 119 1e-25 tr|A7P9D1|A7P9D1_VITVI Chromosome chr3 scaffold_8, whole genome ... 119 1e-25 tr|A5BF50|A5BF50_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5BD50|A5BD50_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5B596|A5B596_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5BHZ5|A5BHZ5_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25
>tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Selaginella moellendorffii PE=2 SV=1 Length = 397
Score = 129 bits (325), Expect = 7e-29 Identities = 61/144 (42%), Positives = 92/144 (63%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +L Q + L++ LGL+ + + + T + +HYPPCP P+K LGL HSD S + Sbjct: 220 KLGQSVVQLIALSLGLERRTFSRHFEESSST--FRWNHYPPCPLPSKALGLLAHSDPSAI 277
Query: 185 TLLWQDQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREPR 364 T+L QD VGGLQ+R +G W+ +KPR D V+N+GDVFQ W+N Y S HRA +N ++ R Sbjct: 278 TILHQDSVGGLQIRKDGRWIAVKPRPDTFVINLGDVFQAWTNGRYKSVEHRAVVNQKQGR 337
Query: 365 YSIGYFYYSGKESMLTPISELLKQ 436 S+ +FY ++ ++TP EL+ + Sbjct: 338 LSMVFFYGPQEDYVITPPDELIDE 361
>tr|A2YSK1|A2YSK1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28301 PE=3 SV=1 Length = 392
Score = 126 bits (316), Expect = 7e-28 Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 2/145 (1%) Frame = +2
Query: 8 LSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSILT 187 L+ +L L+++ LGL+ D + + +D T ++++HYPPCP P LGL H D LT Sbjct: 204 LAFKLLELIARSLGLR-PDRLHGFFEDHQTTFIRLNHYPPCPSPDLALGLGHHKDAGALT 262
Query: 188 LLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREP 361 +L+QD VGGL VR +G+WV ++P + ++NIGD+ QVWSND Y S HR +N + Sbjct: 263 VLYQDAVGGLDVRRRCDGEWVRVRPIPQSFIINIGDIIQVWSNDRYESVEHRVVVNVEKE 322
Query: 362 RYSIGYFYYSGKESMLTPISELLKQ 436 R+SI +F+Y +M+ P+ E++ + Sbjct: 323 RFSIPFFFYPASYTMVEPLEEVMSE 347
>tr|A3QRM4|A3QRM4_SOYBN Senescence-associated nodulin 1A OS=Glycine max GN=SAN1A PE=2 SV=1 Length = 352
Score = 123 bits (308), Expect = 6e-27 Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 2/154 (1%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +LS +L L++ LGL+ + + ++ D T ++++HYPPCP P LG+ H D L Sbjct: 169 KLSFKLLELIALSLGLEAKRFEEFFIKDQ-TSFIRLNHYPPCPYPDLALGVGRHKDPGAL 227
Query: 185 TLLWQDQVGGLQVRLNGD--WVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 358 T+L QD+VGGL+VR D W+ +KP +A ++NIGD QVWSND Y S HR +N+ + Sbjct: 228 TILAQDEVGGLEVRRKRDQEWIRVKPTPNAYIINIGDTVQVWSNDAYESVDHRVVVNSEK 287
Query: 359 PRYSIGYFYYSGKESMLTPISELLKQREESSKFR 460 R SI +F++ ++ + P+ EL+ + + SK+R Sbjct: 288 ERLSIPFFFFPAHDTKVKPLEELINE-QNPSKYR 320
>tr|A3QRM3|A3QRM3_SOYBN Senescence-associated nodulin 1A OS=Glycine max GN=SAN1A PE=3 SV=1 Length = 352
Score = 123 bits (308), Expect = 6e-27 Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 2/154 (1%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +LS +L L++ LGL+ + + ++ D T ++++HYPPCP P LG+ H D L Sbjct: 169 KLSFKLLELIALSLGLEAKRFEEFFIKDQ-TSFIRLNHYPPCPYPDLALGVGRHKDPGAL 227
Query: 185 TLLWQDQVGGLQVRLNGD--WVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 358 T+L QD+VGGL+VR D W+ +KP +A ++NIGD QVWSND Y S HR +N+ + Sbjct: 228 TILAQDEVGGLEVRRKRDQEWIRVKPTPNAYIINIGDTVQVWSNDAYESVDHRVVVNSEK 287
Query: 359 PRYSIGYFYYSGKESMLTPISELLKQREESSKFR 460 R SI +F++ ++ + P+ EL+ + + SK+R Sbjct: 288 ERLSIPFFFFPAHDTKVKPLEELINE-QNPSKYR 320
>tr|A9TYR5|A9TYR5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152744 PE=3 SV=1 Length = 306
Score = 122 bits (307), Expect = 8e-27 Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 1/167 (0%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +L+ Q+ L +QGLGL + +K + G ++++YPPCP + LGL H+D ++L Sbjct: 118 KLAMQILELTAQGLGLPSDTFIKPFNGTAGDCIARMNYYPPCPLSSLTLGLGAHTDPNLL 177
Query: 185 TLLWQDQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREPR 364 T+L Q +VGGLQV NG W+++KP+ D L++NIGD F+ W+N + S HRA +N E R Sbjct: 178 TILSQCKVGGLQVCKNGTWISVKPKPDTLIINIGDTFEAWTNGRFCSVEHRAVVNESEAR 237
Query: 365 YSIGYFYYSGKESMLTPISELLKQREESSKFR-STLLSEHRSYAYSK 502 S+ YF +S++ I E L + +FR S E++S+ + + Sbjct: 238 MSLVYFASPPSKSVI-QIPEQLITAKHPLRFRPSFTWEEYKSHLFKR 283
>tr|A3QRM2|A3QRM2_SOYBN Senescence-associated nodulin 1B OS=Glycine max GN=SAN1B PE=3 SV=1 Length = 353
Score = 122 bits (307), Expect = 8e-27 Identities = 61/154 (39%), Positives = 100/154 (64%), Gaps = 2/154 (1%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +LS +L L++ LGL+ + + ++ D T L++++YPPCP P LG+ H D L Sbjct: 169 KLSFKLMELIALNLGLEAKRFEEFFIKDQ-TSFLRLNYYPPCPYPHLALGVGRHKDSGPL 227
Query: 185 TLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 358 T+L QD+VGGL+VR + DW+ +KP +A ++N+GD+ QVWSND Y S HR +N+ + Sbjct: 228 TILAQDEVGGLEVRPKADQDWIRVKPIPNAYIINLGDMIQVWSNDAYESVEHRVVVNSEK 287
Query: 359 PRYSIGYFYYSGKESMLTPISELLKQREESSKFR 460 R+SI +F + ++++ P+ EL+ + + SKFR Sbjct: 288 ARFSIPFFLFPAHDTVVKPLEELINE-QNPSKFR 320
>tr|Q9LJ66|Q9LJ66_ARATH Oxylase-like protein (Putative uncharacterized protein At3g19000) OS=Arabidopsis thaliana GN=At3g19000 PE=2 SV=1 Length = 352
Score = 122 bits (305), Expect = 1e-26 Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 2/146 (1%) Frame = +2
Query: 5 RLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSIL 184 +L+ +L L+S LGL G+ + + + T L+ +HYPPCP P LG+ H D L Sbjct: 171 KLAFRLLELVSISLGLPGDRLTGFFNEQ--TSFLRFNHYPPCPNPELALGVGRHKDGGAL 228
Query: 185 TLLWQDQVGGLQV--RLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 358 T+L QD VGGLQV R +G W+ +KP DAL++N+G+ QVW+ND Y S HR +N + Sbjct: 229 TVLAQDSVGGLQVSRRSDGQWIPVKPISDALIINMGNCIQVWTNDEYWSAEHRVVVNTSK 288
Query: 359 PRYSIGYFYYSGKESMLTPISELLKQ 436 R+SI +F++ E+ + P+ EL+ + Sbjct: 289 ERFSIPFFFFPSHEANIEPLEELISE 314
>tr|Q5D0G3|Q5D0G3_SPIOL Gibberellin 2-oxidase 3 OS=Spinacia oleracea PE=2 SV=1 Length = 375
Score = 121 bits (303), Expect = 2e-26 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2
Query: 2 ARLSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSI 181 + L+ +LA +L + LG ++E T L+++ YPPCP+ + +LGL PH+D Sbjct: 200 SELANKLANILVEKLGHDELTFIEEKCSP-NTCYLRMNRYPPCPKYSHVLGLMPHTDSDF 258
Query: 182 LTLLWQDQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREP 361 LT+L+QDQVGGLQ+ +G W+++KP +AL+VNIGD+FQ WSN Y S VHR N R Sbjct: 259 LTILYQDQVGGLQLVKDGRWISVKPNPEALIVNIGDLFQAWSNGVYKSVVHRVVANPRFE 318
Query: 362 RYSIGYFYYSGKESMLTPISELLKQREES-SKFRSTLLSEHRSYAYSKVG 508 R+S YF ++++ E R+ S ++R + + R + + K+G Sbjct: 319 RFSTAYFLCPSGDAVIQSYREPSMYRKFSFGEYRQQVQQDVREFGH-KIG 367
>tr|Q9SHG1|Q9SHG1_ARATH Very similar to SRG1 OS=Arabidopsis thaliana GN=F20D23.29 PE=3 SV=1 Length = 346
Score = 120 bits (302), Expect = 3e-26 Identities = 62/170 (36%), Positives = 109/170 (64%), Gaps = 1/170 (0%) Frame = +2
Query: 8 LSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSILT 187 +++ L +++ L +K E++ + + DD+ ++++++YPPCP+P + GL PHSD LT Sbjct: 167 IAKILLAKMAKALQIKPEEVEEIFGDDM-MQSMRMNYYPPCPQPNLVTGLIPHSDAVGLT 225
Query: 188 LLWQ-DQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREPR 364 +L Q ++V GLQ++ NG W +KP Q+A +VN+GDV ++ +N Y S HRA +N + R Sbjct: 226 ILLQVNEVDGLQIKKNGKWFFVKPLQNAFIVNVGDVLEIITNGTYRSIEHRAMVNLEKER 285
Query: 365 YSIGYFYYSGKESMLTPISELLKQREESSKFRSTLLSEHRSYAYSKVGKG 514 SI F+ +G + + P L+ QR+E++KFRS ++ + +S+ KG Sbjct: 286 LSIATFHNTGMDKEIGPARSLV-QRQEAAKFRSLKTKDYLNGLFSRELKG 334
>tr|Q8GXN0|Q8GXN0_ARATH SRG1 like protein OS=Arabidopsis thaliana GN=At1g17010/F20D23_29 PE=2 SV=1 Length = 361
Score = 120 bits (302), Expect = 3e-26 Identities = 62/170 (36%), Positives = 109/170 (64%), Gaps = 1/170 (0%) Frame = +2
Query: 8 LSQQLAVLLSQGLGLKGEDIVKEYVDDVGTPALKISHYPPCPEPTKILGLPPHSDVSILT 187 +++ L +++ L +K E++ + + DD+ ++++++YPPCP+P + GL PHSD LT Sbjct: 182 IAKILLAKMAKALQIKPEEVEEIFGDDM-MQSMRMNYYPPCPQPNLVTGLIPHSDAVGLT 240
Query: 188 LLWQ-DQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAREPR 364 +L Q ++V GLQ++ NG W +KP Q+A +VN+GDV ++ +N Y S HRA +N + R Sbjct: 241 ILLQVNEVDGLQIKKNGKWFFVKPLQNAFIVNVGDVLEIITNGTYRSIEHRAMVNLEKER 300
Query: 365 YSIGYFYYSGKESMLTPISELLKQREESSKFRSTLLSEHRSYAYSKVGKG 514 SI F+ +G + + P L+ QR+E++KFRS ++ + +S+ KG Sbjct: 301 LSIATFHNTGMDKEIGPARSLV-QRQEAAKFRSLKTKDYLNGLFSRELKG 349
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