BP917882 |
Clone id |
YMU001_000106_G07 |
Library |
YMU01 |
Length |
450 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_G07. |
Accession |
BP917882 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3830Contig1 |
Sequence |
AAGAGATGGAAGTGGAAATGTGGTTGGTTTGGAGGGCAGGCTGCATTTAGAGGGCTCTGT AAAGACAACCAAGTTGAAGTTGACATGGTTAGCTGATTTTGCAGAGCTTGTAAATCTTGC TTTGATCGACTTGGATCACCTTATCACCAAGAAAAAGCTAGAAGAAGAAGATGATTTCAT TTCAGTTCTCAACCCAACAACCCGATGGGAAATCCAGGCTCTGGGTGATGCAAATATGAG GAACCTCAAACGTGGTGATATTATTCAGCTAGAGAGAAAGGGCTACTTCATATGTGACTC GCCCTACATAAGGCCATTGAAGCCAATTGCACTTATTGCTATTCCAGATGGAAGACAACG GCCAACCCCAGAACACTTACCTCAAAAGTAATGTTTTGGCTACAAGCACATGCGTATTGA TCTTGTCTTGCATAAAATTTATATTTCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13775 |
Definition |
sp|O13775|SYEC_SCHPO Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe |
Align length |
118 |
Score (bit) |
105.0 |
E-value |
7.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917882|Adiantum capillus-veneris mRNA, clone: YMU001_000106_G07. (450 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O13775|SYEC_SCHPO Probable glutamyl-tRNA synthetase, cytoplas... 105 7e-23 sp|P46655|SYEC_YEAST Glutamyl-tRNA synthetase, cytoplasmic OS=Sa... 102 7e-22 sp|Q54KB8|SYEC_DICDI Probable glutamyl-tRNA synthetase, cytoplas... 98 2e-20 sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=M... 92 1e-18 sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=H... 91 2e-18 sp|P28668|SYEP_DROME Bifunctional aminoacyl-tRNA synthetase OS=D... 84 2e-16 sp|Q2NUP0|SYQ_SODGM Glutaminyl-tRNA synthetase OS=Sodalis glossi... 44 3e-04 sp|Q3Z4C0|SYQ_SHISS Glutaminyl-tRNA synthetase OS=Shigella sonne... 42 0.002 sp|Q83LY4|SYQ_SHIFL Glutaminyl-tRNA synthetase OS=Shigella flexn... 42 0.002 sp|Q0T6S8|SYQ_SHIF8 Glutaminyl-tRNA synthetase OS=Shigella flexn... 42 0.002 sp|Q32IQ0|SYQ_SHIDS Glutaminyl-tRNA synthetase OS=Shigella dysen... 42 0.002 sp|Q324M4|SYQ_SHIBS Glutaminyl-tRNA synthetase OS=Shigella boydi... 42 0.002 sp|Q1REN7|SYQ_ECOUT Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|P00962|SYQ_ECOLI Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|B1IY48|SYQ_ECOLC Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8FJW4|SYQ_ECOL6 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q0TK03|SYQ_ECOL5 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A1A8U7|SYQ_ECOK1 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A7ZXU0|SYQ_ECOHS Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8X9H8|SYQ_ECO57 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A7ZJ63|SYQ_ECO24 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8ZQX5|SYQ_SALTY Glutaminyl-tRNA synthetase OS=Salmonella typ... 40 0.006 sp|Q8Z8F8|SYQ_SALTI Glutaminyl-tRNA synthetase OS=Salmonella typ... 40 0.006 sp|A9MUG5|SYQ_SALPB Glutaminyl-tRNA synthetase OS=Salmonella par... 40 0.006 sp|Q5PCH8|SYQ_SALPA Glutaminyl-tRNA synthetase OS=Salmonella par... 40 0.006 sp|A8AJD6|SYQ_CITK8 Glutaminyl-tRNA synthetase OS=Citrobacter ko... 40 0.006 sp|Q57RP8|SYQ_SALCH Glutaminyl-tRNA synthetase OS=Salmonella cho... 39 0.008 sp|A4W846|SYQ_ENT38 Glutaminyl-tRNA synthetase OS=Enterobacter s... 39 0.008 sp|A6T6C3|SYQ_KLEP7 Glutaminyl-tRNA synthetase OS=Klebsiella pne... 38 0.017 sp|P43831|SYQ_HAEIN Glutaminyl-tRNA synthetase OS=Haemophilus in... 38 0.017
>sp|O13775|SYEC_SCHPO Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC17A5.15c PE=1 SV=1 Length = 716
Score = 105 bits (263), Expect = 7e-23 Identities = 54/118 (45%), Positives = 73/118 (61%) Frame = +2
Query: 2 RDGSGNVVGLEGRLHLEGSVKTTKLKLTWLADFAELVNLALIDLDHLITKKKLEEEDDFI 181 RD SG V L+ LHL+G K T+ K+TWLAD + + L+D D+LITK KLEE +++ Sbjct: 592 RDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYK 651
Query: 182 SVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGR 355 L P T + D ++NLK+GDIIQ+ERKGY+I D P+ L IPDG+ Sbjct: 652 DFLTPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVDVPF--DGTQAVLFNIPDGK 707
>sp|P46655|SYEC_YEAST Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=GUS1 PE=1 SV=3 Length = 708
Score = 102 bits (254), Expect = 7e-22 Identities = 51/106 (48%), Positives = 70/106 (66%) Frame = +2
Query: 38 RLHLEGSVKTTKLKLTWLADFAELVNLALIDLDHLITKKKLEEEDDFISVLNPTTRWEIQ 217 +L+LEG K TK KLTWLAD ++V + L+D DHLITK +LEE++ F L P T + Sbjct: 595 KLNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTD 654
Query: 218 ALGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGR 355 A+ D N++++K GDIIQ ERKGY+ D+ + KP IPDG+ Sbjct: 655 AIADLNVKDMKIGDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699
>sp|Q54KB8|SYEC_DICDI Probable glutamyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=gluS PE=2 SV=1 Length = 764
Score = 97.8 bits (242), Expect = 2e-20 Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Frame = +2
Query: 2 RDGSGNVVGLEGRLHLEGSVKTTKLKLTWLA-DFAELVNLALIDLDHLITKKKLEEEDDF 178 R+ +G+VV + G+LHLEG VK T KL+WL+ D A+ V + L D D++ITK KLE+ DD Sbjct: 611 RNENGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDL 670
Query: 179 ISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGRQ 358 + N +++EI+A D N+ LK D IQ ER+G+F D +KP LI IP G Sbjct: 671 DTFTNKNSKFEIEAFTDENILTLKLNDKIQFERRGFFNVDQ-VGDGVKPYILIYIPSGPI 729
Query: 359 RP 364 +P Sbjct: 730 KP 731
>sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus GN=Eprs PE=2 SV=3 Length = 1512
Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 8/131 (6%) Frame = +2
Query: 2 RDGSGNVVGLEGRLHLEGSVKTTKLKLTWLADFAELVNL--ALIDLDHLITKKKLEEEDD 175 ++ G + L+ +L+LE K+TWLA+ +++ + +HLITK L +++D Sbjct: 581 KNADGKITSLDAKLNLENKDYKKTTKITWLAESTHALSIPAVCVTYEHLITKPVLGKDED 640
Query: 176 FISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPY--IRPLK----PIALI 337 F +N ++ E LGD +++LK+GDIIQL+R+G+FICD PY + P P LI Sbjct: 641 FKQYINKDSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCREAPCILI 700
Query: 338 AIPDGRQRPTP 370 IPDG + P Sbjct: 701 YIPDGHTKEMP 711
>sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=3 Length = 1512
Score = 90.9 bits (224), Expect = 2e-18 Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 8/131 (6%) Frame = +2
Query: 2 RDGSGNVVGLEGRLHLEGSVKTTKLKLTWLADFAELVNLALIDL--DHLITKKKLEEEDD 175 ++ G ++ L+ + +LE K+TWLA+ + + +I + +HLITK L +++D Sbjct: 581 KNADGKIISLDAKFNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLITKPVLGKDED 640
Query: 176 FISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPY--IRPLK----PIALI 337 F +N ++ E LGD +++LK+GDIIQL+R+G+FICD PY + P P LI Sbjct: 641 FKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLI 700
Query: 338 AIPDGRQRPTP 370 IPDG + P Sbjct: 701 YIPDGHTKEMP 711
>sp|P28668|SYEP_DROME Bifunctional aminoacyl-tRNA synthetase OS=Drosophila melanogaster GN=Aats-glupro PE=1 SV=2 Length = 1714
Score = 84.3 bits (207), Expect = 2e-16 Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 9/132 (6%) Frame = +2
Query: 2 RDGSGNVVGLEGRLHLEGSVKTTKLKLTWLA---DFAELVNLALIDLDHLITKKKLEEED 172 +D SGN+ ++ L+LE LKLTWLA D + + D++I+K L +++ Sbjct: 587 KDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAVLGKDE 646
Query: 173 DFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIRPL------KPIAL 334 DF + TR E+ LGD ++ K+GDIIQL+R+G+F D Y P PI L Sbjct: 647 DFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPSPIVL 706
Query: 335 IAIPDGRQRPTP 370 +IPDG + P Sbjct: 707 FSIPDGHTKDVP 718
>sp|Q2NUP0|SYQ_SODGM Glutaminyl-tRNA synthetase OS=Sodalis glossinidius (strain morsitans) GN=glnS PE=3 SV=1 Length = 556
Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/65 (33%), Positives = 32/65 (49%) Frame = +2
Query: 134 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 313 D L ++ +DF+S LNP + Q +A + G+ Q ER+GYF DS Y Sbjct: 475 DRLFSEANPAAAEDFLSTLNPDSLVIRQGFVEAGVPAANTGEPFQFEREGYFCADSRYFS 534
Query: 314 PLKPI 328 P P+ Sbjct: 535 PTHPV 539
>sp|Q3Z4C0|SYQ_SHISS Glutaminyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +2
Query: 134 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 313 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 314 PLKPI 328 KP+ Sbjct: 534 AEKPV 538
>sp|Q83LY4|SYQ_SHIFL Glutaminyl-tRNA synthetase OS=Shigella flexneri GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +2
Query: 134 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 313 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 314 PLKPI 328 KP+ Sbjct: 534 AEKPV 538
>sp|Q0T6S8|SYQ_SHIF8 Glutaminyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +2
Query: 134 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 313 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 314 PLKPI 328 KP+ Sbjct: 534 AEKPV 538
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRU5 |
Definition |
tr|B8LRU5|B8LRU5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
120 |
Score (bit) |
187.0 |
E-value |
3.0e-46 |
Report |
|