BP917884 |
Clone id |
YMU001_000106_G10 |
Library |
YMU01 |
Length |
288 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000106_G10. |
Accession |
BP917884 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTTGAAGATGCTTTAGCTCTGAACAGATGTTGCGGTACAAAGAAGCAACCACAGAGATT CTGCCTAATCTATGAAATTTTGGTTTTCCCTATGGAAGTTTCTTTTTGCATTGGTCCCAC CACCTAATGTCTGCCACGGTTGGGTGGCTTTTGTCTCATCTCTGTTTAACATCACGGCGA TTAGCTATGTGGTCACACAACTGACCAACTTACTCGGAGATGTAACAGGGATAAGCTCCT TCGTCATTGCTCTTACAGTGGTAGCAACTGGAGCTTCATGGCCTGATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P70549 |
Definition |
sp|P70549|NAC3_RAT Sodium/calcium exchanger 3 OS=Rattus norvegicus |
Align length |
72 |
Score (bit) |
59.3 |
E-value |
6.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q0E3 |
Definition |
tr|A7Q0E3|A7Q0E3_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
73 |
Score (bit) |
90.5 |
E-value |
4.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917884|Adiantum capillus-veneris mRNA, clone: YMU001_000106_G10. (288 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q0E3|A7Q0E3_VITVI Chromosome chr7 scaffold_42, whole genome... 91 4e-17 tr|O22252|O22252_ARATH Putative Na+/Ca2+ antiporter (Magnesium/p... 88 2e-16 tr|B8K1V7|B8K1V7_ARAHA Transporter MHX OS=Arabidopsis halleri su... 87 4e-16 tr|B4G0C9|B4G0C9_MAIZE Putative uncharacterized protein OS=Zea m... 86 7e-16 tr|Q2R041|Q2R041_ORYSJ Magnesium/proton exchanger, putative, exp... 82 1e-14 tr|Q2R040|Q2R040_ORYSJ Magnesium/proton exchanger, putative, exp... 82 1e-14 tr|A3CDM4|A3CDM4_ORYSJ Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|A2X7R8|A2X7R8_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|Q6H641|Q6H641_ORYSJ Putative magnesium/proton exchanger OS=Or... 82 1e-14 tr|Q0DZ55|Q0DZ55_ORYSJ Os02g0644900 protein OS=Oryza sativa subs... 82 1e-14 tr|A3A9J5|A3A9J5_ORYSJ Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|A2X7S5|A2X7S5_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|A9T4C9|A9T4C9_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 3e-14 tr|A9RGA0|A9RGA0_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 2e-13 tr|A7RSI7|A7RSI7_NEMVE Predicted protein OS=Nematostella vectens... 63 6e-09 tr|B6M661|B6M661_BRAFL Putative uncharacterized protein OS=Branc... 61 2e-08 tr|B3RPP9|B3RPP9_TRIAD Putative uncharacterized protein OS=Trich... 61 2e-08 tr|B3KU59|B3KU59_HUMAN cDNA FLJ39234 fis, clone OCBBF2007762, hi... 60 5e-08 tr|Q7TS90|Q7TS90_MOUSE Putative uncharacterized protein OS=Mus m... 59 9e-08 tr|Q3UTP5|Q3UTP5_MOUSE Putative uncharacterized protein OS=Mus m... 59 9e-08 tr|Q21895|Q21895_CAEEL Protein ZC168.1, partially confirmed by t... 59 1e-07 tr|Q96QG2|Q96QG2_HUMAN Sodium/calcium exchanger SCL8A3 OS=Homo s... 58 3e-07 tr|Q96QG1|Q96QG1_HUMAN Sodium/calcium exchanger SCL8A3 OS=Homo s... 58 3e-07 tr|Q86Y47|Q86Y47_HUMAN Na+/Ca2+ exchanger isoform 4 (Fragment) O... 58 3e-07 tr|Q5K3P7|Q5K3P7_HUMAN Na+/Ca2+ exchanger 3 OS=Homo sapiens GN=S... 58 3e-07 tr|Q5K3P6|Q5K3P6_HUMAN Na+/Ca2+ exchanger 3 OS=Homo sapiens GN=S... 58 3e-07 tr|B3KV80|B3KV80_HUMAN cDNA FLJ16234 fis, clone FEBRA2028503, hi... 58 3e-07 tr|A7E249|A7E249_HUMAN SLC8A3 protein (Fragment) OS=Homo sapiens... 58 3e-07 tr|A7E240|A7E240_HUMAN SLC8A3 protein (Fragment) OS=Homo sapiens... 58 3e-07 tr|A8XRM5|A8XRM5_CAEBR CBR-NCX-3 protein OS=Caenorhabditis brigg... 57 4e-07
>tr|A7Q0E3|A7Q0E3_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028017001 PE=4 SV=1 Length = 560
Score = 90.5 bits (223), Expect = 4e-17 Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 3/73 (4%) Frame = +3
Query: 78 FWFSL---WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVI 248 FW L W+FLFA VPPP++ HGW AF+ SL I+ I+Y+VT+LT+L+ +GI+S+VI Sbjct: 366 FWQLLLLPWRFLFAFVPPPHIAHGWFAFICSLIFISGIAYIVTKLTDLISCTSGINSYVI 425
Query: 249 ALTVVATGASWPD 287 A T +A G SWPD Sbjct: 426 AFTALAAGTSWPD 438
>tr|O22252|O22252_ARATH Putative Na+/Ca2+ antiporter (Magnesium/proton exchanger AtMHX) OS=Arabidopsis thaliana GN=At2g47600 PE=2 SV=3 Length = 539
Score = 88.2 bits (217), Expect = 2e-16 Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 3/73 (4%) Frame = +3
Query: 78 FWFSL---WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVI 248 FW L WK LFA VPP N+ HGW+AF+ SL I+ +++VVT+ T+L+ VTGI+ +VI Sbjct: 345 FWHLLLAPWKLLFAFVPPCNIAHGWIAFICSLLFISGVAFVVTRFTDLISCVTGINPYVI 404
Query: 249 ALTVVATGASWPD 287 A T +A+G SWPD Sbjct: 405 AFTALASGTSWPD 417
>tr|B8K1V7|B8K1V7_ARAHA Transporter MHX OS=Arabidopsis halleri subsp. halleri GN=MHX PE=2 SV=1 Length = 539
Score = 87.0 bits (214), Expect = 4e-16 Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 3/73 (4%) Frame = +3
Query: 78 FWFSL---WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVI 248 FW L WK LFA VPP N+ HGW+AF+ SL I+ +++VVT+ T+L+ VTGI+ +VI Sbjct: 345 FWQLLLAPWKLLFAFVPPCNIAHGWIAFIFSLLFISGVAFVVTRFTDLISCVTGINPYVI 404
Query: 249 ALTVVATGASWPD 287 A T +A+G SWPD Sbjct: 405 AFTALASGTSWPD 417
>tr|B4G0C9|B4G0C9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 536
Score = 86.3 bits (212), Expect = 7e-16 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 3/73 (4%) Frame = +3
Query: 78 FW---FSLWKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVI 248 FW + WKFLFA VPP ++ HGW+AF+ SL I+ I+Y VT+LT+ + VTG+S +VI Sbjct: 342 FWNLIIAPWKFLFAFVPPYHIAHGWIAFICSLIFISGIAYGVTKLTDQISCVTGVSPYVI 401
Query: 249 ALTVVATGASWPD 287 A T +A G SWPD Sbjct: 402 AFTALAAGTSWPD 414
>tr|Q2R041|Q2R041_ORYSJ Magnesium/proton exchanger, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0660000 PE=4 SV=1 Length = 523
Score = 82.4 bits (202), Expect = 1e-14 Identities = 35/65 (53%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA VPP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 337 WKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 396
Query: 273 ASWPD 287 SWPD Sbjct: 397 TSWPD 401
>tr|Q2R040|Q2R040_ORYSJ Magnesium/proton exchanger, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g43860 PE=4 SV=1 Length = 434
Score = 82.4 bits (202), Expect = 1e-14 Identities = 35/65 (53%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA VPP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 337 WKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 396
Query: 273 ASWPD 287 SWPD Sbjct: 397 TSWPD 401
>tr|A3CDM4|A3CDM4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033396 PE=4 SV=1 Length = 459
Score = 82.4 bits (202), Expect = 1e-14 Identities = 35/65 (53%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA VPP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 273 WKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 332
Query: 273 ASWPD 287 SWPD Sbjct: 333 TSWPD 337
>tr|A2X7R8|A2X7R8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08262 PE=4 SV=1 Length = 518
Score = 82.4 bits (202), Expect = 1e-14 Identities = 35/65 (53%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA VPP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 332 WKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 391
Query: 273 ASWPD 287 SWPD Sbjct: 392 TSWPD 396
>tr|Q6H641|Q6H641_ORYSJ Putative magnesium/proton exchanger OS=Oryza sativa subsp. japonica GN=P0030D07.11 PE=4 SV=1 Length = 429
Score = 82.0 bits (201), Expect = 1e-14 Identities = 34/65 (52%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA +PP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 332 WKMLFAFIPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 391
Query: 273 ASWPD 287 SWPD Sbjct: 392 TSWPD 396
>tr|Q0DZ55|Q0DZ55_ORYSJ Os02g0644900 protein OS=Oryza sativa subsp. japonica GN=Os02g0644900 PE=4 SV=1 Length = 117
Score = 82.0 bits (201), Expect = 1e-14 Identities = 34/65 (52%), Positives = 47/65 (72%) Frame = +3
Query: 93 WKFLFALVPPPNVCHGWVAFVSSLFNITAISYVVTQLTNLLGDVTGISSFVIALTVVATG 272 WK LFA +PP + HGW+AF+ SL I+ I+Y VT++T+ + VTG+S +VIA T +A G Sbjct: 20 WKMLFAFIPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 79
Query: 273 ASWPD 287 SWPD Sbjct: 80 TSWPD 84
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