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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917886
Clone id YMU001_000106_G12
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTACATCATCTCATTTTGGCGTCCCGGGAGCTCCATTTTCCGTTCTCCCCTTCTTGGAT
GTGAATGAAGTAGACACACTTTTCGCCACATACTTTCCGGCTTTGCCAATTCCACTACCC
ACCATGCCAACCCCACCAGCAACTACACTGGCTCCTCCAACCACCAGTTTCCCTGCTCCC
CCGACAGCTCCTCCAATCACATCAATAGTCCCACCAATCAAGCCTTCTTCTGCAGCTTTC
CTTTTCTCGGCTAGAATTGCCTGTTCTTTCTCCATTGCTTCCTTCTGCTGCTCTTTTGAA
TAAATTTCGTACGTAACCTTGAGAAATAGATGGCCACGATCCCGTTTGTCCACAACATGA
TCCA
■■Homology search results ■■ -
sp_hit_id Q5R9W4
Definition sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein 9 OS=Pongo abelii
Align length 33
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917886|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_G12.
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein ...    30   3.8  
sp|Q96SU4|OSBL9_HUMAN Oxysterol-binding protein-related protein ...    30   3.8  
sp|Q49537|VLPE_MYCHR Variant surface antigen E OS=Mycoplasma hyo...    29   8.4  
sp|O70608|SYCP2_RAT Synaptonemal complex protein 2 OS=Rattus nor...    29   8.4  
sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase...    29   8.4  

>sp|Q5R9W4|OSBL9_PONAB Oxysterol-binding protein-related protein 9
           OS=Pongo abelii GN=OSBPL9 PE=2 SV=1
          Length = 736

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 120 HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           HH  PT N TG S H  P S  +S +H+N   N
Sbjct: 250 HHQTPTPNSTG-SGHSPPTSSLTSPSHVNLSPN 281


>sp|Q96SU4|OSBL9_HUMAN Oxysterol-binding protein-related protein 9
           OS=Homo sapiens GN=OSBPL9 PE=1 SV=2
          Length = 736

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 120 HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           HH  PT N TG S H  P S  +S +H+N   N
Sbjct: 250 HHQTPTPNSTG-SGHSPPSSSLTSPSHVNLSPN 281


>sp|Q49537|VLPE_MYCHR Variant surface antigen E OS=Mycoplasma
           hyorhinis GN=vlpE PE=4 SV=1
          Length = 243

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 105 ANSTT---HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           +N TT    H+NP++  T    H  P +P +S    ++P+N
Sbjct: 153 SNPTTSDGQHSNPSNPTTSDGQHSNPSNPTTSDGQHSNPSN 193



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 105 ANSTT---HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           +N TT    H+NP++  T    H  P +P +S    ++P+N
Sbjct: 166 SNPTTSDGQHSNPSNPTTSDGQHSNPSNPTTSDGQHSNPSN 206



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 105 ANSTT---HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           +N TT    H+NP++  T    H  P +P +S    ++P+N
Sbjct: 179 SNPTTSDGQHSNPSNPTTSDGQHSNPSNPTTSDGQHSNPSN 219



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 105 ANSTT---HHANPTSNYTGSSNHQFPCSPDSSSNHINSPTN 218
           +N TT    H+NP++  T    H  P +P +S    ++P+N
Sbjct: 192 SNPTTSDGQHSNPSNPTTSDGQHSNPSNPTTSDGQHSNPSN 232


>sp|O70608|SYCP2_RAT Synaptonemal complex protein 2 OS=Rattus
            norvegicus GN=Sycp2 PE=1 SV=1
          Length = 1505

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 108  NSTTHHANPTSNYTGSSNHQF---PCSPDSSSNHINS 209
            N  T H N  S+ + +S+ +    P SPDS  NH+ S
Sbjct: 1192 NQRTQHCNSYSDVSSNSSEKLYMEPESPDSCENHVQS 1228


>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G
            OS=Dictyostelium discoideum GN=dhkG PE=3 SV=1
          Length = 3432

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 108  NSTTHHANPTSNYTGSSNHQFPCSPDSSSNHINSPTNQAFFCS 236
            N+  ++ N  +N   ++N+   CS   S N INS  N  F CS
Sbjct: 2797 NNNNNNNNNNNNNNNNNNNNINCSNGGSVN-INSSGNSVFSCS 2838
tr_hit_id B4Q148
Definition tr|B4Q148|B4Q148_DROYA GE17545 OS=Drosophila yakuba
Align length 49
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917886|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_G12.
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4Q148|B4Q148_DROYA GE17545 OS=Drosophila yakuba GN=GE17545 P...    35   1.9  
tr|A6SGI0|A6SGI0_BOTFB Predicted protein OS=Botryotinia fuckelia...    34   3.2  
tr|Q9IBF0|Q9IBF0_ANGJA Wilms' tumor protein OS=Anguilla japonica...    34   3.2  
tr|Q5BWV9|Q5BWV9_SCHJA SJCHGC09604 protein (Fragment) OS=Schisto...    34   3.2  
tr|A2EY09|A2EY09_TRIVA Putative uncharacterized protein OS=Trich...    34   4.2  
tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc...    33   7.2  
tr|B3NXZ3|B3NXZ3_DROER GG17640 OS=Drosophila erecta GN=GG17640 P...    33   7.2  
tr|B6PS91|B6PS91_BRAFL Putative uncharacterized protein OS=Branc...    33   9.3  

>tr|B4Q148|B4Q148_DROYA GE17545 OS=Drosophila yakuba GN=GE17545 PE=4
           SV=1
          Length = 343

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +3

Query: 96  SGFANSTTHHANPTSNYTGSSNHQFPCSPDSSSNHINSPTNQAFFCSFP 242
           S F N+ T   N T+N T S N  F  +P SS N  N+PT+   F + P
Sbjct: 145 SNFTNNPTGSGNFTNNPTSSGN--FTNNPTSSGNFNNNPTSSGHFTNNP 191


>tr|A6SGI0|A6SGI0_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_11461 PE=4 SV=1
          Length = 649

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 306 NLFKRAAEGSNGERTGNSSREKESCRRRLDWWDY*CDWRSCRGSRETGGWRS 151
           NLF   +E SN  + G+ + EK   RRRL+      D  S  G +E   W++
Sbjct: 212 NLFPNTSENSNSRQPGSLNSEKREGRRRLE------DLHSSSGEKEAFSWKN 257


>tr|Q9IBF0|Q9IBF0_ANGJA Wilms' tumor protein OS=Anguilla japonica
           GN=EWT1 PE=2 SV=1
          Length = 392

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +3

Query: 75  HTFRHILSGFANSTTHHANPTSNYTGSSNHQFPCSPDSSSNHINS---PTNQAFFCSFP 242
           HT  H  S F+N T  H +P +  +     QFP  P   S H  S    TNQA     P
Sbjct: 148 HTPSHHASQFSNQTFKHEDPLTQPSNMGEQQFPAPPPVYSCHTPSDSCSTNQALLLRNP 206


>tr|Q5BWV9|Q5BWV9_SCHJA SJCHGC09604 protein (Fragment)
           OS=Schistosoma japonicum PE=2 SV=2
          Length = 192

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
 Frame = +3

Query: 111 STTHHANPTSNYTGSSN--------HQFPCSPDSSSNHINSP 212
           ST  + +P SNY G SN        H  P SP SSS+H +SP
Sbjct: 41  STAGYNSPNSNYRGLSNGHSMPPGHHPTPLSPTSSSSHNDSP 82


>tr|A2EY09|A2EY09_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_055660 PE=4 SV=1
          Length = 890

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +3

Query: 24  PGSSIFRSPLLGCE*SRHTFRHILSGFANSTTHHANPTSNYTGSSNHQFPCSPDSSSNHI 203
           P SS F SPL   +   H F + +S  ++++ + AN +S    +    +  SP SSS+ +
Sbjct: 73  PNSSKFSSPLRKTQVPEHNFSNFVSN-SSTSYYSANKSSQLQSNIETMYTASPQSSSHAV 131

Query: 204 NSPTNQ 221
               NQ
Sbjct: 132 FEDPNQ 137


>tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cycK
           PE=3 SV=1
          Length = 405

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 105 ANSTTHHANPTSNYTGSSNHQFPCSPDSSSNHINS 209
           ANS +HH +PTS+   + N     SP  S++H NS
Sbjct: 353 ANSISHHISPTSSKPSNRNSDHRYSPYKSTHHSNS 387


>tr|B3NXZ3|B3NXZ3_DROER GG17640 OS=Drosophila erecta GN=GG17640 PE=4
           SV=1
          Length = 323

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +3

Query: 96  SGFANSTTHHANPTSNYTGSSNHQFPCSPDSSSNHINSPTNQAFFCS 236
           S  +++ T+H + +SNYT +SN  F  +  SSSN +NS  + + F S
Sbjct: 161 SAGSSNFTNHLSGSSNYT-NSNGNFTSNAASSSNFVNSAASSSSFSS 206


>tr|B6PS91|B6PS91_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_132687 PE=4 SV=1
          Length = 1261

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 300 FKRAAEGSNGERTGNSSREKESCRRRLDWWDY*CDWRSCR 181
           FK   E SNG +    SR +   R++L W+   C W  C+
Sbjct: 266 FKEEKEVSNGNQENGQSRSRRVARQQLSWFT--CVWEGCK 303