BP917888
Clone id YMU001_000106_H04
Library
Length 210
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCACATACATGGGGCTAGCACGGTGGACTATGCTATGGTTCAACCCAATTTTCCACCATC
TATTAATGATTTTACAGTCGGCCCTAGGCCTGTTGGGGTAACAATAGCTCACATGTTTAG
TATAGGTCCGTTGGCCCAGGCATCTACGCATACTCGATACACTTTGACATCGAAGATTCA
CTCTGTCTACGTGGATAGTAGCTACAAACG
■■Homology search results ■■ -
sp_hit_id Q7VMB5
Definition sp|Q7VMB5|NORM_HAEDU Probable multidrug resistance protein norM OS=Haemophilus ducreyi
Align length 20
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917888|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_H04.
(210 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7VMB5|NORM_HAEDU Probable multidrug resistance protein norM ... 29 6.4

>sp|Q7VMB5|NORM_HAEDU Probable multidrug resistance protein norM
OS=Haemophilus ducreyi GN=norM PE=3 SV=1
Length = 463

Score = 29.3 bits (64), Expect = 6.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3

Query: 106 YCYPNRPRADCKIINRWWKI 47
YCY N+P+ D + N+W+++
Sbjct: 214 YCYTNKPQKDIGLFNKWFEM 233


tr_hit_id B0CT64
Definition tr|B0CT64|B0CT64_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 58
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917888|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_H04.
(210 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0CT64|B0CT64_LACBS Predicted protein OS=Laccaria bicolor (st... 33 5.4

>tr|B0CT64|B0CT64_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_306213 PE=4 SV=1
Length = 747

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2

Query: 5 IHGASTVDYAMVQPNFPPSINDFTVGPRPVGVTIAHMFSIGPLAQASTHTRYTLTSKI 178
+ ASTV A + P PS F + RPV + AH +S P+ + LTS I
Sbjct: 311 VQSASTVLAATMSPQIHPS--GFRISDRPVATSFAHPYSFQPVTDFLSRDDACLTSSI 366