BP917891
Clone id YMU001_000106_H07.esd
Library
Length 348
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000106_H07.esd.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTAATAATACTTACCCATGAATGGGCAAAACTTTACAGGCTGAAAATCTGGTGATTATC
AAAACAGCCAAGCGCCCAAGTTAACAGCTTGCTTCATGTTCGAAAGGGTCCTTGAATGCA
GATTACCTACCAGCAACTTCCTCAAGTTCATCCCTTTCAACAGACAGATCCTCTTTATCC
TCCTGAGATGGCTTCAAGACTTCAAGTAAGAACTTTTTAGCAGAATCCTCCTGTGTTCTC
TTTAAGCCAAACAAATCTTCTTTGAGGTGATAGGAACCATTGAAAAAGGACCACAAAATC
TTGGACATGCAACATTGCGGAGTAATGGTCACACTTTCTTCCAGCTGC
■■Homology search results ■■ -
sp_hit_id Q94A18
Definition sp|Q94A18|PDR1_ARATH Pleiotropic drug resistance protein 1 OS=Arabidopsis thaliana
Align length 73
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917891|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_H07.esd.
(348 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94A18|PDR1_ARATH Pleiotropic drug resistance protein 1 OS=Ar... 30 4.8
sp|B0I1T2|MYO1G_HUMAN Myosin-Ig OS=Homo sapiens GN=MYO1G PE=1 SV=1 29 8.3

>sp|Q94A18|PDR1_ARATH Pleiotropic drug resistance protein 1
OS=Arabidopsis thaliana GN=PDR1 PE=2 SV=2
Length = 1416

Score = 29.6 bits (65), Expect = 4.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = -2

Query: 269 HLKEDLFGLKRTQEDSAKKFLLEVLKPSQEDKED-LSVERDELEEVAGR*SAFKDPFEH- 96
H EDL + + D +KF+ + K ++ED E L R+ ++ V + + FE
Sbjct: 60 HPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKFRNRIDRVRIKLPTVEVRFEKV 119

Query: 95 --EASC*LGRLAV 63
EA+C +G+ A+
Sbjct: 120 TIEANCHIGKRAL 132


>sp|B0I1T2|MYO1G_HUMAN Myosin-Ig OS=Homo sapiens GN=MYO1G PE=1 SV=1
Length = 1018

Score = 28.9 bits (63), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2

Query: 83 NSLLHVRKGP*MQITYQQLPQVHPFQQTDPLYPPEMASRLQVRTF*QNPP 232
N L KG + L V+P+Q+ PLY PE +R Q R + PP
Sbjct: 28 NLQLRFEKGRIYTYIGEVLVSVNPYQEL-PLYGPEAIARYQGRELYERPP 76


tr_hit_id Q4TBE6
Definition tr|Q4TBE6|Q4TBE6_TETNG Peptidyl-prolyl cis-trans isomerase OS=Tetraodon nigroviridis
Align length 54
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917891|Adiantum capillus-veneris mRNA, clone:
YMU001_000106_H07.esd.
(348 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4TBE6|Q4TBE6_TETNG Peptidyl-prolyl cis-trans isomerase OS=Te... 34 3.2

>tr|Q4TBE6|Q4TBE6_TETNG Peptidyl-prolyl cis-trans isomerase
OS=Tetraodon nigroviridis GN=GSTENG00003791001 PE=3 SV=1
Length = 409

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -2

Query: 308 MSKILWSFFNGSYHLKEDLFGLKRTQEDSAKKFLLEVLKPSQEDKEDLSVERDE 147
++KI W G Y K+D +++ E +K L E LKP Q+ DL +E +E
Sbjct: 296 VAKIRWKGKGGKY-TKDDFRDYEKSLESRSKLALKEQLKPKQDSSYDLLMEEEE 348