| BP917894 |
| Clone id |
YMU001_000107_A02 |
| Library |
YMU01 |
| Length |
301 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_A02. |
| Accession |
BP917894 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CGTAACTTCTTGTGCTTCTTGCGGAGACCCGCAATGAGCATATGCGTCGATGAGAGCATT
GCCGATAACAGGGTACCTCTCCAATAAACCTAAACTGATGATCACTGAATGTAATCCTTG
AACAATGTTGATATTCTTTATGAGACCACATGCTTTTAAGCTACAGACAAATGCAACTCT
ATCTGGCATTAACCCTTCAAGTTGCATTTGCCGGAAGCATTGCATGGCAGCAGGCCCCTC
CTTGCACTTGGTGTATCCCATAGTCAATGCAGACCATGAAATTCCGTCGTGGACCTTCAT
A |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9SVA5 |
| Definition |
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana |
| Align length |
98 |
| Score (bit) |
68.2 |
| E-value |
1.0e-11 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917894|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_A02.
(301 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei... 68 1e-11
sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containi... 63 5e-10
sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containi... 63 5e-10
sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containi... 62 7e-10
sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protei... 62 7e-10
sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protei... 62 1e-09
sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containi... 61 2e-09
sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protei... 60 3e-09
sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protei... 60 4e-09
sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protei... 59 6e-09
sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protei... 59 8e-09
sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protei... 59 1e-08
sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protei... 58 1e-08
sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protei... 58 1e-08
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi... 58 2e-08
sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protei... 57 2e-08
sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protei... 57 3e-08
sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containi... 57 3e-08
sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protei... 57 4e-08
sp|O82363|PP203_ARATH Pentatricopeptide repeat-containing protei... 56 5e-08
sp|Q9FGL1|PP423_ARATH Putative pentatricopeptide repeat-containi... 55 8e-08
sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protei... 55 8e-08
sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protei... 55 8e-08
sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protei... 55 8e-08
sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei... 55 8e-08
sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protei... 55 1e-07
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei... 55 1e-07
sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containi... 55 1e-07
sp|Q38959|PP257_ARATH Pentatricopeptide repeat-containing protei... 55 1e-07
sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protei... 55 1e-07
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein
At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 68.2 bits (165), Expect = 1e-11
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
MKV D + W+++ GY + E A+ F ++QL PD F + A G + ++ +
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQE 7
Q H ++ G LE P I NAL+D YA CGSP++A +
Sbjct: 575 QEFHCQLLKRG-LECNPYITNALLDMYAKCGSPEDAHK 611
Score = 44.7 bits (104), Expect = 1e-04
Identities = 29/93 (31%), Positives = 42/93 (45%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
ISW+ L GY + AM+ F M GL PD A L +C + + +H+
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
I L + N+LID YA C +A++V
Sbjct: 376 TIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKV 407
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
++W+ + G K ++Q F Q+ + ++PD L AC ++ + + +H+
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 102 IISLGLLERYPVIGNALIDAYAHCG 28
I+ G LE + N LID+Y CG
Sbjct: 275 ILRYG-LEMDASLMNVLIDSYVKCG 298
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = -2
Query: 288 DGISWSALTMGYTKCK---EGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQ 118
D + ++A+ GY++ E A+ FR M+ + P + FV L+A + ++ + +
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 117 GLHSVIISLGL-LERYPVIGNALIDAYAHC 31
+H ++ GL L+ + G+ALID Y++C
Sbjct: 475 QIHGLMFKYGLNLDIFA--GSALIDVYSNC 502
Score = 37.4 bits (85), Expect = 0.024
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC---GLIKN 133
D + W+++ Y EG A+Q +M EG+ P+ + FV L AC GL+++
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing
protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79
PE=3 SV=1
Length = 504
Score = 62.8 bits (151), Expect = 5e-10
Identities = 30/95 (31%), Positives = 48/95 (50%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D + W L GY +C G ++ FR+M ++GL PD + +L AC + + + +H
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ +E +G AL+D YA CG + A EV
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Score = 32.3 bits (72), Expect = 0.76
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 279 SWSALTMGYTKCKEGPAAMQCFRQMQLE-GLMPDRVAFVCSLKAC 148
SW+AL GY AM C +++ E G+ PD V + L AC
Sbjct: 287 SWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAAC 331
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing
protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51
PE=3 SV=2
Length = 687
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/99 (34%), Positives = 54/99 (54%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M V D ISW+ + GY + +++ FR+MQ G++PD V L AC + ++ I
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ + I ++ V+GNALID Y CG ++AQ+V
Sbjct: 388 EWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D SW+ + GY + KE +++ +M+ + P V + L AC +K+ ++ + +H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCG 28
+S E + NAL++AYA CG
Sbjct: 260 E-YVSECKTEPSLRLENALVNAYAACG 285
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M D +W+A+ +G +G A++ F QMQ + PD + ++ L AC ++
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 488
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ + + S +E V ++D G +EA E+
Sbjct: 489 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Score = 30.4 bits (67), Expect = 2.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLK---------ACGLIK 136
D + W+ + G++K ++ + M EG+ PD F L ACG
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACG--- 154
Query: 135 NINIVQGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ LH ++ GL + NAL+ Y+ CG A+ V
Sbjct: 155 -----KKLHCHVVKFGLGSNL-YVQNALVKMYSLCGLMDMARGV 192
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing
protein At5g59200, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-E41 PE=3 SV=1
Length = 544
Score = 62.4 bits (150), Expect = 7e-10
Identities = 32/99 (32%), Positives = 55/99 (55%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
+K+ D + W+A+ G + KE A++ FR+MQ+E + + VC L AC + + +
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ +HS + +E +GNALI+ Y+ CG EA+ V
Sbjct: 275 RWVHS-FVENQRMELSNFVGNALINMYSRCGDINEARRV 312
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein
At4g31070, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E7 PE=2 SV=2
Length = 624
Score = 62.4 bits (150), Expect = 7e-10
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = -2
Query: 297 KVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQ 118
KV D + WS++ GY + + M QM+ EG+ + V + + AC ++
Sbjct: 325 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAS 384
Query: 117 GLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+HS I+ G + + ++GNALID YA CGS A+EV
Sbjct: 385 TVHSQILKCGFMS-HILLGNALIDMYAKCGSLSAAREV 421
Score = 37.4 bits (85), Expect = 0.024
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC-GLIKNINI 124
M+V + +SW+A+ G + + FR MQ E L P+RV + L AC L ++
Sbjct: 222 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL 281
Query: 123 VQGLHSVIISLGLLERYPVIGNALIDAYAHCGS 25
V+ +H G + A + Y CG+
Sbjct: 282 VKEIHGFSFRHG-CHADERLTAAFMTMYCRCGN 313
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein
At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/95 (30%), Positives = 56/95 (58%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D +W+A+ G A+ FR+M L G++P+ V + ++ AC +K IN +H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
S+ + +G ++ ++GN+L+D Y+ CG ++A++V
Sbjct: 376 SIAVKMGFIDDV-LVGNSLVDMYSKCGKLEDARKV 409
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/91 (28%), Positives = 46/91 (50%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M+ + +WSA+ Y++ + FR M +G++PD F L+ C ++
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCG 28
+ +HSV+I LG+ V N+++ YA CG
Sbjct: 201 KVIHSVVIKLGMSSCLRV-SNSILAVYAKCG 230
Score = 47.4 bits (111), Expect = 2e-05
Identities = 24/92 (26%), Positives = 46/92 (50%)
Frame = -2
Query: 279 SWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSVI 100
+W+ + GY + + A++ FR+MQ MP+ V + L AC + +V+ +H +
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 99 ISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ L+ + NAL D YA G + ++ +
Sbjct: 551 LRRN-LDAIHAVKNALTDTYAKSGDIEYSRTI 581
Score = 35.0 bits (79), Expect = 0.12
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNIN 127
M+ D I+W++L GY A+ F QM+ +G+ P+R + A GL+ N++
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVD 642
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing
protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86
PE=3 SV=1
Length = 689
Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
+SWSAL G+ + ++ F +M +G+ P+ F +LKACGL+ + +H
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ +G E +GN+L+D Y+ CG EA++V
Sbjct: 133 CLKIG-FEMMVEVGNSLVDMYSKCGRINEAEKV 164
Score = 38.5 bits (88), Expect = 0.011
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC---GLIK 136
M++ D ISW+ + GY K G +++ F +M + PD V ++ L AC G+IK
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV-QGLHS 106
ISWS+L +GY + E AM F+++Q D A + G+ + ++ QG
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII---GVFADFALLRQGKQM 335
Query: 105 VIISLGLLERYPV-IGNALIDAYAHCGSPQEAQE 7
+++ L + N+++D Y CG EA++
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein
At2g39620 OS=Arabidopsis thaliana GN=PCMP-E33 PE=2 SV=1
Length = 836
Score = 60.1 bits (144), Expect = 3e-09
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
+SW+ + GY + A+ FRQM++E P+ V FV ++A + + + +HS
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQE 7
+I G + PV GN+L+D YA CG + +++
Sbjct: 630 LIQCGFCSQTPV-GNSLVDMYAKCGMIESSEK 660
Score = 42.7 bits (99), Expect = 6e-04
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLE-GLMPDRVAFVCSLKACGLIKNINIVQGLHS 106
+ W+++ GYT+ A+ F M E G+ PD+ +F +LKAC + +H
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 105 VIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+I +G LE IG AL++ Y A++V
Sbjct: 125 LIAEMG-LESDVYIGTALVEMYCKARDLVSARQV 157
Score = 40.4 bits (93), Expect = 0.003
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
+ + D ++++AL GYT+ + A ++ M+L G+ PD V L+ C +
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHC 31
++ II G + + +ALI+ + C
Sbjct: 522 SCVYGQIIKHG-FDSECHVAHALINMFTKC 550
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC 148
+SW+ + Y A+ F MQ L PD V+F+ L AC
Sbjct: 671 VSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein
At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 59.7 bits (143), Expect = 4e-09
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D + W L GY +C G ++ F++M + G+ PD + +L AC + + + +H
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ +E +G AL+D YA CG + A EV
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E28 PE=2 SV=1
Length = 681
Score = 59.3 bits (142), Expect = 6e-09
Identities = 29/97 (29%), Positives = 53/97 (54%)
Frame = -2
Query: 294 VHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQG 115
V D +SW+ L GY K E A+ ++ M+ EG+ PD V + + +C ++ ++N +
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 114 LHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+ + GL P++ NAL+D ++ CG EA+ +
Sbjct: 279 FYEYVKENGLRMTIPLV-NALMDMFSKCGDIHEARRI 314
Score = 54.3 bits (129), Expect = 2e-07
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M+ D + W+A+ G + K G A+ F++MQ PD + + L AC + +++
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+H I L +G +L+D YA CG+ EA V
Sbjct: 409 IWIHRYIEKYS-LSLNVALGTSLVDMYAKCGNISEALSV 446
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q5NAR1 |
| Definition |
tr|Q5NAR1|Q5NAR1_ORYSJ Pentatricopeptide (PPR) repeat-containing protein-like OS=Oryza sativa subsp. japonica |
| Align length |
93 |
| Score (bit) |
71.6 |
| E-value |
2.0e-11 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917894|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_A02.
(301 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q5NAR1|Q5NAR1_ORYSJ Pentatricopeptide (PPR) repeat-containing... 72 2e-11
tr|A2WN30|A2WN30_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11
tr|Q8S7U9|Q8S7U9_ORYSJ Putative pentatricopeptide repeat contain... 71 2e-11
tr|Q10R82|Q10R82_ORYSJ Os03g0168500 protein OS=Oryza sativa subs... 71 2e-11
tr|B8APA5|B8APA5_ORYSI Putative uncharacterized protein OS=Oryza... 71 2e-11
tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genom... 70 7e-11
tr|A7P0D1|A7P0D1_VITVI Chromosome chr6 scaffold_3, whole genome ... 68 2e-10
tr|A5BJ29|A5BJ29_VITVI Putative uncharacterized protein OS=Vitis... 68 2e-10
tr|Q6ZH58|Q6ZH58_ORYSJ cDNA clone:J023139G21, full insert sequen... 68 3e-10
tr|Q6ZH57|Q6ZH57_ORYSJ Pentatricopeptide (PPR) repeat-containing... 68 3e-10
tr|Q0DX78|Q0DX78_ORYSJ Os02g0769900 protein (Fragment) OS=Oryza ... 68 3e-10
tr|A2XA19|A2XA19_ORYSI Putative uncharacterized protein OS=Oryza... 68 3e-10
tr|A5C1A7|A5C1A7_VITVI Putative uncharacterized protein OS=Vitis... 66 7e-10
tr|A7NV52|A7NV52_VITVI Chromosome chr18 scaffold_1, whole genome... 66 1e-09
tr|A2ZRG3|A2ZRG3_ORYSJ Putative uncharacterized protein OS=Oryza... 66 1e-09
tr|Q84M45|Q84M45_ORYSJ Putative pentatricopeptide repeat contain... 65 1e-09
tr|Q10BR5|Q10BR5_ORYSJ Calreticulin family protein, expressed (P... 65 1e-09
tr|B8B274|B8B274_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09
tr|B8ALT6|B8ALT6_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09
tr|A7PXL1|A7PXL1_VITVI Chromosome chr12 scaffold_36, whole genom... 65 1e-09
tr|B8A020|B8A020_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09
tr|Q6YUT6|Q6YUT6_ORYSJ Putative pentatricopeptide (PPR) repeat-c... 64 4e-09
tr|Q2QYL5|Q2QYL5_ORYSJ Pentatricopeptide, putative, expressed (P... 64 4e-09
tr|Q0IQL3|Q0IQL3_ORYSJ Os12g0114400 protein (Fragment) OS=Oryza ... 64 4e-09
tr|B8BNW7|B8BNW7_ORYSI Putative uncharacterized protein OS=Oryza... 64 4e-09
tr|A3A409|A3A409_ORYSJ Putative uncharacterized protein OS=Oryza... 64 4e-09
tr|A7QR26|A7QR26_VITVI Chromosome undetermined scaffold_147, who... 64 5e-09
tr|A7QJF8|A7QJF8_VITVI Chromosome chr8 scaffold_106, whole genom... 64 5e-09
tr|A5ANH9|A5ANH9_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09
tr|A7R0D1|A7R0D1_VITVI Chromosome undetermined scaffold_304, who... 63 6e-09
>tr|Q5NAR1|Q5NAR1_ORYSJ Pentatricopeptide (PPR) repeat-containing
protein-like OS=Oryza sativa subsp. japonica
GN=P0699D11.9 PE=4 SV=1
Length = 503
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/93 (36%), Positives = 59/93 (63%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
+SW+ + Y + K+ A++ FR+MQ+EG+ PD VA + L ACG + +++ + +H
Sbjct: 174 VSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRF 233
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
++ GL + P++ NA+ID Y CGS ++A EV
Sbjct: 234 VLRRGLCQEIPLM-NAIIDMYVKCGSVKKALEV 265
Score = 33.5 bits (75), Expect = 5.4
Identities = 18/91 (19%), Positives = 41/91 (45%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
++W+ + G+ G A++ FR+M+ E + P+ + F+ L C + ++ +
Sbjct: 275 VTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 334
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQ 10
++S ++ +ID G EA+
Sbjct: 335 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 365
>tr|A2WN30|A2WN30_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01257 PE=4 SV=1
Length = 499
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/93 (36%), Positives = 59/93 (63%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
+SW+ + Y + K+ A++ FR+MQ+EG+ PD VA + L ACG + +++ + +H
Sbjct: 170 VSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRF 229
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
++ GL + P++ NA+ID Y CGS ++A EV
Sbjct: 230 VLRRGLCQEIPLM-NAIIDMYVKCGSVKKALEV 261
Score = 34.3 bits (77), Expect = 3.1
Identities = 18/91 (19%), Positives = 41/91 (45%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
++W+ + G+ G A++ FR+M+ E + P+ + F+ L C + ++ +
Sbjct: 271 VTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 330
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQ 10
++S ++ +ID G EA+
Sbjct: 331 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 361
>tr|Q8S7U9|Q8S7U9_ORYSJ Putative pentatricopeptide repeat containing
protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0091P11.28 PE=4 SV=1
Length = 545
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D +SW+ + GY +C A++ F QMQ G PD V + L AC ++++ Q LH
Sbjct: 239 DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLH 298
Query: 108 SVIISLGLLERYPVI-GNALIDAYAHCGSPQEAQEV 4
S + + +PV+ GNALID YA CGS + A EV
Sbjct: 299 SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEV 334
>tr|Q10R82|Q10R82_ORYSJ Os03g0168500 protein OS=Oryza sativa subsp.
japonica GN=Os03g0168500 PE=4 SV=1
Length = 823
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D +SW+ + GY +C A++ F QMQ G PD V + L AC ++++ Q LH
Sbjct: 209 DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLH 268
Query: 108 SVIISLGLLERYPVI-GNALIDAYAHCGSPQEAQEV 4
S + + +PV+ GNALID YA CGS + A EV
Sbjct: 269 SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEV 304
>tr|B8APA5|B8APA5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10176 PE=4 SV=1
Length = 523
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D +SW+ + GY +C A++ F QMQ G PD V + L AC ++++ Q LH
Sbjct: 209 DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLH 268
Query: 108 SVIISLGLLERYPVI-GNALIDAYAHCGSPQEAQEV 4
S + + +PV+ GNALID YA CGS + A EV
Sbjct: 269 SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEV 304
>tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020997001
PE=4 SV=1
Length = 515
Score = 69.7 bits (169), Expect = 7e-11
Identities = 34/95 (35%), Positives = 53/95 (55%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D ++W+A+ GY C A++ F +M+ G +PD V + L AC + +++ Q +H
Sbjct: 205 DVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIH 264
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
I +G + ++GNALID YA CGS A EV
Sbjct: 265 CCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEV 299
Score = 39.3 bits (90), Expect = 0.098
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D W+ + G + A+ + QM+ + PD+ F LKAC + + + G+H
Sbjct: 42 DTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVH 101
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCG 28
+ LG E + N LI +A+CG
Sbjct: 102 GRVFRLG-FESNTFVRNTLIYFHANCG 127
Score = 35.8 bits (81), Expect = 1.1
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -2
Query: 288 DGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLH 109
D ++WSALT GY + E A Q F +M ++ L+ V K + + +
Sbjct: 143 DVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVP 202
Query: 108 SVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+R V NA+I Y CGS Q+A E+
Sbjct: 203 ---------KRDVVTWNAMIAGYVLCGSNQQALEM 228
>tr|A7P0D1|A7P0D1_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024861001
PE=4 SV=1
Length = 576
Score = 68.2 bits (165), Expect = 2e-10
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
ISW+A+ GY + A+ FR+MQLE + PD +A + +L AC + + + + +H+
Sbjct: 237 ISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNY 296
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
I GL + P + NALID YA CG ++A EV
Sbjct: 297 IDKHGLSKIVP-LNNALIDMYAKCGKIEKALEV 328
>tr|A5BJ29|A5BJ29_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041201 PE=4 SV=1
Length = 576
Score = 68.2 bits (165), Expect = 2e-10
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = -2
Query: 282 ISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIVQGLHSV 103
ISW+A+ GY + A+ FR+MQLE + PD +A + +L AC + + + + +H+
Sbjct: 237 ISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNY 296
Query: 102 IISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
I GL + P + NALID YA CG ++A EV
Sbjct: 297 IDKHGLSKIVP-LNNALIDMYAKCGKIEKALEV 328
>tr|Q6ZH58|Q6ZH58_ORYSJ cDNA clone:J023139G21, full insert sequence
OS=Oryza sativa subsp. japonica GN=OJ1079_F11.25-1 PE=2
SV=1
Length = 527
Score = 67.8 bits (164), Expect = 3e-10
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M D +SW+AL G K A+ CFR M L+G+ PD V + + AC + + +
Sbjct: 196 MPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG 255
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+H +++ G LER I N+LID YA CG + A++V
Sbjct: 256 MWVHRLVVRQG-LERNVRIANSLIDMYARCGQVELARQV 293
Score = 33.9 bits (76), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC 148
M+ +SW+++ +G+ A++ F M+ EG PD V F L AC
Sbjct: 297 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTAC 347
>tr|Q6ZH57|Q6ZH57_ORYSJ Pentatricopeptide (PPR) repeat-containing
protein-like OS=Oryza sativa subsp. japonica
GN=OJ1079_F11.25-2 PE=4 SV=1
Length = 438
Score = 67.8 bits (164), Expect = 3e-10
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKACGLIKNINIV 121
M D +SW+AL G K A+ CFR M L+G+ PD V + + AC + + +
Sbjct: 107 MPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG 166
Query: 120 QGLHSVIISLGLLERYPVIGNALIDAYAHCGSPQEAQEV 4
+H +++ G LER I N+LID YA CG + A++V
Sbjct: 167 MWVHRLVVRQG-LERNVRIANSLIDMYARCGQVELARQV 204
Score = 33.9 bits (76), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 300 MKVHDGISWSALTMGYTKCKEGPAAMQCFRQMQLEGLMPDRVAFVCSLKAC 148
M+ +SW+++ +G+ A++ F M+ EG PD V F L AC
Sbjct: 208 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTAC 258
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