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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917895
Clone id YMU001_000107_A03
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGAAGAATTCGCGGCCGCAGGAATTTTTTTATCCACGGGGGACATGAAAGTGATCGGT
CTCCACTGTCGGAGGGACGATGTATCTCCATCTTTCGGTACAAGAGAAATAAGTCCTGAA
CACATAGAGGCAGGCGTTTCTCCTATGTCAAATATATGTTGTAAACCTAAAAGCATAGTG
GGGCTTAGAGCATCCAGAACTGCAAAAAGAATTTGTCTAGTCAGCTTATCCTCTAAGAGG
CACCATCGAGGTCAGTAACGTATGGCACATAACCTCTGTAACCACTGGCTGCACATGAGA
CCAAGCCTCTTCTCCGGCAGGCAAAGACTTGCGTCCCTTTCGGTATTTCTTTATTATTGC
TCGCCGCAACAATACAACTCCTGAGGGTCCTCTGCTCTTAGACTCTGCATCTTGATGCTC
TGCAGAGTGAGGCCCCAGGGACTCTTATAAATAGTAAAAGGGTTGCCCAAAAGCACTTCA
CCCAAAAGCAC
■■Homology search results ■■ -
sp_hit_id P14381
Definition sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis
Align length 63
Score (bit) 42.7
E-value 0.0007
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917895|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_A03.
         (459 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot...    43   7e-04
sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from typ...    33   0.59 
sp|Q9UKJ5|CHIC2_HUMAN Cysteine-rich hydrophobic domain 2 protein...    31   2.3  
sp|Q9D9G3|CHIC2_MOUSE Cysteine-rich hydrophobic domain 2 protein...    30   5.0  
sp|P31674|RS15_ORYSJ 40S ribosomal protein S15 OS=Oryza sativa s...    30   6.6  
sp|Q9JIB0|MOG1_MOUSE Ran guanine nucleotide release factor OS=Mu...    30   6.6  

>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
           OS=Xenopus laevis PE=4 SV=1
          Length = 1308

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDGDTSSLRQWRPIT 19
           D LT +      D L P     L   F  GE P S    ++SL+PK GD   ++ WRP++
Sbjct: 470 DGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVS 529

Query: 18  FMS 10
            +S
Sbjct: 530 LLS 532


>sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Fragment) OS=Popillia
           japonica PE=4 SV=1
          Length = 711

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 111 GETPASMCSGLISLVPKDGDTSSLRQWRPITFMS 10
           G  P    +   +L+PKDGD  +   WRPIT  S
Sbjct: 50  GHVPTPWTAMRTTLIPKDGDLENPSNWRPITIAS 83


>sp|Q9UKJ5|CHIC2_HUMAN Cysteine-rich hydrophobic domain 2 protein
           OS=Homo sapiens GN=CHIC2 PE=1 SV=1
          Length = 165

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 17/101 (16%)
 Frame = +2

Query: 5   TGDMKVIGLHCRRDDVSPSFGTREISPEHIEAGVSPMSNICCKPKSIVGLRASRTAKRIC 184
           +G + V GL  + +   PS  T +++PE  +A ++ + N C K    V +R        C
Sbjct: 35  SGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRV-NSCLKKNLPVNVRWLLCGCLCC 93

Query: 185 LVSLS---------SKRHHRG--------Q*RMAHNLCNHW 256
             +L          SKR  R           R+ H LC HW
Sbjct: 94  CCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHKLCLHW 134


>sp|Q9D9G3|CHIC2_MOUSE Cysteine-rich hydrophobic domain 2 protein
           OS=Mus musculus GN=Chic2 PE=2 SV=1
          Length = 165

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 17/101 (16%)
 Frame = +2

Query: 5   TGDMKVIGLHCRRDDVSPSFGTREISPEHIEAGVSPMSNICCKPKSIVGLRASRTAKRIC 184
           +G + V GL  + +   PS  T +++PE  +A ++ + N C +    V +R        C
Sbjct: 35  SGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRV-NSCLRKNLPVNVRWLLCGCLCC 93

Query: 185 LVSLS---------SKRHHRG--------Q*RMAHNLCNHW 256
             +L          SKR  R           R+ H LC HW
Sbjct: 94  CCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHKLCLHW 134


>sp|P31674|RS15_ORYSJ 40S ribosomal protein S15 OS=Oryza sativa
           subsp. japonica GN=RPS15 PE=2 SV=2
          Length = 154

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -3

Query: 376 AESKSRGPSGVVLLRRAIIKKYRKGRKSLPAGEEAWSHVQPVVTEVMCHTLLTSMV 209
           A ++ R   G+     A+IKK RK +K  PAGE+     +PV T +    ++  M+
Sbjct: 48  ARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKP----EPVRTHLRNMIIVPEMI 99


>sp|Q9JIB0|MOG1_MOUSE Ran guanine nucleotide release factor OS=Mus
           musculus GN=Rangrf PE=1 SV=1
          Length = 185

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 104 RLPLCVQDLFLLYRKMEIHRPSDSGDRSLSCPPW 3
           RLP    DL L + +   H  S  G  +LSCPPW
Sbjct: 130 RLPQYQTDLLLTFNQPPCHSRS-LGPENLSCPPW 162
tr_hit_id A4R1V8
Definition tr|A4R1V8|A4R1V8_MAGGR Putative uncharacterized protein OS=Magnaporthe grisea
Align length 65
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917895|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_A03.
         (459 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4R1V8|A4R1V8_MAGGR Putative uncharacterized protein OS=Magna...    39   0.17 
tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridi...    38   0.29 
tr|Q76B34|Q76B34_FUGRU Reverse transcriptase OS=Fugu rubripes GN...    37   0.37 
tr|Q9M1N9|Q9M1N9_ARATH Putative uncharacterized protein T18B22.5...    37   0.49 
tr|Q0MXP7|Q0MXP7_9NEOP Reverse transcriptase (Fragment) OS=Macul...    37   0.49 
tr|O13348|O13348_MAGGR Reverse transcriptase OS=Magnaporthe gris...    37   0.64 
tr|A4RPQ4|A4RPQ4_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4RNI6|A4RNI6_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4RJ68|A4RJ68_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4RIN7|A4RIN7_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4RCR4|A4RCR4_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4RAM6|A4RAM6_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R9J5|A4R9J5_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R6P6|A4R6P6_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R6L8|A4R6L8_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R441|A4R441_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R424|A4R424_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R3U5|A4R3U5_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R3F0|A4R3F0_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R2Z8|A4R2Z8_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4R099|A4R099_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QZX1|A4QZX1_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QZX0|A4QZX0_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QZ62|A4QZ62_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QYW5|A4QYW5_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QY06|A4QY06_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QWV4|A4QWV4_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QVQ1|A4QVQ1_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QUR1|A4QUR1_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 
tr|A4QSL8|A4QSL8_MAGGR Putative uncharacterized protein OS=Magna...    37   0.64 

>tr|A4R1V8|A4R1V8_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_06813 PE=4 SV=1
          Length = 725

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      I+++PK G  D SS+R WRP
Sbjct: 87  DGITVRLLKAGWVSLAEPVRRLYQRCLELGHFPAPWKKAEIAMLPKTGKKDRSSVRSWRP 146

Query: 24  ITFMS 10
           IT +S
Sbjct: 147 ITLLS 151


>tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridis
           GN=ORF2 PE=4 SV=1
          Length = 1318

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -1

Query: 192 LTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDGDTSSLRQWRPITFM 13
           LT +   A  D ++P +L         G  P S    +++L+PK G+   +R WRP++ +
Sbjct: 496 LTVEFYKAYWDIVAPDLLEVFNESLSSGSLPVSCRRAVMALLPKKGNLQDIRNWRPVSLL 555


>tr|Q76B34|Q76B34_FUGRU Reverse transcriptase OS=Fugu rubripes
           GN=ORF2 PE=4 SV=1
          Length = 1154

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -1

Query: 201 EDKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDGDTSSLRQWRPI 22
           +D L  +      D L+P ++        +   P S   G+++L+ K  D + L+ WRPI
Sbjct: 461 QDGLPVEFYLTFWDLLAPDLITVFMEFEGLDRLPDSFRVGIVTLLHKQKDKTELKNWRPI 520

Query: 21  TFMS 10
           T ++
Sbjct: 521 TLLN 524


>tr|Q9M1N9|Q9M1N9_ARATH Putative uncharacterized protein T18B22.50
           OS=Arabidopsis thaliana GN=T18B22.50 PE=4 SV=1
          Length = 762

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDGDTSSLRQWRPIT 19
           D  T +      + L P  +L +Q  F +G  P  + S +++L+PK  ++  ++ +RPI+
Sbjct: 27  DGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPIS 86


>tr|Q0MXP7|Q0MXP7_9NEOP Reverse transcriptase (Fragment)
           OS=Maculinea teleius GN=RT PE=4 SV=1
          Length = 169

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 156 LSPTMLLGLQHIFDIGETPASMCSGLISLVPKDGDTSSLRQWRPITFMS 10
           L+P +    +H +D+G  P S  + L+  +PK GD S    +RPI   S
Sbjct: 2   LAPVLTRLFRHSYDLGVVPHSWKTALVHPIPKKGDRSDPSNYRPIAITS 50


>tr|O13348|O13348_MAGGR Reverse transcriptase OS=Magnaporthe grisea
           PE=4 SV=1
          Length = 1295

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      ++++PK G  D SS+R WRP
Sbjct: 454 DGITVRLLKAGWASLAEPVRRLYQRCLELGHFPAPWKKAEVAMLPKTGKKDRSSVRSWRP 513

Query: 24  ITFMS 10
           I  +S
Sbjct: 514 IALLS 518


>tr|A4RPQ4|A4RPQ4_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_13128 PE=4 SV=1
          Length = 329

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      ++++PK G  D SS+R WRP
Sbjct: 191 DGITVRLLKAGWASLAEPVRRLYQRCLELGHFPAPWKKAEVAMLPKTGKKDRSSVRSWRP 250

Query: 24  ITFMS 10
           I  +S
Sbjct: 251 IALLS 255


>tr|A4RNI6|A4RNI6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_08444 PE=4 SV=1
          Length = 1295

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      ++++PK G  D SS+R WRP
Sbjct: 454 DGMTVRLLKAGWASLAEPVRRLYQRCLELGHFPAPWKKAEVAMLPKTGKKDRSSVRSWRP 513

Query: 24  ITFMS 10
           I  +S
Sbjct: 514 IALLS 518


>tr|A4RJ68|A4RJ68_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_12486 PE=4 SV=1
          Length = 321

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      ++++PK G  D SS+R WRP
Sbjct: 180 DGITVRLLKAGWASLAEPVRRLYQRCLELGHFPAPWKKAEVAMLPKTGKKDRSSVRSWRP 239

Query: 24  ITFMS 10
           I  +S
Sbjct: 240 IALLS 244


>tr|A4RIN7|A4RIN7_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_12437 PE=4 SV=1
          Length = 1295

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 198 DKLTRQILFAVLDALSPTMLLGLQHIFDIGETPASMCSGLISLVPKDG--DTSSLRQWRP 25
           D +T ++L A   +L+  +    Q   ++G  PA      ++++PK G  D SS+R WRP
Sbjct: 454 DGMTVRLLKAGWASLAEPVRRLYQRCLELGHFPAPWKKAEVAMLPKTGKKDRSSVRSWRP 513

Query: 24  ITFMS 10
           I  +S
Sbjct: 514 IALLS 518