BP917905 |
Clone id |
YMU001_000107_B05 |
Library |
YMU01 |
Length |
530 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_B05. |
Accession |
BP917905 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL43Contig1 |
Sequence |
AGCCAATACCTTCTCCACAGAACATTGGTGCGCATGGGAATGGTGCCCCACCGCTGCCTG GTAGTGGACCTGGACGCTTTCAGAACTTTCCAAGAGTGCATTCTGCTCCTAACATGTCTG GAAGAGTTTTAAAAGGGTGTTCAGTTAAAGGTGGCTCAACAGGGAGCAACTGGAGGGCTA AGGATGTCTCAAAAGGACAGAATAAGGGTGATGGGCCTGTCAACAGTGCTCTTCCAGAGG CCTGTGGTGACTCTTTTCTAAAACCATCAGTAATAGAATCCAAAGTGCTCCCTGTTCAGG AAGGTGGAGAGGTACGTAATCACTCATCGCTCATTCCAGAGCAGCTATGCAGCTCAGTCA ACAGGAGTGATTACAACAAGGATGACTTTCAAGTATCGTATGAGGCAGCCAAGTTTTTCA TAATTAAGTCGTATAGCGAAGATGATGTGCACAAAAGTATTAAATACAGTGTGTGGTCAA GTACGCCAAATGGAAACAAACGATTGGACGAAGCTTACAGGAAGGCTCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4R5D9 |
Definition |
sp|Q4R5D9|YTHD2_MACFA YTH domain family protein 2 OS=Macaca fascicularis |
Align length |
171 |
Score (bit) |
75.5 |
E-value |
1.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q56XH8 |
Definition |
tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g09810 OS=Arabidopsis thaliana |
Align length |
173 |
Score (bit) |
96.3 |
E-value |
9.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917905|Adiantum capillus-veneris mRNA, clone: YMU001_000107_B05. (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g0981... 96 9e-19 tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea m... 96 9e-19 tr|A1L4X2|A1L4X2_ARATH At1g09810 OS=Arabidopsis thaliana PE=2 SV=1 96 9e-19 tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana ... 96 1e-18 tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thalian... 96 1e-18 tr|O04503|O04503_ARATH F21M12.20 protein OS=Arabidopsis thaliana... 96 1e-18 tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome ... 94 4e-18 tr|A2Q5N8|A2Q5N8_MEDTR YT521-B-like protein OS=Medicago truncatu... 94 6e-18 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 93 7e-18 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 93 7e-18 tr|Q8H8C1|Q8H8C1_ORYSJ Putative RNA-binding protein (Putative un... 92 1e-17 tr|Q10RI5|Q10RI5_ORYSJ YT521-B-like family protein, expressed OS... 92 1e-17 tr|Q10RI4|Q10RI4_ORYSJ Os03g0158500 protein OS=Oryza sativa subs... 92 1e-17 tr|Q10RI3|Q10RI3_ORYSJ YT521-B-like family protein, expressed OS... 92 1e-17 tr|Q10RI2|Q10RI2_ORYSJ YT521-B-like family protein, expressed OS... 92 1e-17 tr|B8ANU7|B8ANU7_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|Q9LJE5|Q9LJE5_ARATH Gb|AAD10646.1 (AT3g13460/MRP15_10) OS=Ara... 92 2e-17 tr|Q8H0S7|Q8H0S7_ARATH Putative uncharacterized protein At3g1346... 92 2e-17 tr|Q3MK93|Q3MK93_ARATH Putative uncharacterized protein OS=Arabi... 92 2e-17 tr|Q3EB70|Q3EB70_ARATH Uncharacterized protein At3g13460.2 OS=Ar... 92 2e-17 tr|Q2V3W3|Q2V3W3_ARATH Uncharacterized protein At3g13460.3 OS=Ar... 92 2e-17 tr|Q2V3W2|Q2V3W2_ARATH Uncharacterized protein At3g13460.4 OS=Ar... 92 2e-17 tr|B4FF64|B4FF64_MAIZE Putative uncharacterized protein OS=Zea m... 92 2e-17 tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative u... 91 4e-17 tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thalian... 91 4e-17 tr|A9PJU2|A9PJU2_POPJC Putative uncharacterized protein OS=Popul... 90 6e-17 tr|Q8W311|Q8W311_ORYSA Putative RNA-binding protein OS=Oryza sat... 90 8e-17 tr|Q10CW7|Q10CW7_ORYSJ Os03g0748000 protein OS=Oryza sativa subs... 90 8e-17 tr|B8AJV8|B8AJV8_ORYSI Putative uncharacterized protein OS=Oryza... 90 8e-17 tr|A5BWE9|A5BWE9_VITVI Putative uncharacterized protein OS=Vitis... 90 8e-17
>tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g09810 OS=Arabidopsis thaliana GN=At1g09810 PE=2 SV=1 Length = 470
Score = 96.3 bits (238), Expect = 9e-19 Identities = 65/173 (37%), Positives = 84/173 (48%), Gaps = 1/173 (0%) Frame = +3
Query: 15 PQNIGAHGNGAPPLPGSGPGRFQNFPRVH-SAPNMSGRVLKGCSVKGGSTGSNWRAKDVS 191 P N AH P G+F F S SG + G S W +D + Sbjct: 117 PPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYI------NGNSNNGFWDQRDHN 170
Query: 192 KGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSD 371 K + +G + + CG +K P E ++ ++S ++ R Sbjct: 171 KKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQNNSF-----ALALRREM 218
Query: 372 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQ 530 YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+LD A+R A+ Sbjct: 219 YNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLDAAFRDAE 271
>tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 338
Score = 96.3 bits (238), Expect = 9e-19 Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Frame = +3
Query: 96 VHSAPNMSGRVLKGCSVKGGSTGSNWRAKDVSKGQNKGDGPVNSALPEACGDSFLKPSVI 275 +HS V + + +G +W + + K ++K +G +S E K S+ Sbjct: 1 MHSNNQAKSSVYQSKGINLKESGRSWHSSEKLKARSKLNGHGDSESNENNHTDNSKYSLS 60
Query: 276 -ESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVH 452 +S V+ + G+ ++ IP + + ++ YN DF YE A FF+IKSYSEDD+H Sbjct: 61 SQSDVVGLSSVGDA---NASIPSPVV--IRKTAYNLSDFVTKYEQALFFVIKSYSEDDIH 115
Query: 453 KSIKYSVWSSTPNGNKRLDEAYRKAQ 530 KSIKY+VW+STPNGNKRLD AYR AQ Sbjct: 116 KSIKYNVWASTPNGNKRLDNAYRLAQ 141
>tr|A1L4X2|A1L4X2_ARATH At1g09810 OS=Arabidopsis thaliana PE=2 SV=1 Length = 428
Score = 96.3 bits (238), Expect = 9e-19 Identities = 65/173 (37%), Positives = 84/173 (48%), Gaps = 1/173 (0%) Frame = +3
Query: 15 PQNIGAHGNGAPPLPGSGPGRFQNFPRVH-SAPNMSGRVLKGCSVKGGSTGSNWRAKDVS 191 P N AH P G+F F S SG + G S W +D + Sbjct: 75 PPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYI------NGNSNNGFWDQRDHN 128
Query: 192 KGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSD 371 K + +G + + CG +K P E ++ ++S ++ R Sbjct: 129 KKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQNNSF-----ALALRREM 176
Query: 372 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQ 530 YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+LD A+R A+ Sbjct: 177 YNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLDAAFRDAE 229
>tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana GN=T5A14.10 PE=4 SV=1 Length = 580
Score = 95.5 bits (236), Expect = 1e-18 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +3
Query: 348 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKA 527 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD AY++A Sbjct: 381 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEA 440
Query: 528 Q 530 Q Sbjct: 441 Q 441
>tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thaliana GN=At1g55500 PE=2 SV=1 Length = 549
Score = 95.5 bits (236), Expect = 1e-18 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +3
Query: 348 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKA 527 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD AY++A Sbjct: 338 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEA 397
Query: 528 Q 530 Q Sbjct: 398 Q 398
>tr|O04503|O04503_ARATH F21M12.20 protein OS=Arabidopsis thaliana GN=F21M12.20 PE=4 SV=1 Length = 425
Score = 95.5 bits (236), Expect = 1e-18 Identities = 54/129 (41%), Positives = 72/129 (55%) Frame = +3
Query: 144 VKGGSTGSNWRAKDVSKGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNH 323 + G S W +D +K + +G + + CG +K P E ++ + Sbjct: 94 INGNSNNGFWDQRDHNKKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQN 146
Query: 324 SSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKR 503 +S ++ R YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+ Sbjct: 147 NSF-----ALALRREMYNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKK 201
Query: 504 LDEAYRKAQ 530 LD A+R A+ Sbjct: 202 LDAAFRDAE 210
>tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024843001 PE=4 SV=1 Length = 320
Score = 94.0 bits (232), Expect = 4e-18 Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +3
Query: 261 KPSVIESKVLPVQEGGE-VRNHSSLIPEQLCSSV--NRSDYNKDDFQVSYEAAKFFIIKS 431 K S + + PV G+ V+++ S E+ +SV +R YN DF V + AKFFIIKS Sbjct: 14 KSSKNQKGLAPVTAKGQNVQSNGSNDEEKDRTSVFPDRDQYNHADFPVEHTEAKFFIIKS 73
Query: 432 YSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQ 530 YSEDDVHKSIKY+VW+STPNGNK+LD AYR+AQ Sbjct: 74 YSEDDVHKSIKYNVWASTPNGNKKLDAAYREAQ 106
>tr|A2Q5N8|A2Q5N8_MEDTR YT521-B-like protein OS=Medicago truncatula GN=MtrDRAFT_AC167711g26v2 PE=4 SV=1 Length = 662
Score = 93.6 bits (231), Expect = 6e-18 Identities = 71/183 (38%), Positives = 94/183 (51%), Gaps = 14/183 (7%) Frame = +3
Query: 21 NIGAHGNGAPPLPGSGPGRFQN---FPRVHSAPNMSGRVLKGCSVKGGSTGS---NWRAK 182 N H +G LPG G + + F + S+ + R G S G TGS +RA Sbjct: 299 NGSRHPSGMELLPGFMNGMYPSNNLFSQYGSSFRANSRY--GSSAYGSRTGSFDNKYRAT 356
Query: 183 D----VSKGQNKGDG--PVNSALPEACGDSFLKPSVIESKVLPVQEGGE--VRNHSSLIP 338 + + GDG +N P A S K V + +G V++ ++P Sbjct: 357 GNGYVANDSRRNGDGFSELNKG-PRAAKSSDNKSVKSPEPVTLLLKGQNLPVKSDDEVVP 415
Query: 339 EQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAY 518 L N+ YN +D +Y AKFFIIKSYSEDDVHKSIKYSVW+STPNGNK+LD AY Sbjct: 416 LVL----NKEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAY 471
Query: 519 RKA 527 ++A Sbjct: 472 QEA 474
>tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019682001 PE=4 SV=1 Length = 416
Score = 93.2 bits (230), Expect = 7e-18 Identities = 42/53 (79%), Positives = 46/53 (86%) Frame = +3
Query: 372 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQ 530 YNKDDF V Y AKFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY AQ Sbjct: 65 YNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQ 117
>tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038412 PE=4 SV=1 Length = 1960
Score = 93.2 bits (230), Expect = 7e-18 Identities = 42/53 (79%), Positives = 46/53 (86%) Frame = +3
Query: 372 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQ 530 YNKDDF V Y AKFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY AQ Sbjct: 373 YNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQ 425
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