| BP917908 |
| Clone id |
YMU001_000107_B08 |
| Library |
YMU01 |
| Length |
127 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_B08. |
| Accession |
BP917908 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TCGAGATGTTATCACATGGAATTCTCTGATTACAGGATACGTGAATCATGAGAAGAGCAA
AGATGCACTGGAATTGTATGATAAGATGCAAGCTGAAGGGGTTACTCCTGATGCTCTCAC
TTTCTCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9SVA5 |
| Definition |
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana |
| Align length |
41 |
| Score (bit) |
52.4 |
| E-value |
7.0e-07 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917908|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_B08.
(127 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei... 52 7e-07
sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protei... 49 1e-05
sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protei... 48 1e-05
sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protei... 48 2e-05
sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protei... 48 2e-05
sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protei... 47 2e-05
sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protei... 47 2e-05
sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protei... 47 3e-05
sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protei... 47 3e-05
sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protei... 47 3e-05
sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protei... 47 4e-05
sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protei... 47 4e-05
sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protei... 47 4e-05
sp|Q9FI49|PP428_ARATH Pentatricopeptide repeat-containing protei... 46 5e-05
sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protei... 46 5e-05
sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protei... 46 7e-05
sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protei... 45 9e-05
sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protei... 45 9e-05
sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containi... 45 1e-04
sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containi... 45 1e-04
sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
sp|Q9ZUT4|PP192_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein
At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 52.4 bits (124), Expect = 7e-07
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV+ WNS+I+ Y NH + K AL++ +KM +EG+ P+ +TF
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Score = 40.4 bits (93), Expect = 0.003
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+D++ WNS+ GYV ++++AL L+ ++Q PD TF+
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Score = 36.2 bits (82), Expect = 0.052
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPD 112
+++I+W +L++GY + K+A+EL+ M G+ PD
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Score = 30.8 bits (68), Expect = 2.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+ +TW ++I+G V +S +L+L+ ++ + V PD S
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein
At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 48.5 bits (114), Expect = 1e-05
Identities = 17/41 (41%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD +TWN++I GY +H K ++A++L+++M E + P+ +TF
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Score = 46.2 bits (108), Expect = 5e-05
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +2
Query: 11 ITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
++WNS+I+GYV E+S+DA L+ +M G+TPD T++
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Score = 41.2 bits (95), Expect = 0.002
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RDV++WNS+++GY+ + +S ++E++ M EG+ D TF+
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Score = 32.7 bits (73), Expect = 0.58
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD ++WN++I + + K + L L+ M + PD TF
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein
At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 48.1 bits (113), Expect = 1e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV+TWNS+I GY H +A+ + KM A GV P+A+TF
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
RD+++WN +I + + AL +Y +M EGV D+ T
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYT 210
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein
At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 47.8 bits (112), Expect = 2e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+D+ITWNSLI GYV H AL L+++M+ +G+TP+ T S
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 629
Score = 43.5 bits (101), Expect = 3e-04
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RDVI WNS++ Y + K ++A+EL +M+ EG++P +T++
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Score = 40.8 bits (94), Expect = 0.002
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
R+ TWN +I GY+ + K +ALEL+ KMQ P+++T
Sbjct: 487 RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Score = 38.9 bits (89), Expect = 0.008
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+DV TWNS+ITGY A EL+ +MQ + P+ +T++
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Score = 37.0 bits (84), Expect = 0.031
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 5 DVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
DV TW ++I+G +++ AL+++ KM GV P+A+T
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Score = 36.6 bits (83), Expect = 0.040
Identities = 11/32 (34%), Positives = 25/32 (78%)
Frame = +2
Query: 5 DVITWNSLITGYVNHEKSKDALELYDKMQAEG 100
++ITWN++I+GY+ + +A++L+ +M+ +G
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 36.2 bits (82), Expect = 0.052
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 8 VITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
++TWN LI GY K A++L KM+ G+T D T++
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Score = 32.0 bits (71), Expect = 0.99
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
R++ TW+++I Y + ++ +L+ M +GV PD F
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLF 184
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E15 PE=2 SV=1
Length = 627
Score = 47.8 bits (112), Expect = 2e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD+I+WNS+I Y +H K+A+E+Y++M+ G P A+T+
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Score = 38.9 bits (89), Expect = 0.008
Identities = 16/42 (38%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEG-VTPDALTF 124
++VI+W ++ITGYV ++++++AL ++ KM +G V P+ T+
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Score = 35.4 bits (80), Expect = 0.089
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQA 94
RDV+TW +ITGY+ ++A EL+D++ +
Sbjct: 75 RDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Score = 34.7 bits (78), Expect = 0.15
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGV 103
R+V++WN++I GY + ALEL+D+M +
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Score = 33.5 bits (75), Expect = 0.34
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGV 103
RD +WN++ITG++ + + A L+D+M + V
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNV 295
Score = 31.6 bits (70), Expect = 1.3
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKM 88
R++I+WN++ITGY + + +A +L+ M
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 28.9 bits (63), Expect = 8.3
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGV 103
R++++WNS++ V + +A+ L+++M V
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein
At5g50390, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-H58 PE=2 SV=1
Length = 701
Score = 47.4 bits (111), Expect = 2e-05
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+++I+WN+L+ GY NH + DA++L++KM A V P+ +TF
Sbjct: 389 KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTF 429
Score = 34.3 bits (77), Expect = 0.20
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+ + WN++I GY H S++AL L M+ GV+ D T S
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLS 329
>sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protein
At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1
Length = 523
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RD++ WN+LI GY + S DA++ + MQ EG PDA+T S
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Score = 35.0 bits (79), Expect = 0.12
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
R V NS+I+ H K K+ALE++ M++ + PD +TF
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H13 PE=2 SV=3
Length = 612
Score = 47.0 bits (110), Expect = 3e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV++W SLI G H +++ AL LYD M + GV P+ +TF
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTF 342
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein
At3g49740 OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEG-VTPDALTFS 127
+DV++WNSLI+ Y H + ++A+ Y MQ EG V PDA TFS
Sbjct: 553 KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Score = 41.6 bits (96), Expect = 0.001
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+D++TWN++I+ Y + K A+ +Y +M GV PD TF
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
Score = 29.3 bits (64), Expect = 6.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 5 DVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
DV WN++ITG + ++EL+ +M GV D F+
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein
At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1
Length = 727
Score = 47.0 bits (110), Expect = 3e-05
Identities = 18/41 (43%), Positives = 33/41 (80%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+DV++WN++I+G ++ + +ALEL+++M AEG+ PD +TF
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Score = 41.6 bits (96), Expect = 0.001
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RDV W SLI+GYV + +++AL LY +M+ G+ P+ T +
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 427
Score = 38.9 bits (89), Expect = 0.008
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +2
Query: 2 RDVITWNSLITGYVNH---EKSKDALELYDKMQAEGVTPDALTFS 127
+DV++WNSLITGY + S ++L+ +M+A+ + P+A T +
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Score = 37.7 bits (86), Expect = 0.018
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
R+ ITW++++TGY + +S +A++L+ +M + G+ P T
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TNX6 |
| Definition |
tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
41 |
| Score (bit) |
52.8 |
| E-value |
9.0e-06 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917908|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_B08.
(127 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella paten... 53 9e-06
tr|A7R0F5|A7R0F5_VITVI Chromosome undetermined scaffold_306, who... 53 9e-06
tr|A7QCN4|A7QCN4_VITVI Chromosome chr12 scaffold_78, whole genom... 52 1e-05
tr|A7Q618|A7Q618_VITVI Chromosome chr14 scaffold_54, whole genom... 52 2e-05
tr|Q84ZM5|Q84ZM5_ORYSJ Os08g0153600 protein OS=Oryza sativa subs... 51 3e-05
tr|A3BWZ6|A3BWZ6_ORYSJ Putative uncharacterized protein OS=Oryza... 51 3e-05
tr|A2XRQ6|A2XRQ6_ORYSI Putative uncharacterized protein OS=Oryza... 51 3e-05
tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 51 3e-05
tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05
tr|Q67UW7|Q67UW7_ORYSJ Putative pentatricopeptide (PPR) repeat-c... 50 4e-05
tr|B8AHT0|B8AHT0_ORYSI Putative uncharacterized protein OS=Oryza... 50 4e-05
tr|A3A370|A3A370_ORYSJ Putative uncharacterized protein OS=Oryza... 50 4e-05
tr|A7R943|A7R943_VITVI Chromosome undetermined scaffold_3296, wh... 50 7e-05
tr|A7R427|A7R427_VITVI Chromosome undetermined scaffold_610, who... 50 7e-05
tr|A7R0U6|A7R0U6_VITVI Chromosome undetermined scaffold_324, who... 50 7e-05
tr|A7NSL4|A7NSL4_VITVI Chromosome chr18 scaffold_1, whole genome... 50 7e-05
tr|A5AY98|A5AY98_VITVI Putative uncharacterized protein (Chromos... 50 7e-05
tr|A5AXD2|A5AXD2_VITVI Putative uncharacterized protein OS=Vitis... 50 7e-05
tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 49 1e-04
tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04
tr|A7QUH8|A7QUH8_VITVI Chromosome undetermined scaffold_178, who... 49 1e-04
tr|A7P600|A7P600_VITVI Chromosome chr4 scaffold_6, whole genome ... 49 1e-04
tr|A7NVQ9|A7NVQ9_VITVI Chromosome chr18 scaffold_1, whole genome... 49 1e-04
tr|A5AJZ0|A5AJZ0_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04
tr|B8A020|B8A020_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04
tr|B6SSC4|B6SSC4_MAIZE Pentatricopeptide repeat protein PPR868-1... 49 1e-04
tr|A9STA3|A9STA3_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04
tr|A9SQ58|A9SQ58_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04
tr|Q8S693|Q8S693_ORYSJ Putative uncharacterized protein OJ1004_D... 48 2e-04
tr|Q10IY6|Q10IY6_ORYSJ Os03g0441400 protein OS=Oryza sativa subs... 48 2e-04
>tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_224041 PE=4 SV=1
Length = 986
Score = 52.8 bits (125), Expect = 9e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
++V +W S+ITGY H + K+ALEL+ +MQ EGV PD +TF
Sbjct: 679 KNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITF 719
Score = 48.1 bits (113), Expect = 2e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD++TW S+ITG H + K A L+ +M+ EGV PD + F
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Score = 47.8 bits (112), Expect = 3e-04
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RD+++WN++I G+V H K++ A + + MQ G+ PD +TF+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Score = 43.1 bits (100), Expect = 0.007
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
++V+ WN++IT YV HE+ +AL + + EG+ P++ TF+
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Score = 41.2 bits (95), Expect = 0.026
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+DV +WN L+ GYV H ++A +L+++M + V PD TF
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTF 214
Score = 37.7 bits (86), Expect = 0.29
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
R+V++W ++I G+ H + +A ++KM G+ P+ +TF
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416
>tr|A7R0F5|A7R0F5_VITVI Chromosome undetermined scaffold_306, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00011422001 PE=4 SV=1
Length = 664
Score = 52.8 bits (125), Expect = 9e-06
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+DV+TWN++I+GY H + AL L+DKM+ EG+ PD +TF
Sbjct: 356 KDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITF 396
Score = 36.2 bits (82), Expect = 0.84
Identities = 12/42 (28%), Positives = 29/42 (69%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
++++TWN++I GY+ + ++++ L+L+ +M G P+ + S
Sbjct: 255 KNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLS 296
>tr|A7QCN4|A7QCN4_VITVI Chromosome chr12 scaffold_78, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00035479001
PE=4 SV=1
Length = 707
Score = 52.0 bits (123), Expect = 1e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RDV +WN LI+GY H K+ALEL+ +MQ EGV P+ +TF+
Sbjct: 400 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441
Score = 40.0 bits (92), Expect = 0.058
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
R+ I+WNS+++GY + + DAL L+++MQA P+ +T
Sbjct: 297 RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVT 336
Score = 37.7 bits (86), Expect = 0.29
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
RDV+ W ++IT Y E+ AL L+ KMQ EG D +T
Sbjct: 196 RDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEIT 235
>tr|A7Q618|A7Q618_VITVI Chromosome chr14 scaffold_54, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031188001
PE=4 SV=1
Length = 471
Score = 51.6 bits (122), Expect = 2e-05
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
R+V+TW ++ITG H + K+ALEL D+M A GV P+A+TF+
Sbjct: 280 RNVLTWTAMITGLARHGRGKEALELLDEMVAYGVKPNAVTFT 321
>tr|Q84ZM5|Q84ZM5_ORYSJ Os08g0153600 protein OS=Oryza sativa subsp.
japonica GN=OJ1066_B03.110 PE=4 SV=1
Length = 613
Score = 51.2 bits (121), Expect = 3e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV+ WN++I+GY H K+A+ L+++M+ EGV P+ +TF
Sbjct: 305 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITF 345
Score = 37.4 bits (85), Expect = 0.37
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAE-GVTPDALTFS 127
R++++WN+++ GYV + + DAL L+ M E V P+A T S
Sbjct: 203 RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLS 245
>tr|A3BWZ6|A3BWZ6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_027568 PE=4 SV=1
Length = 608
Score = 51.2 bits (121), Expect = 3e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV+ WN++I+GY H K+A+ L+++M+ EGV P+ +TF
Sbjct: 300 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITF 340
Score = 37.4 bits (85), Expect = 0.37
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAE-GVTPDALTFS 127
R++++WN+++ GYV + + DAL L+ M E V P+A T S
Sbjct: 198 RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLS 240
>tr|A2XRQ6|A2XRQ6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15309 PE=4 SV=1
Length = 613
Score = 51.2 bits (121), Expect = 3e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RDV+ WN++I+GY H K+A+ L+++M+ EGV P+ +TF
Sbjct: 305 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITF 345
Score = 37.4 bits (85), Expect = 0.37
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAE-GVTPDALTFS 127
R++++WN+++ GYV + + DAL L+ M E V P+A T S
Sbjct: 203 RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLS 245
>tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1
Length = 986
Score = 50.8 bits (120), Expect = 3e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
++V +W S+I GY H + K+ALEL+ +MQ EGV PD +TF
Sbjct: 679 KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITF 719
Score = 48.1 bits (113), Expect = 2e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD++TW S+ITG H + K A L+ +M+ EGV PD + F
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Score = 47.8 bits (112), Expect = 3e-04
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RD+++WN++I G+V H K++ A + + MQ G+ PD +TF+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Score = 43.1 bits (100), Expect = 0.007
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
++V+ WN++IT YV HE+ +AL + + EG+ P++ TF+
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Score = 41.2 bits (95), Expect = 0.026
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+DV +WN L+ GYV H ++A +L+++M + V PD TF
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTF 214
Score = 37.7 bits (86), Expect = 0.29
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
R+V++W ++I G+ H + +A ++KM G+ P+ +TF
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416
>tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_192620 PE=4 SV=1
Length = 902
Score = 50.8 bits (120), Expect = 3e-05
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
R+VI+WN++I G H + +DAL+L+++M+ EGV PD +TF
Sbjct: 594 RNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTF 634
Score = 49.3 bits (116), Expect = 1e-04
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD++ +N++I GY H K+AL+L+D++Q EG+ PD +T+
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTY 533
Score = 40.8 bits (94), Expect = 0.034
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD+I WN++I G ++A E+Y++MQ EGV P+ +T+
Sbjct: 291 RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITY 331
Score = 40.0 bits (92), Expect = 0.058
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
+ V++W I GY + +S+ A E++ KM+ EGV P+ +T+
Sbjct: 190 KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITY 230
Score = 37.0 bits (84), Expect = 0.49
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALT 121
R V +WN+++ GY+ + + AL+L +MQ G+ PD T
Sbjct: 89 RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTT 128
Score = 36.6 bits (83), Expect = 0.64
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
+DVI+W ++I G +AL +Y +MQ GV P+ +T++
Sbjct: 392 KDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYT 433
>tr|Q67UW7|Q67UW7_ORYSJ Putative pentatricopeptide (PPR)
repeat-containing protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0050G13.19 PE=4 SV=1
Length = 922
Score = 50.4 bits (119), Expect = 4e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTF 124
RD+ TWN++ITGY H ++A+++Y M++ GV P+ +TF
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTF 654
Score = 35.8 bits (81), Expect = 1.1
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 8 VITWNSLITGYVNHEKSKDALELYDKM 88
V++WN+LITGY+ + +A EL+DKM
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKM 379
Score = 34.7 bits (78), Expect = 2.4
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKM 88
RDV +WNS++TGY + + DA L++KM
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKM 184
Score = 34.7 bits (78), Expect = 2.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
R++++W +I+GY E A +++ KM EG+ PD F+
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFA 228
Score = 32.7 bits (73), Expect = 9.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 2 RDVITWNSLITGYVNHEKSKDALELYDKMQAEGVTPDALTFS 127
RD+I WNS+I+ Y ++ A +LYD + + A+ S
Sbjct: 63 RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
|