BP917914
Clone id YMU001_000107_C05
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAGCATAAACAGTTCTATCAAAGGTACCTAACACTACCAATCCCACCAAAACAAGCATA
AACAGTTCTACCAAAGGTACCTAACACTATCAATCCCACCAAACCAAGCATAAACAGTTA
TACCAAAAACTCCCAAAACTACCAGTCACCAGTTGCTCTAGAATCTCCTTGTCGAGCAAT
GACATATCTTCACTGATTCCGTATCGACATAGCATCCTTTGACTAGCAGCCAAATCAGCT
TCGATCACATTAATTTCTGCGTCATCGCTAGTGTTGGCCTCTCTCAGTGTTTCCAGCTGG
GTCTCATATTCCTTGATGATGTCCATAATCTGTCCTCAAGAGTGTTTCCTTCTTCTGCTT
CAGAGACATTGTCAGCTCTTTCAGCCTATCGGCTACCCCCACACATGTCCGAGGGACTCT
CCCAACTATAGCTTCAAGGTCCGCAATATAATCAGGTGTCTTCTCCTCATGACGATGTGG
GGGG
■■Homology search results ■■ -
sp_hit_id Q6P5D4
Definition sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus musculus
Align length 59
Score (bit) 37.0
E-value 0.047
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917914|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_C05.
(484 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus musc... 37 0.047
sp|Q46DR6|SYR_METBF Arginyl-tRNA synthetase OS=Methanosarcina ba... 30 4.4
sp|Q55EI3|VP13E_DICDI Putative vacuolar protein sorting-associat... 30 7.5
sp|P53897|YNP7_YEAST Uncharacterized protein YNL157W OS=Saccharo... 29 9.8
sp|Q8TUM3|SYR_METAC Arginyl-tRNA synthetase OS=Methanosarcina ac... 29 9.8
sp|Q01722|GCR2_YEAST Glycolytic genes transcriptional activator ... 29 9.8
sp|Q65RB5|NADE_MANSM NH(3)-dependent NAD(+) synthetase OS=Mannhe... 29 9.8

>sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus
musculus GN=Cep135 PE=2 SV=1
Length = 1140

Score = 37.0 bits (84), Expect = 0.047
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -3

Query: 332 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDKEILE 156
Q+ + EYET L L+E T+ D EIN + L AS + L G S ++S + L+
Sbjct: 766 QLKVTVAEYETSLNQLQETLTTRDREINSLRRQLDASHKELDDVGKSREISFKENRRLQ 824


>sp|Q46DR6|SYR_METBF Arginyl-tRNA synthetase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=argS PE=3 SV=1
Length = 569

Score = 30.4 bits (67), Expect = 4.4
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2

Query: 465 EKTPDYIADLEAIVGRVPRTCVGVADRL-KELTMSLKQKKETLLRTDYGH 319
+K P+Y+ +++A++ +V V D K +++++ KETLLR + H
Sbjct: 201 DKNPEYVKEIDALMEKVEAGDVKTIDSFYKAVSLAISGIKETLLRLNVVH 250


>sp|Q55EI3|VP13E_DICDI Putative vacuolar protein sorting-associated
protein 13E OS=Dictyostelium discoideum GN=vps13E PE=3
SV=1
Length = 4241

Score = 29.6 bits (65), Expect = 7.5
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3

Query: 21 KGT*HYQSHQNKHKQFYQRYLTLSIPPNQA*TVIPKTPKTTSHQLL-*NLLVEQ*HIFTD 197
+GT S + +H + Y L++ + PN ++ TP+ H L +LV+Q TD
Sbjct: 2935 RGTIVIDSSEKRHSRSYHLGLSVDLAPNLKTKIVVFTPRFVFHNLFPYTILVQQCGANTD 2994

Query: 198 SVST*HPLTSSQISFDHIN 254
S + P + S + IN
Sbjct: 2995 STTIRIPPSCSVPFYYFIN 3013


>sp|P53897|YNP7_YEAST Uncharacterized protein YNL157W
OS=Saccharomyces cerevisiae GN=YNL157W PE=1 SV=1
Length = 168

Score = 29.3 bits (64), Expect = 9.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1

Query: 28 PNTTNPTKTSINSSTKGT*HYQSHQTKHKQLYQKLPKLP 144
PN++NP T +N+ GT +LY+ KLP
Sbjct: 8 PNSSNPDLTKLNNGESGTIDTSKFSPNEMKLYKMYGKLP 46


>sp|Q8TUM3|SYR_METAC Arginyl-tRNA synthetase OS=Methanosarcina
acetivorans GN=argS PE=3 SV=1
Length = 567

Score = 29.3 bits (64), Expect = 9.8
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2

Query: 465 EKTPDYIADLEAIVGRVPRTCVGVADRL-KELTMSLKQKKETLLRTDYGH 319
+K PDY+ ++A++ +V + +R K +++++ KETLLR + H
Sbjct: 199 DKNPDYVKKIDALMEKVEVGDLQTIERFDKAVSLAIAGIKETLLRLNVVH 248


>sp|Q01722|GCR2_YEAST Glycolytic genes transcriptional activator
GCR2 OS=Saccharomyces cerevisiae GN=GCR2 PE=1 SV=1
Length = 534

Score = 29.3 bits (64), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1

Query: 19 SKVPNTTNPTKTSINSSTKGT*HYQSHQTKHKQLYQKLPKL 141
S + N +NP T N+S+ T + Q ++ QL+ K+ KL
Sbjct: 102 SAISNASNPATTGNNASSSATSNGIYTQAQYSQLFAKISKL 142


>sp|Q65RB5|NADE_MANSM NH(3)-dependent NAD(+) synthetase
OS=Mannheimia succiniciproducens (strain MBEL55E)
GN=nadE PE=3 SV=1
Length = 250

Score = 29.3 bits (64), Expect = 9.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3

Query: 335 GQIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISED--MSLLDKEI 162
GQI+ I Y+ ++ L S+ +NV++ +L A RM+ + ++ +L +
Sbjct: 80 GQIISIAPWYDLIMQQLSPVLNSEPERVNVLKGNLMARLRMIALFTTAQSHRSIVLGTDN 139

Query: 161 LEQLVTGSFGSF 126
+ +TG F F
Sbjct: 140 AAEWLTGYFTKF 151


tr_hit_id Q3UVI6
Definition tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 59
Score (bit) 37.0
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917914|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_C05.
(484 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.49
tr|Q50HR4|Q50HR4_CRIGR Centrosomal protein 135 OS=Cricetulus gri... 34 3.1
tr|A3Q5K0|A3Q5K0_MYCSJ Shikimate dehydrogenase OS=Mycobacterium ... 34 3.1
tr|B4Y0U8|B4Y0U8_9METZ Notch OS=Amphimedon queenslandica PE=2 SV=1 34 4.1
tr|Q4EB70|Q4EB70_9RICK Putative uncharacterized protein OS=Wolba... 33 5.4
tr|A5BXS7|A5BXS7_VITVI Putative uncharacterized protein OS=Vitis... 33 9.1
tr|B5Y8S4|B5Y8S4_COPPD Thymidylate synthase, flavin-dependent OS... 33 9.2

>tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Cep135 PE=2 SV=1
Length = 1031

Score = 37.0 bits (84), Expect = 0.49
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -3

Query: 332 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDKEILE 156
Q+ + EYET L L+E T+ D EIN + L AS + L G S ++S + L+
Sbjct: 766 QLKVTVAEYETSLNQLQETLTTRDREINSLRRQLDASHKELDDVGKSREISFKENRRLQ 824


>tr|Q50HR4|Q50HR4_CRIGR Centrosomal protein 135 OS=Cricetulus
griseus GN=cep135 PE=2 SV=1
Length = 1145

Score = 34.3 bits (77), Expect = 3.1
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3

Query: 332 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDKEILE 156
Q+ + EYET L L++ + D E+N + L A+ + L G S D+S + L+
Sbjct: 766 QMRATVTEYETSLNQLKDTLANRDREVNSLRRQLDATHKELDDVGKSRDISFKENRRLQ 824


>tr|A3Q5K0|A3Q5K0_MYCSJ Shikimate dehydrogenase OS=Mycobacterium sp.
(strain JLS) GN=Mjls_4662 PE=4 SV=1
Length = 274

Score = 34.3 bits (77), Expect = 3.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3

Query: 329 IMDIIKEYETQLETLREANT--SDDAEINVIEADLAASQRMLCRYGISEDMSLL 174
++D++ E E + NT +DD + D A QR++ +YG+ D S++
Sbjct: 74 VLDLVDEVEPSARIINAVNTIVNDDGHLTASNTDYLAVQRLIDQYGLEADRSVM 127


>tr|B4Y0U8|B4Y0U8_9METZ Notch OS=Amphimedon queenslandica PE=2 SV=1
Length = 1665

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +2

Query: 26 YLTLPIPPKQA*TVLPKVPNTINPTKPSINSYTKNSQNY---QSPVALESPCRAM----- 181
Y P PPK+ P+T++PT INS T + ++Y Q+ V SP + +
Sbjct: 1562 YQCFPSPPKEVGEYCYPKPHTVDPTADIINSLTPSPEDYSSQQTSVETSSPSQYLPQHQS 1621

Query: 182 TYLH*FRIDIASFD*QPNQL 241
T L + D ++ P QL
Sbjct: 1622 TVLRHYAYDYSAATYNPAQL 1641


>tr|Q4EB70|Q4EB70_9RICK Putative uncharacterized protein
OS=Wolbachia endosymbiont of Drosophila ananassae
GN=WwAna0174 PE=4 SV=1
Length = 210

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = -3

Query: 323 DIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDKEILEQLV 147
DI+ +++ LR+ NTS D ++N + + A S++ + +G+ + DKEI+++ +
Sbjct: 30 DILNARRARVDLLRD-NTSLDKDVNFAKLNKALSEKFVDNHGLLSEFDKEDKEIVQERI 87


>tr|A5BXS7|A5BXS7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008447 PE=4 SV=1
Length = 393

Score = 32.7 bits (73), Expect = 9.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2

Query: 38 PIPPKQA*TVLPKVPNTINPTKPSINSYTKNSQNYQSPVALESPCRAMTYLH*FRIDIAS 217
P PP + P +P NP++ + + + Q P+ CRA ++ DIA+
Sbjct: 65 PAPPAEPQEPQPPLPEPQNPSEIAPKAVIRRPMLTQPPIKGNLDCRARSFHSELCFDIAT 124

Query: 218 FD*QPNQLRSH*FLR 262
F +P +S LR
Sbjct: 125 FQLRPELAQSFHLLR 139


>tr|B5Y8S4|B5Y8S4_COPPD Thymidylate synthase, flavin-dependent
OS=Coprothermobacter proteolyticus (strain ATCC 35245 /
DSM 5265 / BT) GN=thyX PE=4 SV=1
Length = 229

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3

Query: 36 YQSHQNKHKQFYQRYLTLSIPPNQA*TVIPKTPKTT 143
Y+ H ++ K+ Y++ L + IP A VIP++ KTT
Sbjct: 119 YRKHIDESKELYKQLLAMGIPKEDARFVIPQSVKTT 154