BP917920
Clone id YMU001_000107_D02
Library
Length 426
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGAAGCGGCTGGCCGGCCGCAGGAATTGTTTTTTTCTGTTTTTAATTCAAATGCTTATG
CATATGGATTCTATACTCTTTTAGGTTTAGACAAAATTCCACAAGGCTCTTAGAGCCTAC
TCATGTAGTGCACCGACTACTCATGGGTTTGGATTCAAAAATTCAAGGAAGATGTACTCG
TATAGACCTCCCAAGGACTAGTATCACTGTATAGCTTCATTTTCGAGCCATTATAGATAA
GGATGGCTACAATGACATCATCATTATTTGATTCATTTGTTGCAAAAAGAATCACTTCAA
TAAGTCAGCTCCTATTTGATATCTCCAAAATATCGATCAACTCACTCTGCTCATGGGTTT
GATTACCCACACATGCTCCAGTAGACCTCGTGCTGAAACAGCTATGCATTTGTATATTAC
ACGCTG
■■Homology search results ■■ -
sp_hit_id Q8CH18
Definition sp|Q8CH18|CCAR1_MOUSE Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus
Align length 66
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917920|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D02.
(390 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CH18|CCAR1_MOUSE Cell division cycle and apoptosis regulato... 30 3.8
sp|Q8IX12|CCAR1_HUMAN Cell division cycle and apoptosis regulato... 29 8.4

>sp|Q8CH18|CCAR1_MOUSE Cell division cycle and apoptosis regulator
protein 1 OS=Mus musculus GN=Ccar1 PE=2 SV=1
Length = 1146

Score = 30.0 bits (66), Expect = 3.8
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -3

Query: 367 SCFSTRSTGACVGNQTHEQSELIDILEISNRS*LIEVILFATNESNNDDVIVAILIYNGS 188
SCF + T ++ HE+SE + + NR L+ ES + + V +++YNG+
Sbjct: 969 SCFYRKLTDTSKDDENHEESEALQEDMLGNR--LLLPTPTIKQESKDGEENVGLIVYNGA 1026

Query: 187 KMKLYS 170
+ + S
Sbjct: 1027 MVDVGS 1032


>sp|Q8IX12|CCAR1_HUMAN Cell division cycle and apoptosis regulator
protein 1 OS=Homo sapiens GN=CCAR1 PE=1 SV=2
Length = 1150

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3

Query: 367 SCFSTRSTGACVGNQTHEQSELIDILEISNRS*LIEVILFATNESNNDDVIVAILIYNGS 188
SCF + T + HE+SE + + NR L+ ES + + V +++YNG+
Sbjct: 973 SCFYRKLTDTSKDEENHEESESLQEDMLGNR--LLLPTPTVKQESKDVEENVGLIVYNGA 1030

Query: 187 KMKLYS 170
+ + S
Sbjct: 1031 MVDVGS 1036


tr_hit_id Q75JD0
Definition tr|Q75JD0|Q75JD0_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum
Align length 58
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917920|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D02.
(390 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q75JD0|Q75JD0_DICDI Putative uncharacterized protein OS=Dicty... 33 9.3

>tr|Q75JD0|Q75JD0_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum PE=4 SV=1
Length = 426

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -3

Query: 385 CNIQMHSCFSTRSTGACVGNQTHEQSELIDI--LEISNRS*LIEVILFATNESNNDDV 218
CN ++ ++ + T C+ N+ S L++ ++I + ++E + F N +NN+++
Sbjct: 341 CNNLFNNIYNQKQTNGCITNEQFSNSHLLNASNIKIIDNKEILEFVSFNNNNNNNNNI 398