BP917921
Clone id YMU001_000107_D03
Library
Length 261
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGTATCTTGCATTCTCCTCTTCCTGTAACATCCGCGCCAAGTGTGCATCATCCAGAGCAA
AATTTCCTTCATCAGCTTCCAGACCATAATCCTCCTGTAGAAACTTTGCCAGGATTTCAT
CTTCTTCAATCTGCCTAGCCCTGTTAGCAGCAGCAGACACAATTCTCTCAGCAGTTGCGC
TGCTGCTTGGACACTCCAAACTATCTACATCGATAGGCCGTTCCATTCCTCCAAATGATG
ACCCACTTGTACTACCATCTC
■■Homology search results ■■ -
sp_hit_id P70348
Definition sp|P70348|GCM1_MOUSE Chorion-specific transcription factor GCMa OS=Mus musculus
Align length 41
Score (bit) 32.3
E-value 0.77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917921|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D03.
(261 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P70348|GCM1_MOUSE Chorion-specific transcription factor GCMa ... 32 0.77
sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo ... 30 3.7
sp|Q7M3Y3|TNNI_CHLNI Troponin I OS=Chlamys nipponensis akazara P... 30 4.8
sp|Q93971|TRPG_CAEEL Transient receptor potential channel OS=Cae... 29 6.3
sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila me... 29 8.5

>sp|P70348|GCM1_MOUSE Chorion-specific transcription factor GCMa
OS=Mus musculus GN=Gcm1 PE=1 SV=1
Length = 436

Score = 32.3 bits (72), Expect = 0.77
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1

Query: 16 PLPVTSAPSVHHPEQNFLHQLPDHNP--PVETLPGFHLLQS 132
PLPV S P + P QN L LP P P PG H L S
Sbjct: 317 PLPVASWPYDYFPSQNSLEHLPQQVPSEPPAAQPGCHPLWS 357


>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo
sapiens GN=REST PE=1 SV=2
Length = 1097

Score = 30.0 bits (66), Expect = 3.7
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -3

Query: 253 STSGSSFGGMERPIDVDSLECPSSSATAERIVSAAANRARQIEEDEILAKFLQEDYGLEA 74
ST M P V+ E S +A A + AAN +++I+EDE + D
Sbjct: 964 STVEEPVSPMLPPSAVEEREAVSKTALASPPATMAANESQEIDEDEGIHSHEGSDLSDNM 1023

Query: 73 DEGNFALDDA--HLARMLQEEENAR 5
EG+ DD+ H AR + +E + +
Sbjct: 1024 SEGS---DDSGLHGARPVPQESSRK 1045


>sp|Q7M3Y3|TNNI_CHLNI Troponin I OS=Chlamys nipponensis akazara PE=1
SV=2
Length = 292

Score = 29.6 bits (65), Expect = 4.8
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3

Query: 187 SSSATAERIVSAAAN--RARQIEEDEILAKFLQEDYGLEADEGNFALDDAHLARMLQEEE 14
S SA AE A A R +Q EE+E A+ +E+Y + +E L R QEEE
Sbjct: 45 SYSAPAEPAYDAEAENRRRQQQEEEEAAARAAEEEYNRQQEE---------LRRQRQEEE 95

Query: 13 NAR 5
R
Sbjct: 96 RQR 98


>sp|Q93971|TRPG_CAEEL Transient receptor potential channel
OS=Caenorhabditis elegans GN=gon-2 PE=1 SV=4
Length = 2032

Score = 29.3 bits (64), Expect = 6.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3

Query: 162 ILSAVALLLGHSKLSTSIGRSIPPNDDPLV 251
IL V LL + T+IGR P+ DPLV
Sbjct: 1708 ILECVRALLNQNNAPTAIGRCFSPSPDPLV 1737


>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila
melanogaster GN=osa PE=1 SV=1
Length = 2716

Score = 28.9 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1

Query: 22 PVTSAPSVH---HPEQNFLHQLPDHNPPVETLPG 114
P+ P H HP Q+ HQ P PP +T PG
Sbjct: 1722 PLQQQPPSHQHPHPHQHPQHQHPHQMPPNQTAPG 1755


tr_hit_id A5B191
Definition tr|A5B191|A5B191_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 92
Score (bit) 45.1
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917921|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D03.
(261 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5B191|A5B191_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002
tr|A9TPP1|A9TPP1_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.003
tr|A2DVR7|A2DVR7_TRIVA Putative uncharacterized protein OS=Trich... 34 3.2
tr|Q1LVF9|Q1LVF9_DANRE Novel kinase domain containing protein (F... 33 7.1
tr|B8BYA7|B8BYA7_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.1
tr|Q9MAS8|Q9MAS8_ARATH F13M7.22 protein OS=Arabidopsis thaliana ... 33 9.3
tr|Q93XZ6|Q93XZ6_ARATH Putative uncharacterized protein At1g0479... 33 9.3

>tr|A5B191|A5B191_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_037878 PE=4 SV=1
Length = 625

Score = 45.1 bits (105), Expect = 0.002
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = -3

Query: 256 GSTSGSSFGG---MERPIDVDSLECPSSSATAERIVSAAAN-----RARQIEEDEILAKF 101
GST S G ME I++D + P A R + N RARQIE DEILA+
Sbjct: 487 GSTRSQSHHGQGVMEPVIEIDE-QSPEIRHVASRNGGSMNNDDSDARARQIEADEILARE 545

Query: 100 LQEDYGLEADEGNFALDDAHLARMLQEEENAR 5
LQE E DAH+A+MLQ++E +
Sbjct: 546 LQEQLYHEMPVDGGVGIDAHIAQMLQQQEQVQ 577


>tr|A9TPP1|A9TPP1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_171239 PE=4 SV=1
Length = 693

Score = 44.3 bits (103), Expect = 0.003
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -3

Query: 148 ANRARQIEEDEILAKFLQEDYGLEADEGNFALDDAHLARMLQEEENA 8
A RARQ+ EDE +A+ LQE + LE G+ D ARMLQ+EEN+
Sbjct: 426 AERARQLSEDERVARELQEAFALEDMGGSQPPTDEMFARMLQDEENS 472


>tr|A2DVR7|A2DVR7_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_210100 PE=4 SV=1
Length = 143

Score = 34.3 bits (77), Expect = 3.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1

Query: 19 LPVTSAPSVHHPEQNFLHQLPDHNPPVETLPGFHL 123
LP+ PS+H+P+Q F +P P +E++ H+
Sbjct: 99 LPIAPQPSIHYPQQTFTSNIPHSLPTLESVGANHI 133


>tr|Q1LVF9|Q1LVF9_DANRE Novel kinase domain containing protein
(Fragment) OS=Danio rerio GN=mylk4 PE=4 SV=1
Length = 640

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3

Query: 220 RPIDVDSLECPSSSATAERIVSAAANRARQIEEDEILAKFLQEDYGLEADE 68
R + L P+SS ++I++A R + EE+E K +E+ GLEA E
Sbjct: 287 RLTEESQLAAPTSSGQNDKIITATPERVEEEEEEEKELKEEEEEAGLEAAE 337


>tr|B8BYA7|B8BYA7_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_3621 PE=4 SV=1
Length = 815

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -3

Query: 169 ERIVSAAANRARQIEEDEILAKFLQEDYGLEADEGNFALDDAHLARMLQEEENA 8
ERI +A A+ R++ E++ A+ Q + L+ ++ A A RML+EE++A
Sbjct: 526 ERIAAAKADEERRLREEQEAAEKAQVELELKHEQERIAAAKADEERMLREEQDA 579


>tr|Q9MAS8|Q9MAS8_ARATH F13M7.22 protein OS=Arabidopsis thaliana
GN=F13M7.22 PE=4 SV=1
Length = 716

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -3

Query: 136 RQIEEDEILAKFLQEDYGLEADEGNFALDDAHLARMLQEEENA 8
RQIE DEILA+ LQE E D +AR +++EEN+
Sbjct: 401 RQIEADEILARELQEQLYREESLIRHEQIDEIIARSMEQEENS 443


>tr|Q93XZ6|Q93XZ6_ARATH Putative uncharacterized protein At1g04790;
F13M7.22 (At1g04790) OS=Arabidopsis thaliana
GN=At1g04790/F13M7.22 PE=2 SV=1
Length = 634

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -3

Query: 136 RQIEEDEILAKFLQEDYGLEADEGNFALDDAHLARMLQEEENA 8
RQIE DEILA+ LQE E D +AR +++EEN+
Sbjct: 391 RQIEADEILARELQEQLYREESLIRHEQIDEIIARSMEQEENS 433