BP917926
Clone id YMU001_000107_D08
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCTGGCAAACACACCCTGTACCTTGCTTAGCTAGAAACAAATTTCCATCACTTGATTGG
ACACTGTACTGTCGAGTTTGGTTGCAAATTGTGATTGCAAAATCTTAGTGCAAATCGGTA
AGAAAAACTCACTCGAAATTGTACAAAAATATGGAGGACATTGTTGTTATGGCTGAGTAA
TCTCAGAAAAGAGACAAAACTGTGGTACAGCTTCTTTAAAACACTTCACAAGGACACTTC
CTTGATTGATGCTTACTAACACTATCGTGAGCCTCTGAAAAAAGGATTTTGAGCCTTTAG
CTCTCGCATTTTCTTTTGGTAATCTTTTGTCCGAACAAGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917926|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D08.
(340 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q14WA0
Definition tr|Q14WA0|Q14WA0_9VIRU ORF6 OS=Ranid herpesvirus 2
Align length 54
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917926|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_D08.
(340 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q14WA0|Q14WA0_9VIRU ORF6 OS=Ranid herpesvirus 2 PE=4 SV=1 35 2.4
tr|B6NCX7|B6NCX7_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3
tr|B6MQ71|B6MQ71_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3

>tr|Q14WA0|Q14WA0_9VIRU ORF6 OS=Ranid herpesvirus 2 PE=4 SV=1
Length = 270

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1

Query: 1 CWQTHPVPCLARNKFPSLDW-TLYCRVWLQIVIAKS*CKSVRKTHSKLYKNMED 159
C VP +A + F L TL CR++LQ +A S C + T + LYK++ D
Sbjct: 91 CSLIEDVPAVAEDIFEQLRTSTLRCRLYLQFYLAHSSCPELPHTQTFLYKDITD 144


>tr|B6NCX7|B6NCX7_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_127100 PE=4 SV=1
Length = 607

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2

Query: 128 LTRNCTKIWRTLLLWLSNLRKETKLWYSFFKTLHKDTSLIDAY 256
L+ NC WR +L LS L K + +S F LH D +LID +
Sbjct: 96 LSINCLSSWREVLSVLSELPKVKSVSFS-FNLLHNDKNLIDTW 137


>tr|B6MQ71|B6MQ71_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_124159 PE=4 SV=1
Length = 603

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2

Query: 128 LTRNCTKIWRTLLLWLSNLRKETKLWYSFFKTLHKDTSLIDAY 256
L+ NC WR +L LS L K + +S F LH D +LID +
Sbjct: 96 LSINCLSSWREVLSVLSELPKVKSVSFS-FNLLHNDKNLIDTW 137