BP917930 |
Clone id |
YMU001_000107_E03 |
Library |
YMU01 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_E03. |
Accession |
BP917930 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1954Contig1 |
Sequence |
ATCAAGAAAATCATGGTTGCACTTGATTGAACATGTAGCTTCTTTCCTGAAGCCTACTAG CATAACTTTGTGACCTTAGACATTGAAAATATATCTATTACCCGTACCTATCAATCTGTA GGTATTACAAGCAAGATTCAATGGATCCATTGATGGTTATAAGTCTGCACAAAGTAGCCT TTCCTCCCGACACTAGCTCTCAAAACCAAGCCACTTATCTATGTTATGGCCGAAGTACAC TCTAGTTACCACCCCAAAAGCACTAGTATTAGGATGGGAGGTGCTCAAAGTAACAATTGA AAAATAAACAAATATACAAGCATGCCGCTATGCTATCGGTGAACCTTAAAAGAGTCCATG ACACTGCGAAAACTAACGTAAGTTTCTTTCTTTCATTACGGCTTCGATTTTTGAAACGTC CTCTGGTGAATCAACTCCATGAGCTTCATGGTCGACTTTAATGACCTTCATTTTATAACC ATTTTCTAGCACCTTCAACTGCTCCAAATCTTCTTCAAGCTGAAGAGGCGACGAAGGTAG GCAAACATATGTGTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3A370 |
Definition |
sp|Q3A370|KDSB_PELCD 3-deoxy-manno-octulosonate cytidylyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) |
Align length |
54 |
Score (bit) |
58.9 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P1L5 |
Definition |
tr|A7P1L5|A7P1L5_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
57 |
Score (bit) |
99.8 |
E-value |
9.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917930|Adiantum capillus-veneris mRNA, clone: YMU001_000107_E03. (556 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P1L5|A7P1L5_VITVI Chromosome chr19 scaffold_4, whole genome... 100 9e-20 tr|A5AKL0|A5AKL0_VITVI Putative uncharacterized protein OS=Vitis... 100 9e-20 tr|B3TM30|B3TM30_ELAGV 3-deoxy-manno-octulosonate cytidylyltrans... 98 3e-19 tr|Q688Y2|Q688Y2_ORYSJ Os05g0561500 protein OS=Oryza sativa subs... 96 1e-18 tr|A3B6S7|A3B6S7_ORYSJ Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|Q9M4G3|Q9M4G3_MAIZE CMP-KDO synthetase OS=Zea mays GN=cks PE=... 96 2e-18 tr|B6TZC2|B6TZC2_MAIZE 3-deoxy-manno-octulosonate cytidylyltrans... 96 2e-18 tr|B8AWQ3|B8AWQ3_ORYSI Putative uncharacterized protein OS=Oryza... 95 2e-18 tr|A9NQZ3|A9NQZ3_PICSI Putative uncharacterized protein OS=Picea... 94 6e-18 tr|A7R401|A7R401_VITVI Chromosome undetermined scaffold_596, who... 93 8e-18 tr|A5BCX4|A5BCX4_VITVI Putative uncharacterized protein OS=Vitis... 93 8e-18 tr|Q9C920|Q9C920_ARATH Putative deoxyoctulonosic acid synthetase... 93 1e-17 tr|Q945P4|Q945P4_ARATH F14G24.28/F14G24.28 (At1g53000/F14G24.28)... 93 1e-17 tr|A9U265|A9U265_PHYPA Predicted protein OS=Physcomitrella paten... 92 2e-17 tr|Q9M4D3|Q9M4D3_MAIZE CMP-KDO synthetase (Fragment) OS=Zea mays... 90 9e-17 tr|Q6MD00|Q6MD00_PARUW Probable 3-deoxy-manno-octulosonate cytid... 70 1e-10 tr|A1HU41|A1HU41_9FIRM 3-deoxy-D-manno-octulosonate cytidylyltra... 65 2e-09 tr|Q01T78|Q01T78_SOLUE 3-deoxy-D-manno-octulosonate cytidylyltra... 59 1e-07 tr|A7AKM8|A7AKM8_9PORP Putative uncharacterized protein OS=Parab... 59 1e-07 tr|B7BCS1|B7BCS1_9PORP Putative uncharacterized protein OS=Parab... 58 3e-07 tr|B8CZC2|B8CZC2_9FIRM 3-deoxy-D-manno-octulosonate cytidylyltra... 58 4e-07 tr|Q7P7V1|Q7P7V1_FUSNV 3-deoxy-manno-octulosonate cytidylyltrans... 56 1e-06 tr|Q0BQL1|Q0BQL1_GRABC 3-deoxy-manno-octulosonate cytidylyltrans... 55 3e-06 tr|B3EAK6|B3EAK6_GEOLS 3-deoxy-D-manno-octulosonate cytidylyltra... 55 3e-06 tr|Q0YJ25|Q0YJ25_9DELT 3-deoxy-D-manno-octulosonate cytidylyltra... 55 3e-06 tr|Q8A9S0|Q8A9S0_BACTN 3-deoxy-manno-octulosonate cytidylyltrans... 55 3e-06 tr|A6L9D4|A6L9D4_PARD8 3-deoxy-manno-octulosonate cytidylyltrans... 55 3e-06 tr|A6L5J0|A6L5J0_BACV8 3-deoxy-manno-octulosonate cytidylyltrans... 55 3e-06 tr|B6VZG1|B6VZG1_9BACE Putative uncharacterized protein OS=Bacte... 55 3e-06 tr|B7B3C8|B7B3C8_9FIRM Putative uncharacterized protein OS=Mitsu... 54 4e-06
>tr|A7P1L5|A7P1L5_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027664001 PE=4 SV=1 Length = 297
Score = 99.8 bits (247), Expect = 9e-20 Identities = 48/57 (84%), Positives = 52/57 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNL 379 Y LP +PLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD+PEDV KIE+ M+ERNL Sbjct: 240 YPDLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNL 296
>tr|A5AKL0|A5AKL0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036570 PE=4 SV=1 Length = 297
Score = 99.8 bits (247), Expect = 9e-20 Identities = 48/57 (84%), Positives = 52/57 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNL 379 Y LP +PLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD+PEDV KIE+ M+ERNL Sbjct: 240 YPDLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNL 296
>tr|B3TM30|B3TM30_ELAGV 3-deoxy-manno-octulosonate cytidylyltransferase/nucleotidyltransferase OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 295
Score = 97.8 bits (242), Expect = 3e-19 Identities = 46/57 (80%), Positives = 53/57 (92%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNL 379 Y LP +PLQLEEDLEQLKVLENGYKMKVIKVDH+AHGVD+PEDV KIEA+M+ER++ Sbjct: 238 YPQLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIEALMRERSI 294
>tr|Q688Y2|Q688Y2_ORYSJ Os05g0561500 protein OS=Oryza sativa subsp. japonica GN=OJ1115_B06.12 PE=2 SV=1 Length = 297
Score = 96.3 bits (238), Expect = 1e-18 Identities = 45/58 (77%), Positives = 53/58 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNLR 376 Y LP +PLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVD+PEDV KIEA+M+ RN++ Sbjct: 240 YPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNIQ 297
>tr|A3B6S7|A3B6S7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018749 PE=4 SV=1 Length = 421
Score = 96.3 bits (238), Expect = 1e-18 Identities = 45/58 (77%), Positives = 53/58 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNLR 376 Y LP +PLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVD+PEDV KIEA+M+ RN++ Sbjct: 364 YPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNIQ 421
>tr|Q9M4G3|Q9M4G3_MAIZE CMP-KDO synthetase OS=Zea mays GN=cks PE=2 SV=1 Length = 298
Score = 95.5 bits (236), Expect = 2e-18 Identities = 44/58 (75%), Positives = 53/58 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNLR 376 Y LP +PLQ+EEDLEQLKVLENGY+MKVIKVDH+AHGVD+PEDV KIEA+M+ RN++ Sbjct: 241 YPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRTRNIQ 298
>tr|B6TZC2|B6TZC2_MAIZE 3-deoxy-manno-octulosonate cytidylyltransferase OS=Zea mays PE=2 SV=1 Length = 298
Score = 95.5 bits (236), Expect = 2e-18 Identities = 44/58 (75%), Positives = 53/58 (91%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNLR 376 Y LP +PLQ+EEDLEQLKVLENGY+MKVIKVDH+AHGVD+PEDV KIEA+M+ RN++ Sbjct: 241 YPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRTRNIQ 298
>tr|B8AWQ3|B8AWQ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20971 PE=4 SV=1 Length = 297
Score = 95.1 bits (235), Expect = 2e-18 Identities = 45/58 (77%), Positives = 52/58 (89%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNLR 376 Y LP +PLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVD+PEDV KIEA+M RN++ Sbjct: 240 YPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMHARNIQ 297
>tr|A9NQZ3|A9NQZ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 290
Score = 93.6 bits (231), Expect = 6e-18 Identities = 45/57 (78%), Positives = 50/57 (87%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNL 379 Y L +PLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD P D++KIEA M+ERN+ Sbjct: 233 YPQLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDVPSDIAKIEAFMRERNI 289
>tr|A7R401|A7R401_VITVI Chromosome undetermined scaffold_596, whole genome shotgun sequence (Chromosome undetermined scaffold_1472, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00004067001 PE=4 SV=1 Length = 293
Score = 93.2 bits (230), Expect = 8e-18 Identities = 45/57 (78%), Positives = 51/57 (89%) Frame = -2
Query: 549 YVCLPSSPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSPEDVSKIEAVMKERNL 379 Y L +PLQLEEDLEQLKVLENGYKMKVIKVDH+AHGVD+PEDV KIEA+M+ +NL Sbjct: 236 YPELSPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIEALMRAQNL 292
|