BP917931
Clone id YMU001_000107_E04
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCACTGGCCGAGTACAAATACAGCCTTTGTTTGAGAGTAGAAAAATCTTTTGTCACCCA
CGTGCAGACACTCTTGCCAGGTACAAATACAGGCTTTGCTTGAGAATACAAAAATCTTTT
ATCGCCCGTCTGCAGGCATTCTCGCCATGTACAAATACAGGCTTTGCTTGAGAGTATACA
TGTGCAGACACTCTTCAAGGCAAAAATCCACAGGCATCCCTCCAGCAACAAACACTCTTC
ATTTTCATGTTTACATTCCTTTGATATCATGCCCTTCTCATGCTACCTTATTAACCTTAG
CTACAGCTAAATAGGAGAAAGAGGTTGGCACAAGCCTGCTCTTCCATGTAGGTCACCTTG
ATATTTAAATCATCCTTCTCAAAGGGCACCTATGCTCCTTGCTCTGTGCAACATGTATTA
TTTTGGTCACAAAAAAGACCATCTACATCTCCATTCTGTAATTACTG
■■Homology search results ■■ -
sp_hit_id P35832
Definition sp|P35832|PTP99_DROME Tyrosine-protein phosphatase 99A OS=Drosophila melanogaster
Align length 76
Score (bit) 30.0
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917931|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_E04.
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P35832|PTP99_DROME Tyrosine-protein phosphatase 99A OS=Drosop... 30 5.2

>sp|P35832|PTP99_DROME Tyrosine-protein phosphatase 99A
OS=Drosophila melanogaster GN=Ptp99A PE=2 SV=2
Length = 1301

Score = 30.0 bits (66), Expect = 5.2
Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +2

Query: 50 FVTHVQTLLPGTNTGFA*EYKNLLSPV------CRHSRHVQIQALLESIHVQTLFKAKIH 211
F HV +L + GF+ EY+ + + C HS+H + + +++ +++H
Sbjct: 461 FAKHVASLHADGDIGFSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVH 520

Query: 212 RHPSSNKHSSFSCLHS 259
HP+ + + +++
Sbjct: 521 LHPTPGQKKNLDYINA 536


tr_hit_id A8BM49
Definition tr|A8BM49|A8BM49_GIALA High cysteine membrane protein VSP-like OS=Giardia lamblia ATCC 50803
Align length 54
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917931|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_E04.
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8BM49|A8BM49_GIALA High cysteine membrane protein VSP-like O... 33 9.4

>tr|A8BM49|A8BM49_GIALA High cysteine membrane protein VSP-like
OS=Giardia lamblia ATCC 50803 GN=GL50803_115066 PE=4
SV=1
Length = 1167

Score = 32.7 bits (73), Expect = 9.4
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -3

Query: 189 VCTCILSSKACICTW-------RECLQTGDKRFLYSQA--KPVFVPGKSVCTWV 55
+CT + S+ C R CLQ G FLY + PGKSVCTWV
Sbjct: 634 ICTDVTSAHPSGCVTGVGSDSARSCLQCGAGYFLYMGGCYQENKEPGKSVCTWV 687