BP917932 [AcEST]

BP917932
Clone id	YMU001_000107_E05
Library	YMU01
Length	152
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000107_E05.
Accession	BP917932
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AGGGCGTGCTACAGAGAACGGCTTAACCAGTTCAGTTGGAAAAATTTCACGCTGATCGAG TTCATAATGAAGATACACGGCGGAGGACCAAGAGCACGCAATGGTATGACACAGACGGGG ATGCTGACTCTGAGACTGAGAGTTTCGGTTCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	A8MIM4
Definition	sp\|A8MIM4\|TRMB_ALKOO tRNA (guanine-N(7)-)-methyltransferase OS=Alkaliphilus oremlandii (strain OhILAs)
Align length	27
Score (bit)	30.8
E-value	2.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917932\|Adiantum capillus-veneris mRNA, clone: YMU001_000107_E05. (152 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|A8MIM4\|TRMB_ALKOO tRNA (guanine-N(7)-)-methyltransferase OS=A... 31 2.2 >sp\|A8MIM4\|TRMB_ALKOO tRNA (guanine-N(7)-)-methyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=trmB PE=3 SV=1 Length = 211 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 1 RACYRERLNQFSWKNFTLIEFIMKIHG 81 +A + L QF+ KNFTL+E I +HG Sbjct: 155 KALFEFSLEQFTQKNFTLVEVIEDLHG 181
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A0CBE4
Definition	tr\|A0CBE4\|A0CBE4_PARTE Chromosome undetermined scaffold_164, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length	42
Score (bit)	33.1
E-value	7.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917932\|Adiantum capillus-veneris mRNA, clone: YMU001_000107_E05. (152 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A0CBE4\|A0CBE4_PARTE Chromosome undetermined scaffold_164, who... 33 7.2 >tr\|A0CBE4\|A0CBE4_PARTE Chromosome undetermined scaffold_164, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00036894001 PE=4 SV=1 Length = 520 Score = 33.1 bits (74), Expect = 7.2 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 PVQLEKFHADRVHNEDTRRRTKSTQWYDTDGDADSETESFGS 152 P K H D VH EDT + D +G+ D ETE G+ Sbjct: 285 PKPAPKPHVDPVHQEDTTGEESGSHSTDNEGEDDEETEEQGT 326