BP917946
Clone id YMU001_000107_F11
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGGGCAAAGAAAAAAAGGGCCAAATGACTGCAGAGCATTGGAGGAGAAAAGTCAGTTTGT
TCGTGAAGGGGACACATGGCTCTTCAAAGATGGAGAGGTTCTTAAAAGGTTATCAGAAGC
AGATTTGTTATCAGCATCTACAGCCAGCAAAGCTGCCAATTCTTAATTGACGACTTCCTT
CGACATTGTCACATTTCAGCTCTTGTTAAACATGCATTTCTCCATGAGATTTCATCTATA
AAGGGATGTTGTCATTTCTCCACAATGTGGAGGTATATAGGTGTGCTGGGAGTTGCATTC
TTGGTGGGTGTAGTCAACCTATAGGTTTCAACTGAAAGAGAGCTCTCTTTTGGTAGAGAG
CTCGACACCAAAATGTTCATTCTGTATAAACATAATATTAGAGAATTTGGGATCTTCCCG
AGTCCCCATTTTACATGAGAGGCTAAGATTTTGACCATGTGGCTAAATTGTAACCCATAT
TTGAAATCAA
■■Homology search results ■■ -
sp_hit_id Q6LVG8
Definition sp|Q6LVG8|ASSY_PHOPR Argininosuccinate synthase OS=Photobacterium profundum
Align length 47
Score (bit) 30.0
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917946|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_F11.
(490 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6LVG8|ASSY_PHOPR Argininosuccinate synthase OS=Photobacteriu... 30 5.9

>sp|Q6LVG8|ASSY_PHOPR Argininosuccinate synthase OS=Photobacterium
profundum GN=argG PE=3 SV=1
Length = 404

Score = 30.0 bits (66), Expect = 5.9
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1

Query: 70 GHMALQRWRGS*KVIRSRFVISIYSQQSCQFLIDDFLRHCHISALVK 210
G + ++ ++G VI+ R + S+YS++ F DD H H ++
Sbjct: 340 GEVVVKLYKGQATVIQKRSMNSLYSEEFATFGEDDVYDHSHAGGFIR 386


tr_hit_id B4WS16
Definition tr|B4WS16|B4WS16_9SYNE SEC-C motif domain protein OS=Synechococcus sp. PCC 7335
Align length 28
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917946|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_F11.
(490 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4WS16|B4WS16_9SYNE SEC-C motif domain protein OS=Synechococc... 35 1.9
tr|Q6CI74|Q6CI74_YARLI YALI0A00979p OS=Yarrowia lipolytica GN=YA... 33 7.2
tr|Q5JKA2|Q5JKA2_ORYSJ KI domain interacting kinase 1-like prote... 33 9.3
tr|B8AA27|B8AA27_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.3
tr|A2ZU63|A2ZU63_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.3
tr|A2WR53|A2WR53_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.3

>tr|B4WS16|B4WS16_9SYNE SEC-C motif domain protein OS=Synechococcus
sp. PCC 7335 GN=S7335_1745 PE=4 SV=1
Length = 153

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2

Query: 20 PNDCRALEEKSQFVREGDTWLFKDGEVL 103
P++ L EKSQFVREG W + G++L
Sbjct: 97 PDELSQLHEKSQFVREGAQWFYTQGDLL 124


>tr|Q6CI74|Q6CI74_YARLI YALI0A00979p OS=Yarrowia lipolytica
GN=YALI0A00979g PE=4 SV=1
Length = 482

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3

Query: 297 ILGGCSQPIGFN*KRALFW*RARHQNVHS 383
ILGGCSQP+G + W RHQN+H+
Sbjct: 400 ILGGCSQPLG----AVVAWLMFRHQNLHT 424


>tr|Q5JKA2|Q5JKA2_ORYSJ KI domain interacting kinase 1-like protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0051H17.47 PE=4
SV=1
Length = 848

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2

Query: 296 HSW--WV*STYRFQLKESSLLVESSTPKCSFCINIIL 400
H+W W T+ QL ++SL++ES TP+ + CINI L
Sbjct: 748 HAWQMWKDETW-LQLVDTSLVIESHTPEMARCINIAL 783


>tr|B8AA27|B8AA27_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02340 PE=4 SV=1
Length = 667

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2

Query: 296 HSW--WV*STYRFQLKESSLLVESSTPKCSFCINIIL 400
H+W W T+ QL ++SL++ES TP+ + CINI L
Sbjct: 567 HAWQMWKDETW-LQLVDTSLVIESHTPEMARCINIAL 602


>tr|A2ZU63|A2ZU63_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_002085 PE=4 SV=1
Length = 638

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2

Query: 296 HSW--WV*STYRFQLKESSLLVESSTPKCSFCINIIL 400
H+W W T+ QL ++SL++ES TP+ + CINI L
Sbjct: 503 HAWQMWKDETW-LQLVDTSLVIESHTPEMARCINIAL 538


>tr|A2WR53|A2WR53_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02339 PE=4 SV=1
Length = 297

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2

Query: 296 HSW--WV*STYRFQLKESSLLVESSTPKCSFCINIIL 400
H+W W T+ QL ++SL++ES TP+ + CINI L
Sbjct: 162 HAWQMWKDETW-LQLVDTSLVIESHTPEMARCINIAL 197