BP917947 |
Clone id |
YMU001_000107_F12 |
Library |
YMU01 |
Length |
348 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000107_F12. |
Accession |
BP917947 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL667Contig1 |
Sequence |
ACAAAGCCCCTGAGAGTGCAACCTCAAGTTGCTCTAAAGCCTTTGCTGACATTGCCTATT CTTTCAAAGATGAGGAAGAGGAAGAGCAGGAGAAGCCAAAACCAAAGGTTCCATCGAGTA ATGGAGCTGAGGCCCAGTACCTCAAGGCAACCTTGCGGTCTGACAACCAGGAGATGACCA AGGAAGAAGTGCGCAGGCAGCACCAGGCAGAGTTGGCACGACAAAAGAATGAGGAGACAG CAAGGAGGCTGGCTTCTGGGGGTTTGGGCCAAGGAGATGGGCAGGGTGTTGTCAGGACAA CTGGAGATTTGGTTGCTTATCGAAATGTGGATGATATTCCATTCTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H6B1 |
Definition |
sp|Q8H6B1|SPT16_MAIZE FACT complex subunit SPT16 OS=Zea mays |
Align length |
111 |
Score (bit) |
106.0 |
E-value |
4.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PRK6 |
Definition |
tr|A7PRK6|A7PRK6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
113 |
Score (bit) |
119.0 |
E-value |
6.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917947|Adiantum capillus-veneris mRNA, clone: YMU001_000107_F12. (348 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PRK6|A7PRK6_VITVI Chromosome chr14 scaffold_27, whole genom... 119 6e-26 tr|A5AQP4|A5AQP4_VITVI Putative uncharacterized protein OS=Vitis... 119 6e-26 tr|A9TYN6|A9TYN6_PHYPA FACT complex subunit OS=Physcomitrella pa... 115 1e-24 tr|B2ZGK9|B2ZGK9_TRITU Putative uncharacterized protein OS=Triti... 107 3e-22 tr|B2ZGK7|B2ZGK7_AEGTA Putative uncharacterized protein OS=Aegil... 107 3e-22 tr|Q0JE60|Q0JE60_ORYSJ Os04g0321600 protein OS=Oryza sativa subs... 103 4e-21 tr|A3ASB4|A3ASB4_ORYSJ Putative uncharacterized protein OS=Oryza... 103 4e-21 tr|A7PRK5|A7PRK5_VITVI Chromosome chr14 scaffold_27, whole genom... 102 7e-21 tr|A5AQP3|A5AQP3_VITVI Putative uncharacterized protein OS=Vitis... 102 7e-21 tr|A3BSY5|A3BSY5_ORYSJ Putative uncharacterized protein OS=Oryza... 71 3e-11 tr|A8JHE3|A8JHE3_CHLRE Global transcription factor (Fragment) OS... 44 0.003 tr|A5A4L9|A5A4L9_DANRE FACT complex large subunit (Suppressor of... 42 0.020 tr|Q4T7I5|Q4T7I5_TETNG Chromosome undetermined SCAF8089, whole g... 40 0.075 tr|B7ZQW8|B7ZQW8_XENLA SUPT16H protein OS=Xenopus laevis GN=SUPT... 39 0.099 tr|A7SV15|A7SV15_NEMVE Predicted protein OS=Nematostella vectens... 39 0.13 tr|Q5R7Q5|Q5R7Q5_PONAB Putative uncharacterized protein DKFZp469... 39 0.17 tr|B6P6B4|B6P6B4_BRAFL Putative uncharacterized protein OS=Branc... 38 0.22 tr|B6NUD2|B6NUD2_BRAFL Putative uncharacterized protein (Fragmen... 38 0.22 tr|B4LDE4|B4LDE4_DROVI GJ12941 OS=Drosophila virilis GN=GJ12941 ... 36 0.83 tr|B4L9P2|B4L9P2_DROMO GI16689 OS=Drosophila mojavensis GN=GI166... 36 0.83 tr|B3M787|B3M787_DROAN GF24952 OS=Drosophila ananassae GN=GF2495... 36 0.83 tr|B4N4H5|B4N4H5_DROWI GK10599 OS=Drosophila willistoni GN=GK105... 36 1.1 tr|B4IZY3|B4IZY3_DROGR GH15037 OS=Drosophila grimshawi GN=GH1503... 36 1.1 tr|A8SS91|A8SS91_9FIRM Putative uncharacterized protein OS=Copro... 35 1.4 tr|B4PDV9|B4PDV9_DROYA GE20905 OS=Drosophila yakuba GN=GE20905 P... 35 1.4 tr|B3NEX2|B3NEX2_DROER GG14551 OS=Drosophila erecta GN=GG14551 P... 35 1.4 tr|A7T6Q5|A7T6Q5_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 1.4 tr|B4QN01|B4QN01_DROSI GD13429 OS=Drosophila simulans GN=GD13429... 35 1.9 tr|B4HW22|B4HW22_DROSE GM14159 OS=Drosophila sechellia GN=GM1415... 35 1.9 tr|Q7PTA1|Q7PTA1_ANOGA AGAP006817-PA OS=Anopheles gambiae GN=AGA... 35 2.4
>tr|A7PRK6|A7PRK6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022541001 PE=4 SV=1 Length = 979
Score = 119 bits (299), Expect = 6e-26 Identities = 63/113 (55%), Positives = 73/113 (64%) Frame = +3
Query: 3 KAPESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTK 182 K PE TS SKA D+AYSF + +NG EA KATLRSDNQEM+K Sbjct: 437 KGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEMSK 496
Query: 183 EEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIP 341 EE+RRQHQAELARQKNEETARRLA V+ TGDL+AY+NV+D+P Sbjct: 497 EELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVNDLP 549
>tr|A5AQP4|A5AQP4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017318 PE=4 SV=1 Length = 1019
Score = 119 bits (299), Expect = 6e-26 Identities = 63/113 (55%), Positives = 73/113 (64%) Frame = +3
Query: 3 KAPESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTK 182 K PE TS SKA D+AYSF + +NG EA KATLRSDNQEM+K Sbjct: 437 KGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEMSK 496
Query: 183 EEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIP 341 EE+RRQHQAELARQKNEETARRLA V+ TGDL+AY+NV+D+P Sbjct: 497 EELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVNDLP 549
>tr|A9TYN6|A9TYN6_PHYPA FACT complex subunit OS=Physcomitrella patens subsp. patens GN=GTC1501 PE=4 SV=1 Length = 1065
Score = 115 bits (288), Expect = 1e-24 Identities = 66/115 (57%), Positives = 73/115 (63%), Gaps = 4/115 (3%) Frame = +3
Query: 9 PESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXX---SSNGAEAQYLK-ATLRSDNQEM 176 PE T CSK + DIAYSFKD SNG+ ++ ATLRSDNQEM Sbjct: 428 PEVPTLKCSKTYTDIAYSFKDDEEDEEVKVEAKPKVKSESNGSNEPAVRMATLRSDNQEM 487
Query: 177 TKEEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIP 341 TKEE RRQHQAELARQKNEETARRLAS +TTGD++AYRNVDDIP Sbjct: 488 TKEEQRRQHQAELARQKNEETARRLASGGLGSGDGQGPNKTTGDIIAYRNVDDIP 542
>tr|B2ZGK9|B2ZGK9_TRITU Putative uncharacterized protein OS=Triticum turgidum subsp. durum PE=4 SV=1 Length = 1085
Score = 107 bits (267), Expect = 3e-22 Identities = 62/115 (53%), Positives = 73/115 (63%) Frame = +3
Query: 3 KAPESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTK 182 KA E T+ CSKA D+AYSF + NG EA KATLRSDNQEM+K Sbjct: 428 KAAEILTN-CSKAVKDVAYSFNEDEEEVPKPKRAKV-EPNGVEALPSKATLRSDNQEMSK 485
Query: 183 EEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIPFS 347 EE+RRQHQAELARQKNEETARRLA R + +LVAY+NV+D+P+S Sbjct: 486 EELRRQHQAELARQKNEETARRLAGGGSGNGDGRGPSRNSNELVAYKNVNDVPYS 540
>tr|B2ZGK7|B2ZGK7_AEGTA Putative uncharacterized protein OS=Aegilops tauschii PE=4 SV=1 Length = 1085
Score = 107 bits (267), Expect = 3e-22 Identities = 62/115 (53%), Positives = 73/115 (63%) Frame = +3
Query: 3 KAPESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTK 182 KA E T+ CSKA D+AYSF + NG EA KATLRSDNQEM+K Sbjct: 428 KAAEILTN-CSKAVKDVAYSFNEDEEEVPKPKRAKV-EPNGVEALPSKATLRSDNQEMSK 485
Query: 183 EEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIPFS 347 EE+RRQHQAELARQKNEETARRLA R + +LVAY+NV+D+P+S Sbjct: 486 EELRRQHQAELARQKNEETARRLAGGGSGNGDGRGPSRNSNELVAYKNVNDVPYS 540
>tr|Q0JE60|Q0JE60_ORYSJ Os04g0321600 protein OS=Oryza sativa subsp. japonica GN=Os04g0321600 PE=2 SV=1 Length = 1056
Score = 103 bits (257), Expect = 4e-21 Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Frame = +3
Query: 12 ESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEA-QYLKATLRSDNQEMTKEE 188 E+ T+SCSK D+AYSF D N EA KATLRSDNQEM+KEE Sbjct: 430 ENLTASCSKLVKDVAYSFNDEDEVLPVKKVEV----NAKEALPPTKATLRSDNQEMSKEE 485
Query: 189 VRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIPFS 347 +RRQHQAELARQKNEETARRLA R++ +LVAY+NV+D+P++ Sbjct: 486 LRRQHQAELARQKNEETARRLAGVGSGSGDGRGPSRSSNELVAYKNVNDVPYA 538
>tr|A3ASB4|A3ASB4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_013686 PE=4 SV=1 Length = 1037
Score = 103 bits (257), Expect = 4e-21 Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Frame = +3
Query: 12 ESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEA-QYLKATLRSDNQEMTKEE 188 E+ T+SCSK D+AYSF D N EA KATLRSDNQEM+KEE Sbjct: 411 ENLTASCSKLVKDVAYSFNDEDEVLPVKKVEV----NAKEALPPTKATLRSDNQEMSKEE 466
Query: 189 VRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIPFS 347 +RRQHQAELARQKNEETARRLA R++ +LVAY+NV+D+P++ Sbjct: 467 LRRQHQAELARQKNEETARRLAGVGSGSGDGRGPSRSSNELVAYKNVNDVPYA 519
>tr|A7PRK5|A7PRK5_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022540001 PE=4 SV=1 Length = 1045
Score = 102 bits (255), Expect = 7e-21 Identities = 55/111 (49%), Positives = 67/111 (60%) Frame = +3
Query: 9 PESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTKEE 188 PE TS SKA DIAYSF + + + K TLRSDNQE++KEE Sbjct: 434 PEVVTSLSSKAVKDIAYSFNEEGDDNEGEERPKAKAESHGPETLSKTTLRSDNQEISKEE 493
Query: 189 VRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIP 341 +RRQHQAELARQKNEETARRLA +T+ DL+AY+NV+D+P Sbjct: 494 LRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLIAYKNVNDVP 544
>tr|A5AQP3|A5AQP3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017317 PE=4 SV=1 Length = 1083
Score = 102 bits (255), Expect = 7e-21 Identities = 55/111 (49%), Positives = 67/111 (60%) Frame = +3
Query: 9 PESATSSCSKAFADIAYSFKDXXXXXXXXXXXXXXSSNGAEAQYLKATLRSDNQEMTKEE 188 PE TS SKA DIAYSF + + + K TLRSDNQE++KEE Sbjct: 434 PEVVTSLSSKAVKDIAYSFNEEGDDNEGEERPKAKAESHGPETLSKTTLRSDNQEISKEE 493
Query: 189 VRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIP 341 +RRQHQAELARQKNEETARRLA +T+ DL+AY+NV+D+P Sbjct: 494 LRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLIAYKNVNDVP 544
>tr|A3BSY5|A3BSY5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026157 PE=4 SV=1 Length = 623
Score = 70.9 bits (172), Expect = 3e-11 Identities = 34/58 (58%), Positives = 44/58 (75%) Frame = +3
Query: 174 MTKEEVRRQHQAELARQKNEETARRLASXXXXXXXXXXVVRTTGDLVAYRNVDDIPFS 347 M+KEE+RRQHQAELARQKNEETARRLA R++ +LVAY+NV+D+P++ Sbjct: 1 MSKEELRRQHQAELARQKNEETARRLAGVGSGSGDGRGPSRSSNELVAYKNVNDVPYA 58
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