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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917953
Clone id YMU001_000107_G09
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTAAAGACAAGGCCTTTAAGAAAAGAATCAATTTGTTAGAAAGACCCTGAAGGATCCAT
GAGCAAGATACAACTTGCTCGTGAGCAGAGCCTCTGGGTGTAAACCTAGCAGCAACCCAA
GCAATGATCGACCCATCAAATATATATCGTTCTATGCAACATACAAGAGATGTTTAGGTA
CCCAATGACCTTAAAAAAAGGATCAATGGAAGATCTACGAAGATATACAATCACACTCAA
TTCACATATGGACCTTGCTCTTCTTATCCCTAGCATACCCACACCCTACAAGATATTAGC
AAAATCATTGCATACACAAGCTCTTCCATATCAGAAAAATTGAAGCCAATGTTGTCCTGC
TCTCCATAATCAATTGATGAATCCCGCCAGGATCGGGATTCTGTAAGCTCGGCAAGCCCT
CGGCTTACATCTTTTACTTCATTCCCTTGGACAACAATACCAGGCTTTATCACCACCAAA
AAATTTAGACAATTTGCTATTGCTGGCAATCAGCTCACTCAGACTTCACCCTCCTTTCCG
AATTCATCATAATCGACCGCTGGCTTCTTCTTCTCG
■■Homology search results ■■ -
sp_hit_id Q10093
Definition sp|Q10093|YAOE_SCHPO Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe
Align length 60
Score (bit) 32.7
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917953|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_G09.
         (576 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10093|YAOE_SCHPO Uncharacterized protein C11D3.14c OS=Schizo...    33   1.3  
sp|A7TQN2|SQS1_VANPO Protein SQS1 OS=Vanderwaltozyma polyspora (...    31   5.1  
sp|Q5T1R4|ZEP3_HUMAN Transcription factor HIVEP3 OS=Homo sapiens...    30   6.6  
sp|Q49W09|SSRP_STAS1 SsrA-binding protein OS=Staphylococcus sapr...    30   6.6  
sp|Q8NXL2|SSRP_STAAW SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|A8Z1A9|SSRP_STAAT SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q6GB49|SSRP_STAAS SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q6GIK9|SSRP_STAAR SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|P66863|SSRP_STAAN SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|P66862|SSRP_STAAM SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|A6QF90|SSRP_STAAE SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q5HHN6|SSRP_STAAC SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q2YWK9|SSRP_STAAB SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|A5IQY5|SSRP_STAA9 SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q2G023|SSRP_STAA8 SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q2FIL2|SSRP_STAA3 SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|A6TZR0|SSRP_STAA2 SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|A7WZT9|SSRP_STAA1 SsrA-binding protein OS=Staphylococcus aure...    30   6.6  
sp|Q5JRM2|YX016_HUMAN Uncharacterized protein LOC347487 OS=Homo ...    30   8.7  
sp|Q18726|CIA30_CAEEL Probable complex I intermediate-associated...    30   8.7  
sp|Q61FQ3|CIA30_CAEBR Probable complex I intermediate-associated...    30   8.7  

>sp|Q10093|YAOE_SCHPO Uncharacterized protein C11D3.14c
           OS=Schizosaccharomyces pombe GN=SPAC11D3.14c PE=2 SV=1
          Length = 1260

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +1

Query: 187 DLKKRINGRSTKIYNHTQFTYGPCSSYP*HTHTLQDISKIIAYTSSSISEKLKPMLSCSP 366
           DLK+  N     I      +Y    +YP H   ++ I+K I +T  S+S KL PM+   P
Sbjct: 174 DLKELYNEGFRSISVSLMHSY----TYPLHEEVVEKIAKRIGFTDISLSSKLTPMVKIVP 229


>sp|A7TQN2|SQS1_VANPO Protein SQS1 OS=Vanderwaltozyma polyspora
           (strain ATCC 22028 / DSM 70294) GN=SQS1 PE=3 SV=1
          Length = 767

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 419 GLAELTESRSWRDSSIDYGEQDNIGFNFSDME 324
           G    +   +WR+SSI +G+ D   FNF+D++
Sbjct: 43  GFGRSSNDDNWRNSSIPFGDGDLGNFNFADID 74


>sp|Q5T1R4|ZEP3_HUMAN Transcription factor HIVEP3 OS=Homo sapiens
            GN=HIVEP3 PE=1 SV=1
          Length = 2406

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 248  MDLALLIPSIPTPYKILAKSLHTQALPYQK 337
            +D  +L P  P P+K+L++S  T A P+QK
Sbjct: 2108 LDPRVLFPPAPLPHKLLSRSPETCASPWQK 2137


>sp|Q49W09|SSRP_STAS1 SsrA-binding protein OS=Staphylococcus
           saprophyticus subsp. saprophyticus (strain ATCC 15305 /
           DSM 20229) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|Q8NXL2|SSRP_STAAW SsrA-binding protein OS=Staphylococcus aureus
           (strain MW2) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|A8Z1A9|SSRP_STAAT SsrA-binding protein OS=Staphylococcus aureus
           (strain USA300 / TCH1516) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|Q6GB49|SSRP_STAAS SsrA-binding protein OS=Staphylococcus aureus
           (strain MSSA476) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|Q6GIK9|SSRP_STAAR SsrA-binding protein OS=Staphylococcus aureus
           (strain MRSA252) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|P66863|SSRP_STAAN SsrA-binding protein OS=Staphylococcus aureus
           (strain N315) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50


>sp|P66862|SSRP_STAAM SsrA-binding protein OS=Staphylococcus aureus
           (strain Mu50 / ATCC 700699) GN=smpB PE=3 SV=1
          Length = 154

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 470 IKPGIVVQGNEVKDVSRGLAELTES 396
           I+ GIV+QG E+K + RG A L +S
Sbjct: 26  IEAGIVLQGTEIKSIRRGSANLKDS 50
tr_hit_id A4HMM0
Definition tr|A4HMM0|A4HMM0_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis
Align length 43
Score (bit) 34.3
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917953|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_G09.
         (576 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4HMM0|A4HMM0_LEIBR Putative uncharacterized protein OS=Leish...    34   5.0  
tr|A4IB98|A4IB98_LEIIN Putative uncharacterized protein OS=Leish...    33   8.6  

>tr|A4HMM0|A4HMM0_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM34_V2.1910 PE=4 SV=1
          Length = 925

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 161 IQEMFRYPMTLKKGSMEDLRRYTITLNSHMDLALLIP-SIPTP 286
           I+E  R  ++L KG   DLR YT+ L   + LA+ +P S+PTP
Sbjct: 707 IREGSRLGVSLVKGDQMDLRYYTLPLLGSLYLAVCVPQSVPTP 749


>tr|A4IB98|A4IB98_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ35.2150 PE=4 SV=1
          Length = 402

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 161 IQEMFRYPMTLKKGSMEDLRRYTITLNSHMDLALLI-PSIPTPYKILAKS 307
           I+E  +  ++L KG   DLR YT+ L   + LA+   P  PTP K++A S
Sbjct: 185 IREGSQLGVSLVKGDQVDLRYYTLPLLGSLYLAVCAPPGSPTPAKVVASS 234