BP917957
Clone id YMU001_000107_H03
Library
Length 302
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGAAGATTCGCGGCCGCAGGAATTTTGTTTTTTTTGGGCAATCAGGGATCAAGTGAGT
GATGCCACACTCAAGACAATAGGCATTTACTTCCATGATCTCCGAATGAGGACATTGTTT
GACCAAGCGGTTGTCACAACTTTTGTGACAATCTGTCTCTGGTTGAGGAAATTCTTATAG
CATTTCCTCTTGGCTATAAACAAGCTTTGACCTAGATAAGCCGCTATTTGCAATGAATCG
CAATGTCCTTTCGTCTATTTCATACCTTCTTTCTTTCTACTGAAACCCAAGAGGTGGAGG
TT
■■Homology search results ■■ -
sp_hit_id P36627
Definition sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe
Align length 45
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917957|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H03.
(265 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 30 2.9
sp|Q6BS98|ALG1_DEBHA Chitobiosyldiphosphodolichol beta-mannosylt... 29 8.5

>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1
Length = 179

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -3

Query: 131 PQPETDCHK-SCDNRLVKQCPHSEIMEVNAYCLECG-ITHLIPDC 3
PQ E C+ LV+ CP S A C +CG + H+ DC
Sbjct: 54 PQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDC 98


>sp|Q6BS98|ALG1_DEBHA Chitobiosyldiphosphodolichol
beta-mannosyltransferase OS=Debaryomyces hansenii
GN=ALG1 PE=3 SV=2
Length = 472

Score = 28.9 bits (63), Expect = 8.5
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = -1

Query: 118 QIVTKVVTTAWSNNVLIRRSW---K*MPIVLSVASLT*SL 8
Q + KV +S+NV+I+ +W + P++LSVA L+ SL
Sbjct: 329 QFLQKVKQLNFSDNVIIKNAWLSSEDYPLILSVADLSISL 368


tr_hit_id Q236R4
Definition tr|Q236R4|Q236R4_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 31
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917957|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H03.
(265 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q236R4|Q236R4_TETTH Putative uncharacterized protein OS=Tetra... 34 4.2

>tr|Q236R4|Q236R4_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00085340 PE=4
SV=1
Length = 2673

Score = 33.9 bits (76), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3

Query: 95 NRLVKQCPHSEIMEVNAYCLECGITHLIPDC 3
+R ++QC + I+ N+YCL+C + ++PDC
Sbjct: 1078 DRQLQQCFSNCILCNNSYCLQCAVDRVLPDC 1108