BP917960
Clone id YMU001_000107_H07
Library
Length 258
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000107_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGTGACAACCCAAAATGTCAGGGTCTCAAAAAGGCTGTCGAATTTGACATTCAGCTTGAA
TCTGAGAAGTGTGTAAAATTGGCTCCATCTGCCACAAGCTTTACACAAGCAGTCCCGTGG
AAGGCGAGTATTGAGCTTGGCGAGGATCACAAGGAGCTTGAAGCGGAGCTGAAGCGGATG
GCGCCACCCAATGGCAGGGCAGTTCTTGTATTTAGATCTCCATGCGGATGCCCGATTGCT
CGCATGGAGGTATGGGGC
■■Homology search results ■■ -
sp_hit_id P0C8Q9
Definition sp|P0C8Q9|Y5902_ARATH Uncharacterized protein At5g19025, chloroplastic OS=Arabidopsis thaliana
Align length 86
Score (bit) 107.0
E-value 2.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917960|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H07.
(258 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P0C8Q9|Y5902_ARATH Uncharacterized protein At5g19025, chlorop... 107 2e-23
sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated ... 31 2.2
sp|Q4R7Q1|NSUN7_MACFA Putative methyltransferase NSUN7 OS=Macaca... 30 2.8
sp|Q8NE18|NSUN7_HUMAN Putative methyltransferase NSUN7 OS=Homo s... 29 6.3
sp|Q00657|CSPG4_RAT Chondroitin sulfate proteoglycan 4 OS=Rattus... 29 6.3
sp|Q24025|SOG_DROME Dorsal-ventral patterning protein Sog OS=Dro... 29 8.2
sp|Q5R9R9|HEM1_PONAB 5-aminolevulinate synthase, nonspecific, mi... 29 8.2
sp|P07997|HEM1_CHICK 5-aminolevulinate synthase, nonspecific, mi... 29 8.2
sp|P20130|V70K_OYMV 66 kDa protein OS=Ononis yellow mosaic virus... 29 8.2
sp|P90518|GSP_CRIFA Glutathionylspermidine synthase OS=Crithidia... 29 8.2

>sp|P0C8Q9|Y5902_ARATH Uncharacterized protein At5g19025,
chloroplastic OS=Arabidopsis thaliana GN=At5g19025 PE=2
SV=1
Length = 321

Score = 107 bits (267), Expect = 2e-23
Identities = 48/86 (55%), Positives = 64/86 (74%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRM 180
C NPKC+G+KKA+EFD+QL++E+CVK + +PWK E D++ L AEL++M
Sbjct: 153 CRNPKCKGMKKAMEFDLQLQTEECVK--SGSVKEIDRLPWKGGSESNPDYECLRAELRKM 210

Query: 181 APPNGRAVLVFRSPCGCPIARMEVWG 258
AP NGRAVL+FRS CGCPIA++E WG
Sbjct: 211 APVNGRAVLIFRSKCGCPIAKLEGWG 236


>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated
cyclic nucleotide-gated channel 1 OS=Rattus norvegicus
GN=Hcn1 PE=2 SV=1
Length = 910

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3

Query: 199 PCHWVAPSASAPLQAPCDPRQAQYSPSTGLLV*SLWQMEPILHTSQIQ 56
PC + S P+Q+P R Y+ T + + Q +P L SQ+Q
Sbjct: 685 PCSYTTAVCSPPIQSPLATRTFHYASPTASQLSLMQQPQPQLQQSQVQ 732


>sp|Q4R7Q1|NSUN7_MACFA Putative methyltransferase NSUN7 OS=Macaca
fascicularis GN=NSUN7 PE=2 SV=1
Length = 702

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3

Query: 253 IPPCEQSGIRMEI*IQELPCHWVAPSASAPLQAP 152
+P GIR + Q L CHWVAP P P
Sbjct: 642 MPFSSPQGIRSRMPTQHLYCHWVAPKPLVPTCLP 675


>sp|Q8NE18|NSUN7_HUMAN Putative methyltransferase NSUN7 OS=Homo
sapiens GN=NSUN7 PE=2 SV=3
Length = 718

Score = 29.3 bits (64), Expect = 6.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3

Query: 253 IPPCEQSGIRMEI*IQELPCHWVAPSASAPLQAP 152
+P GIR + Q L C WVAP A P P
Sbjct: 658 MPFSSPQGIRSRMPTQHLYCRWVAPKALVPTCLP 691


>sp|Q00657|CSPG4_RAT Chondroitin sulfate proteoglycan 4 OS=Rattus
norvegicus GN=Cspg4 PE=1 SV=2
Length = 2326

Score = 29.3 bits (64), Expect = 6.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2

Query: 8 TQNVRVSKR-LSNLTFSLNLRSV*NWLHLPQALHKQSRGRRVLSLARITRSLKRS*SGWR 184
T V+V + LSNL+F + ++ W+ + LH Q+ + L+ A + SL+ G
Sbjct: 761 TLEVQVGQETLSNLSFPVTIQRATVWMLQLEPLHTQNPHQETLTSAHLEASLEEEGEGGP 820

Query: 185 HP 190
+P
Sbjct: 821 YP 822


>sp|Q24025|SOG_DROME Dorsal-ventral patterning protein Sog
OS=Drosophila melanogaster GN=sog PE=1 SV=1
Length = 1038

Score = 28.9 bits (63), Expect = 8.2
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 13/97 (13%)
Frame = +1

Query: 1 CDNPKCQGLK-KAVEFDIQLESEKCVKLAPS------------ATSFTQAVPWKASIELG 141
C+ KC LK K+ E +Q + E C P AT+ T + + LG
Sbjct: 776 CEVIKCPALKCKSTEQLLQRDGECCPSCVPKKEAADYSAQSSPATNATDLLQQRRGCRLG 835

Query: 142 EDHKELEAELKRMAPPNGRAVLVFRSPCGCPIARMEV 252
E A PPNG + C C +E+
Sbjct: 836 EQFHPAGASWHPFLPPNGFDTC---TTCSCDPLTLEI 869


>sp|Q5R9R9|HEM1_PONAB 5-aminolevulinate synthase, nonspecific,
mitochondrial OS=Pongo abelii GN=ALAS1 PE=2 SV=1
Length = 640

Score = 28.9 bits (63), Expect = 8.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1

Query: 61 SEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRMAPPNG 195
+ KC LA +V KAS+EL ED +E+ A K +A +G
Sbjct: 105 ASKCPFLAAQMNQRGSSVFCKASLELQEDVQEMNAVRKEVAETSG 149


>sp|P07997|HEM1_CHICK 5-aminolevulinate synthase, nonspecific,
mitochondrial OS=Gallus gallus GN=ALAS1 PE=2 SV=2
Length = 635

Score = 28.9 bits (63), Expect = 8.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1

Query: 49 IQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELK 174
+Q + KC LA + V KAS+EL ED KE++ + K
Sbjct: 94 VQSSATKCPFLAAQMNHKSSNVFCKASLELQEDVKEMQVDRK 135


>sp|P20130|V70K_OYMV 66 kDa protein OS=Ononis yellow mosaic virus
PE=3 SV=1
Length = 597

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3

Query: 199 PCHWVAPSASAPLQAPCDPRQAQYSP 122
P H V S+ APLQ+ C PR+ + P
Sbjct: 158 PLHSVPLSSEAPLQSSCSPRKLLHRP 183


>sp|P90518|GSP_CRIFA Glutathionylspermidine synthase OS=Crithidia
fasciculata GN=GSP PE=1 SV=2
Length = 719

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3

Query: 241 EQSGIRMEI*IQELPCHWV--APSASAPLQAPCD-PRQAQYSPSTGLLV*SLWQMEPILH 71
EQ+G R ++ ++ + + PS +APL PCD P L+V W + +LH
Sbjct: 445 EQAGFRTKLCVKLVNFRYRDGPPSNAAPLATPCDHPTIVDGEDEEVLMVWKTWSWDTVLH 504


tr_hit_id A7P0C0
Definition tr|A7P0C0|A7P0C0_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 86
Score (bit) 122.0
E-value 1.0e-26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917960|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H07.
(258 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P0C0|A7P0C0_VITVI Chromosome chr6 scaffold_3, whole genome ... 122 1e-26
tr|A5B768|A5B768_VITVI Putative uncharacterized protein OS=Vitis... 122 1e-26
tr|Q5N757|Q5N757_ORYSJ Pentatricopeptide (PPR) repeat-containing... 121 2e-26
tr|A2ZYY4|A2ZYY4_ORYSJ Putative uncharacterized protein OS=Oryza... 121 2e-26
tr|A2WWB6|A2WWB6_ORYSI Putative uncharacterized protein OS=Oryza... 121 2e-26
tr|B6SQQ9|B6SQQ9_MAIZE Putative uncharacterized protein OS=Zea m... 117 3e-25
tr|Q9M8K0|Q9M8K0_ARATH F28L1.12 protein (At3g06180) OS=Arabidops... 114 2e-24
tr|Q6AVN3|Q6AVN3_ORYSJ Os05g0488500 protein OS=Oryza sativa subs... 112 9e-24
tr|B8AZH1|B8AZH1_ORYSI Putative uncharacterized protein OS=Oryza... 112 9e-24
tr|A7NWE9|A7NWE9_VITVI Chromosome chr5 scaffold_2, whole genome ... 110 5e-23
tr|A5ADW3|A5ADW3_VITVI Putative uncharacterized protein OS=Vitis... 110 5e-23
tr|A9PHB0|A9PHB0_POPTR Putative uncharacterized protein OS=Popul... 103 6e-21
tr|A7PMX8|A7PMX8_VITVI Chromosome chr14 scaffold_21, whole genom... 100 6e-20
tr|Q9LXF6|Q9LXF6_ARATH Putative uncharacterized protein F8M21_15... 97 3e-19
tr|Q8VYH4|Q8VYH4_ARATH AT5g15260/F8M21_150 (Putative uncharacter... 97 3e-19
tr|Q60ER4|Q60ER4_ORYSJ Putative uncharacterized protein OJ1764_D... 97 3e-19
tr|Q0DIF5|Q0DIF5_ORYSJ Os05g0393200 protein OS=Oryza sativa subs... 97 3e-19
tr|B8AY02|B8AY02_ORYSI Putative uncharacterized protein OS=Oryza... 97 3e-19
tr|A3B3R0|A3B3R0_ORYSJ Putative uncharacterized protein OS=Oryza... 97 3e-19
tr|B6U6F0|B6U6F0_MAIZE Putative uncharacterized protein OS=Zea m... 97 4e-19
tr|Q6NLZ8|Q6NLZ8_ARATH At3g01170 (Putative uncharacterized prote... 93 6e-18
tr|A2Q236|A2Q236_MEDTR Putative uncharacterized protein OS=Medic... 80 5e-14
tr|Q9MAC7|Q9MAC7_ARATH T4P13.14 protein OS=Arabidopsis thaliana ... 80 7e-14
tr|A3B5B4|A3B5B4_ORYSJ Putative uncharacterized protein OS=Oryza... 40 4e-04
tr|A6U8C9|A6U8C9_SINMW Nitroreductase OS=Sinorhizobium medicae (... 35 2.4

>tr|A7P0C0|A7P0C0_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024847001
PE=4 SV=1
Length = 223

Score = 122 bits (305), Expect = 1e-26
Identities = 58/86 (67%), Positives = 65/86 (75%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRM 180
C NP C+GL+KAVEFDIQLESE+CVK P + +ELGEDHKELEAELKRM
Sbjct: 132 CGNPYCKGLRKAVEFDIQLESEECVKYLPPVPKNAYGLQ---PLELGEDHKELEAELKRM 188

Query: 181 APPNGRAVLVFRSPCGCPIARMEVWG 258
AP NGR VL+FR+PCGCP RMEVWG
Sbjct: 189 APLNGRTVLIFRAPCGCPAGRMEVWG 214


>tr|A5B768|A5B768_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_037529 PE=4 SV=1
Length = 228

Score = 122 bits (305), Expect = 1e-26
Identities = 58/86 (67%), Positives = 65/86 (75%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRM 180
C NP C+GL+KAVEFDIQLESE+CVK P + +ELGEDHKELEAELKRM
Sbjct: 137 CGNPYCKGLRKAVEFDIQLESEECVKYLPPVPKNAYGLQ---PLELGEDHKELEAELKRM 193

Query: 181 APPNGRAVLVFRSPCGCPIARMEVWG 258
AP NGR VL+FR+PCGCP RMEVWG
Sbjct: 194 APLNGRTVLIFRAPCGCPAGRMEVWG 219


>tr|Q5N757|Q5N757_ORYSJ Pentatricopeptide (PPR) repeat-containing
protein-like OS=Oryza sativa subsp. japonica
GN=OSJNBa0085D07.36 PE=4 SV=1
Length = 218

Score = 121 bits (303), Expect = 2e-26
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 2/88 (2%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK--LAPSATSFTQAVPWKASIELGEDHKELEAELK 174
C P+C+GLKKAVEFDIQLE+E+CV+ AP+A S A +ELG+ H+ELEAEL+
Sbjct: 122 CGKPRCRGLKKAVEFDIQLETEECVRGHPAPAARSALLAAAGAHPVELGDAHRELEAELR 181

Query: 175 RMAPPNGRAVLVFRSPCGCPIARMEVWG 258
+MAPPNGR VL+FRSPCGCP RMEVWG
Sbjct: 182 KMAPPNGRTVLIFRSPCGCPKGRMEVWG 209


>tr|A2ZYY4|A2ZYY4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003756 PE=4 SV=1
Length = 167

Score = 121 bits (303), Expect = 2e-26
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 2/88 (2%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK--LAPSATSFTQAVPWKASIELGEDHKELEAELK 174
C P+C+GLKKAVEFDIQLE+E+CV+ AP+A S A +ELG+ H+ELEAEL+
Sbjct: 71 CGKPRCRGLKKAVEFDIQLETEECVRGHPAPAARSALLAAAGAHPVELGDAHRELEAELR 130

Query: 175 RMAPPNGRAVLVFRSPCGCPIARMEVWG 258
+MAPPNGR VL+FRSPCGCP RMEVWG
Sbjct: 131 KMAPPNGRTVLIFRSPCGCPKGRMEVWG 158


>tr|A2WWB6|A2WWB6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04197 PE=4 SV=1
Length = 167

Score = 121 bits (303), Expect = 2e-26
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 2/88 (2%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK--LAPSATSFTQAVPWKASIELGEDHKELEAELK 174
C P+C+GLKKAVEFDIQLE+E+CV+ AP+A S A +ELG+ H+ELEAEL+
Sbjct: 71 CGKPRCRGLKKAVEFDIQLETEECVRGHPAPAARSALLAAAGAHPVELGDAHRELEAELR 130

Query: 175 RMAPPNGRAVLVFRSPCGCPIARMEVWG 258
+MAPPNGR VL+FRSPCGCP RMEVWG
Sbjct: 131 KMAPPNGRTVLIFRSPCGCPKGRMEVWG 158


>tr|B6SQQ9|B6SQQ9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 213

Score = 117 bits (293), Expect = 3e-25
Identities = 54/88 (61%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK--LAPSATSFTQAVPWKASIELGEDHKELEAELK 174
C P+C+GLKKAVEFDIQLE+E+CV+ P+A S A +ELG++ +ELEAEL+
Sbjct: 117 CGKPRCRGLKKAVEFDIQLETEECVRGRPGPTARSALLAAAGARPVELGDEQRELEAELR 176

Query: 175 RMAPPNGRAVLVFRSPCGCPIARMEVWG 258
+MAPPNGR VL+FR+PCGCP RMEVWG
Sbjct: 177 KMAPPNGRTVLIFRAPCGCPKGRMEVWG 204


>tr|Q9M8K0|Q9M8K0_ARATH F28L1.12 protein (At3g06180) OS=Arabidopsis
thaliana GN=At3g06180 PE=2 SV=1
Length = 241

Score = 114 bits (285), Expect = 2e-24
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRM 180
C NPKC+GLKKA+EFD+QL++E+CVK AT +PWK E D++ L AEL+RM
Sbjct: 135 CRNPKCKGLKKAMEFDLQLQTEECVK--SGATKEIDRLPWKGGSESNPDYECLRAELRRM 192

Query: 181 APPNGRAVLVFRSPCGCPIARMEVWG 258
APPNGRAVL+FRS CGCP+A++E WG
Sbjct: 193 APPNGRAVLLFRSRCGCPVAKLEGWG 218


>tr|Q6AVN3|Q6AVN3_ORYSJ Os05g0488500 protein OS=Oryza sativa subsp.
japonica GN=OJ1119_H02.10 PE=2 SV=1
Length = 241

Score = 112 bits (280), Expect = 9e-24
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK-------LAPSATSFTQAVPWKASIELGEDHKEL 159
C P+C+GL+KAVEFDIQLE+E+CV+ P + A ++LG+ H+EL
Sbjct: 140 CGKPRCRGLRKAVEFDIQLETEECVRGQQQRLLPLPGGRAALLAAAGARPVQLGDAHREL 199

Query: 160 EAELKRMAPPNGRAVLVFRSPCGCPIARMEVWG 258
EAEL++MAPPNGR VL+FRSPCGCP RMEVWG
Sbjct: 200 EAELRKMAPPNGRTVLIFRSPCGCPKGRMEVWG 232


>tr|B8AZH1|B8AZH1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20410 PE=4 SV=1
Length = 241

Score = 112 bits (280), Expect = 9e-24
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVK-------LAPSATSFTQAVPWKASIELGEDHKEL 159
C P+C+GL+KAVEFDIQLE+E+CV+ P + A ++LG+ H+EL
Sbjct: 140 CGKPRCRGLRKAVEFDIQLETEECVRGQQQRLLPLPGGRAALLAAAGARPVQLGDAHREL 199

Query: 160 EAELKRMAPPNGRAVLVFRSPCGCPIARMEVWG 258
EAEL++MAPPNGR VL+FRSPCGCP RMEVWG
Sbjct: 200 EAELRKMAPPNGRTVLIFRSPCGCPKGRMEVWG 232


>tr|A7NWE9|A7NWE9_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019893001
PE=4 SV=1
Length = 226

Score = 110 bits (274), Expect = 5e-23
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +1

Query: 1 CDNPKCQGLKKAVEFDIQLESEKCVKLAPSATSFTQAVPWKASIELGEDHKELEAELKRM 180
CDNP C+GLKKA+EFD+QL++E+C+K S++ +PWK E D++ L +EL++M
Sbjct: 121 CDNPGCKGLKKAMEFDLQLQTEECLK---SSSKEIDVLPWKGGSEANPDYECLRSELRKM 177

Query: 181 APPNGRAVLVFRSPCGCPIARMEVWG 258
APPNGRAVL+FR+ CGCPIA++E WG
Sbjct: 178 APPNGRAVLLFRARCGCPIAKLEGWG 203