BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917963|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H11.
         (331 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7T6S6|NS7B_CVCBG Non-structural protein 7b OS=Canine coronav...    29   6.4  
sp|P46983|YJS5_YEAST Uncharacterized protein YJL185C OS=Saccharo...    29   8.4  

>sp|Q7T6S6|NS7B_CVCBG Non-structural protein 7b OS=Canine
           coronavirus (strain BGF10) GN=7b PE=4 SV=1
          Length = 213

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 112 IVVKAQTAQLNVG-NPSFAPSSDIGILL*RHKRLH*MSETHHLSSDMRCYFDKFIPIVFP 288
           I   ++   LNVG + SF+ +  IGI +   K +  + E  HL    R YF K+ P    
Sbjct: 121 ISATSREKMLNVGCHTSFSVNLPIGIQIYHDKDMKLLVEGRHLECAHRVYFVKYCPYHAH 180

Query: 289 WNALCALLKVY 321
                  LKVY
Sbjct: 181 GYCFDDKLKVY 191


>sp|P46983|YJS5_YEAST Uncharacterized protein YJL185C
           OS=Saccharomyces cerevisiae GN=YJL185C PE=1 SV=1
          Length = 293

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 197 LYNNIPISDDGANDGFPTFN 138
           L+ N+P S DG N GFP ++
Sbjct: 141 LHQNVPQSSDGVNHGFPVYS 160

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917963|Adiantum capillus-veneris mRNA, clone:
YMU001_000107_H11.
         (331 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q22DK2|Q22DK2_TETTH Putative uncharacterized protein OS=Tetra...    35   2.5  
tr|Q5NLB8|Q5NLB8_ZYMMO Biotin protein ligase OS=Zymomonas mobili...    34   4.2  

>tr|Q22DK2|Q22DK2_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00942780 PE=4
           SV=1
          Length = 476

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -1

Query: 265 CQNSTSCQKTNDGFLTFNGAAC----AFTTIYQYQMMVQMMG 152
           CQNSTSCQK + GF  F+  +C         Y+Y+  V   G
Sbjct: 113 CQNSTSCQKCSTGFYLFSDGSCKTCDTSNGYYKYRQDVDRCG 154


>tr|Q5NLB8|Q5NLB8_ZYMMO Biotin protein ligase OS=Zymomonas mobilis
           GN=birA PE=4 SV=1
          Length = 267

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 118 VKAQTAQLNVGNPSFAPSSDIGILL*RHKRLH*MSETHHLSSDMRCYFDKFIP 276
           VKA + ++     +FA   DI  L   H R+  + ET   +SDMR   D+ +P
Sbjct: 4   VKACSLEMKANQKAFAEKVDITTLWPEHSRIRVVEETESTNSDMRLLADQGLP 56