BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917966|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_A03.
         (354 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4K5P2|TRMA_PSEF5 tRNA (uracil-5-)-methyltransferase OS=Pseud...    33   0.45 
sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alph...    30   2.8  
sp|Q9RHS9|TRMA_PSEFL tRNA (uracil-5-)-methyltransferase OS=Pseud...    29   6.5  

>sp|Q4K5P2|TRMA_PSEF5 tRNA (uracil-5-)-methyltransferase
           OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
           GN=trmA PE=3 SV=1
          Length = 359

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 70  PLSHT-FWVQFLVALASSSQLGTPCYHFVTLPHLHSIALQIAA 195
           PLSH  F V+FL  LA  + + T CYH     H H  A Q+AA
Sbjct: 98  PLSHKLFQVEFLTTLAGDAMI-TLCYHRPLDEHWHKAASQLAA 139


>sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alpha
            OS=Homo sapiens GN=SCN5A PE=1 SV=2
          Length = 2016

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -3

Query: 271  EEEEDRGQLDLEQTGAKSARQHPHF----APRFARQWSADVAMSQSDNMACPTGKNWPRR 104
            +EE++   L  E+  +K     P      AP  +R WS   A + S+  A  +  +W ++
Sbjct: 1059 QEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADWRQQ 1118

Query: 103  RETEPRKCG 77
             + EP+  G
Sbjct: 1119 WKAEPQAPG 1127


>sp|Q9RHS9|TRMA_PSEFL tRNA (uracil-5-)-methyltransferase
           OS=Pseudomonas fluorescens GN=trmA PE=3 SV=1
          Length = 363

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 73  LSHT-FWVQFLVALASSSQLGTPCYHFVTLPHLHSIALQIAAQ-NVGV 210
           LSH  F V+FL  LA  + + T CYH     H H+ A ++AA  NV +
Sbjct: 103 LSHKLFQVEFLTTLAGDAMI-TLCYHRPLDEHWHTAANKLAADLNVSI 149

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917966|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_A03.
         (354 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q21GA0|Q21GA0_SACD2 Putative retaining b-glycosidase OS=Sacch...    39   0.17 
tr|Q0CNZ4|Q0CNZ4_ASPTN Putative uncharacterized protein OS=Asper...    35   1.4  
tr|A2SDU0|A2SDU0_METPP Inner-membrane translocator OS=Methylibiu...    35   2.5  
tr|B6HMT2|B6HMT2_PENCH Pc21g09140 protein OS=Penicillium chrysog...    33   9.1  

>tr|Q21GA0|Q21GA0_SACD2 Putative retaining b-glycosidase
           OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
           DSM 17024) GN=gly26B PE=4 SV=1
          Length = 644

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = -1

Query: 252 VNWT*SRLELSLRANTHILRRDLQGNGVQMWQCHKVITWRAQLGRTGQGDEKLNPESVA 76
           +NW+   +ELS   +   L  D+  + VQ WQC+  I  R  L  T     +L+P S++
Sbjct: 447 INWSTMEVELSAENSEKCLDLDMASSNVQQWQCYSNINQRWFLKTTPNAPVQLDPPSIS 505


>tr|Q0CNZ4|Q0CNZ4_ASPTN Putative uncharacterized protein
           OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_04590
           PE=4 SV=1
          Length = 927

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 271 EEEEDRGQLDLEQTGAKSARQHPHFAPRFARQWSADVAMSQSDNM 137
           EE+ED   L  ++   +SA QHP  +P F RQ S D   S++ ++
Sbjct: 416 EEDEDEPILAADEVRPESAHQHPAISPTFGRQGSFDYERSRTPSV 460


>tr|A2SDU0|A2SDU0_METPP Inner-membrane translocator OS=Methylibium
           petroleiphilum (strain PM1) GN=Mpe_A0767 PE=4 SV=1
          Length = 305

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 73  LSHTFWVQFLVALASSSQLGTPCYHFVTLPHLHSIALQIAAQNVGVGAQT*L-QSALGPV 249
           LS + WV  LVA  + + L        TLP ++ +A  IA   +G G    L +  + P 
Sbjct: 60  LSGSVWVGVLVAAGAGALLALLHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQ 119

Query: 250 DPYLLPLLLRSWS 288
            P L P+ L  WS
Sbjct: 120 APQLTPIALGGWS 132


>tr|B6HMT2|B6HMT2_PENCH Pc21g09140 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc21g09140 PE=4 SV=1
          Length = 1173

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 111 GQFFPVGHAMLSLCDIATSALHCLANRGAKCGCWRADLAPVC 236
           G+  P GH    LC + +    CL N   KC C R D   +C
Sbjct: 525 GKTLPCGHPCEKLCHVGSCGA-CLRNVHIKCNCGRTDNLTIC 565