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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917975
Clone id YMU001_000108_B01
Library
Length 333
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGAGCAGCAACATCGTCTTGTCGGCCACTATGAGGCAAAGCAATTTGAGATTTCGACAGA
AGCAGCTCTGAGAAGGTACAGAATCGGGGAAACCCTAGCTTTGCAATGACCAGTGCTGAA
CCGTTTCTGTCAAGCTCTAAATTCGCCCTGGCAAGCTTGCCATGGAGAGGCAGACTGTCA
AGATCGTCCTTGCGGAGATCCCTGAGGAGGATTAATGGAAGCTTGGGGAGCTTGGCGAGG
AGCGAGGGCAAGGAAGCGACAAATTTGGCTTTAGAATCGGAGGCCTGCTTAGCGATTTCT
GCGGGAGTGTTGAGAGGGTTAGTGGTGGTAACA
■■Homology search results ■■ -
sp_hit_id Q10S72
Definition sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica
Align length 21
Score (bit) 36.6
E-value 0.04
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917975|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_B01.
         (333 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sa...    37   0.040
sp|Q0DV32|4CLL1_ORYSJ 4-coumarate--CoA ligase-like 1 OS=Oryza sa...    34   0.20 
sp|Q84P21|4CLL5_ARATH 4-coumarate--CoA ligase-like 5 OS=Arabidop...    33   0.34 
sp|P31685|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tubero...    32   0.99 
sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tubero...    32   0.99 
sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana taba...    32   1.3  
sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana taba...    32   1.3  
sp|Q6ZAC1|4CL5_ORYSJ Probable 4-coumarate--CoA ligase 5 OS=Oryza...    31   1.7  
sp|Q9S725|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis th...    31   1.7  
sp|Q84P26|4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidop...    31   2.2  
sp|Q42524|4CL1_ARATH 4-coumarate--CoA ligase 1 OS=Arabidopsis th...    31   2.2  
sp|Q84P25|4CLL2_ARATH 4-coumarate--CoA ligase-like 2 OS=Arabidop...    30   2.9  
sp|P41636|4CL_PINTA 4-coumarate--CoA ligase OS=Pinus taeda GN=4C...    29   6.4  
sp|Q9LU36|4CL4_ARATH 4-coumarate--CoA ligase 4 OS=Arabidopsis th...    29   6.4  

>sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza
           sativa subsp. japonica GN=4CLL4 PE=2 SV=1
          Length = 552

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSK 270
           +TT NPLNTPAEIAKQ +D++
Sbjct: 116 LTTANPLNTPAEIAKQVADAR 136


>sp|Q0DV32|4CLL1_ORYSJ 4-coumarate--CoA ligase-like 1 OS=Oryza
           sativa subsp. japonica GN=4CLL1 PE=2 SV=2
          Length = 552

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           TT NP  TP EIAKQ SD++AK V
Sbjct: 114 TTVNPDYTPREIAKQVSDARAKLV 137


>sp|Q84P21|4CLL5_ARATH 4-coumarate--CoA ligase-like 5 OS=Arabidopsis
           thaliana GN=4CLL5 PE=1 SV=2
          Length = 546

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDS 273
           +TTTNPLNT  EIAKQ  DS
Sbjct: 109 ITTTNPLNTSNEIAKQIKDS 128


>sp|P31685|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tuberosum
           GN=4CL2 PE=3 SV=1
          Length = 545

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           T  NPL TPAE+ KQA  S AK V
Sbjct: 108 TMANPLFTPAEVVKQAKASSAKIV 131


>sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tuberosum
           GN=4CL1 PE=3 SV=1
          Length = 545

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           T  NPL TPAE+ KQA  S AK V
Sbjct: 108 TMANPLFTPAEVVKQAKASSAKIV 131


>sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum
           GN=4CL2 PE=2 SV=1
          Length = 542

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           T  NPL TPAE+ KQA  S AK +
Sbjct: 105 TMANPLFTPAEVVKQAKASSAKII 128


>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum
           GN=4CL1 PE=2 SV=1
          Length = 547

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           T  NPL TPAE+ KQA  S AK +
Sbjct: 110 TMANPLFTPAEVVKQAKASSAKII 133


>sp|Q6ZAC1|4CL5_ORYSJ Probable 4-coumarate--CoA ligase 5 OS=Oryza
           sativa subsp. japonica GN=4CL5 PE=2 SV=1
          Length = 539

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           TT NPL+TP EIAKQ + S A  V
Sbjct: 103 TTANPLHTPPEIAKQVAASGATVV 126


>sp|Q9S725|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis
           thaliana GN=4CL2 PE=1 SV=2
          Length = 556

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           T+ NP  TPAEI+KQA  S AK +
Sbjct: 116 TSANPFFTPAEISKQAKASAAKLI 139


>sp|Q84P26|4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidopsis
           thaliana GN=4CLL8 PE=2 SV=2
          Length = 550

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSKAK 264
           +TT NPLNT +EI +Q +DS  K
Sbjct: 117 LTTANPLNTASEILRQIADSNPK 139
tr_hit_id B6E466
Definition tr|B6E466|B6E466_LEUGL 4-coumarate CoA ligase 1 OS=Leucaena glauca
Align length 25
Score (bit) 39.3
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917975|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_B01.
         (333 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6E466|B6E466_LEUGL 4-coumarate CoA ligase 1 OS=Leucaena glau...    39   0.10 
tr|A7NVS9|A7NVS9_VITVI Chromosome chr18 scaffold_1, whole genome...    37   0.38 
tr|B6SV48|B6SV48_MAIZE 4-coumarate--CoA ligase 2 OS=Zea mays PE=...    37   0.50 
tr|A7REI2|A7REI2_LEUGL 4-coumarate:CoA ligase (Fragment) OS=Leuc...    37   0.50 
tr|O48869|O48869_POPJC 4-coumarate:CoA ligase 1 OS=Populus jacki...    37   0.65 
tr|B7EYA8|B7EYA8_ORYSJ cDNA clone:001-202-E07, full insert seque...    37   0.65 
tr|B4G058|B4G058_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.65 
tr|A3ADT7|A3ADT7_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.65 
tr|A2XC42|A2XC42_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.65 
tr|Q9LL49|Q9LL49_RUBID 4-coumarate:coA ligase 1 OS=Rubus idaeus ...    35   2.5  
tr|Q9LKM9|Q9LKM9_RUBID 4-coumarate-CoA ligase 1 (Fragment) OS=Ru...    35   2.5  
tr|A7NVS8|A7NVS8_VITVI Chromosome chr18 scaffold_1, whole genome...    35   2.5  
tr|A5B2E7|A5B2E7_VITVI Putative uncharacterized protein OS=Vitis...    35   2.5  
tr|Q9LL50|Q9LL50_RUBID 4-coumarate:coA ligase 2 OS=Rubus idaeus ...    34   3.2  
tr|Q9LKM8|Q9LKM8_RUBID 4-coumarate-CoA ligase 2 (Fragment) OS=Ru...    34   3.2  
tr|Q8S564|Q8S564_SOYBN 4-coumarate:coenzyme A ligase OS=Glycine ...    34   3.2  
tr|Q3YAU2|Q3YAU2_EUCCA 4-coumarate:coenzyme A ligase OS=Eucalypt...    34   3.2  
tr|B8AND5|B8AND5_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|B7F991|B7F991_ORYSJ cDNA, clone: J075140K23, full insert sequ...    34   3.2  
tr|B2Z6P1|B2Z6P1_POPTR 4-coumarate:CoA ligase OS=Populus trichoc...    34   3.2  
tr|A8R7L9|A8R7L9_EUCGG 4-coumarate:coenzyme A ligase OS=Eucalypt...    34   3.2  
tr|A3AE78|A3AE78_ORYSJ Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|A5BPU4|A5BPU4_VITVI Putative uncharacterized protein (Chromos...    34   4.2  
tr|B1VKP2|B1VKP2_STRGG Putative 4-coumarate:CoA ligase OS=Strept...    33   5.5  
tr|Q3ED88|Q3ED88_ARATH Uncharacterized protein At1g20510.2 OS=Ar...    33   5.5  
tr|B4FAY2|B4FAY2_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.4  
tr|B2Z6P0|B2Z6P0_POPTR 4-coumarate:CoA ligase OS=Populus trichoc...    33   9.4  
tr|A7PQS6|A7PQS6_VITVI Chromosome chr6 scaffold_25, whole genome...    33   9.4  
tr|B4JL04|B4JL04_DROGR GH11952 OS=Drosophila grimshawi GN=GH1195...    33   9.4  

>tr|B6E466|B6E466_LEUGL 4-coumarate CoA ligase 1 OS=Leucaena glauca
           PE=2 SV=1
          Length = 542

 Score = 39.3 bits (90), Expect = 0.10
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSKAKFV 258
           VTT NPL+TPAE+AKQA+ SK+K +
Sbjct: 102 VTTANPLSTPAELAKQATASKSKLI 126


>tr|A7NVS9|A7NVS9_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015554001
           PE=3 SV=1
          Length = 542

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSKAKFV 258
           VTTTNPLNTP EI KQ  DSK   V
Sbjct: 114 VTTTNPLNTPREIGKQIVDSKPVLV 138


>tr|B6SV48|B6SV48_MAIZE 4-coumarate--CoA ligase 2 OS=Zea mays PE=2
           SV=1
          Length = 520

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAK 264
           TT NPL TP E+AKQA+DS+AK
Sbjct: 78  TTANPLYTPREVAKQATDSRAK 99


>tr|A7REI2|A7REI2_LEUGL 4-coumarate:CoA ligase (Fragment)
           OS=Leucaena glauca GN=4CL PE=2 SV=1
          Length = 409

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSKAKFV 258
           VTT NP  TPAE+AKQA+ SK+K +
Sbjct: 72  VTTANPFFTPAELAKQATSSKSKLI 96


>tr|O48869|O48869_POPJC 4-coumarate:CoA ligase 1 OS=Populus jackii
           GN=4CL1 PE=2 SV=1
          Length = 557

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -2

Query: 329 TTTNPLNTPAEIAKQASDSKAKFV 258
           TT NP  TPAE+AKQA+ SKAK +
Sbjct: 106 TTANPFYTPAEVAKQATASKAKLI 129


>tr|B7EYA8|B7EYA8_ORYSJ cDNA clone:001-202-E07, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 552

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSK 270
           +TT NPLNTPAEIAKQ +D++
Sbjct: 116 LTTANPLNTPAEIAKQVADAR 136


>tr|B4G058|B4G058_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 551

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSK 270
           +TT NPLNTPAEIAKQ +D++
Sbjct: 112 LTTANPLNTPAEIAKQVADAR 132


>tr|A3ADT7|A3ADT7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008959 PE=3 SV=1
          Length = 578

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSK 270
           +TT NPLNTPAEIAKQ +D++
Sbjct: 116 LTTANPLNTPAEIAKQVADAR 136


>tr|A2XC42|A2XC42_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09863 PE=3 SV=1
          Length = 565

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSK 270
           +TT NPLNTPAEIAKQ +D++
Sbjct: 116 LTTANPLNTPAEIAKQVADAR 136


>tr|Q9LL49|Q9LL49_RUBID 4-coumarate:coA ligase 1 OS=Rubus idaeus
           PE=2 SV=1
          Length = 543

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = -2

Query: 332 VTTTNPLNTPAEIAKQASDSKAKFV 258
           +T  NP  TPAEIAKQA  SKAK +
Sbjct: 104 MTAANPFFTPAEIAKQAKASKAKLI 128