BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917985|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_C02.
         (472 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3V3G7|GRAM2_MOUSE GRAM domain-containing protein 2 OS=Mus mu...    30   4.2  
sp|Q91437|PYR1_SQUAC CAD protein OS=Squalus acanthias GN=CAD PE=...    30   5.3  
sp|Q9TTK4|LYST_BOVIN Lysosomal-trafficking regulator OS=Bos taur...    30   5.3  
sp|P57601|TSGA_BUCAI Protein tsgA homolog OS=Buchnera aphidicola...    29   9.3  

>sp|Q3V3G7|GRAM2_MOUSE GRAM domain-containing protein 2 OS=Mus
           musculus GN=Gramd2 PE=2 SV=1
          Length = 320

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 101 MRMLRLKEWSGNSSLHSPISPVKFYCPFAEKMGG*QQ 211
           M    L +W  N  +H  ++P+K + P  EK G  Q+
Sbjct: 5   MMFFCLSDWQSNQQMHGKMAPLKSHVPCTEKPGKVQE 41


>sp|Q91437|PYR1_SQUAC CAD protein OS=Squalus acanthias GN=CAD PE=2
           SV=1
          Length = 2242

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 338 NKLHFKPNVHEGTLGCM-*AKNHSFFINKLRSIQKEWSLI 222
           N+ H +P +HEGT  C   ++NH F +    S+ ++WS++
Sbjct: 273 NRGHNQPCIHEGTQRCFYTSQNHGFAVEPC-SLPRDWSVL 311


>sp|Q9TTK4|LYST_BOVIN Lysosomal-trafficking regulator OS=Bos taurus
            GN=LYST PE=1 SV=1
          Length = 3796

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = -3

Query: 329  HFKPNVHEGTLGCM*AKNHSFFINKLRSIQKEWSLIRLDIVANHPFSLRKDNKISQAR*E 150
            H KP    G+LGC   K  SF  + + S  ++WS +R           ++D  IS    E
Sbjct: 2110 HIKPRKLTGSLGCSIDKLQSFVDDGVASQPEKWSPLRSSETLE---KSKQDAFISSC--E 2164

Query: 149  NAMMSCLTIPS 117
            +A M C T P+
Sbjct: 2165 SAKMVCETEPA 2175


>sp|P57601|TSGA_BUCAI Protein tsgA homolog OS=Buchnera aphidicola
           subsp. Acyrthosiphon pisum GN=tsgA PE=3 SV=1
          Length = 388

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 121 LQTKHPHNTLLYSA*IFGACGTLTTYFPLVPI-PPRGPYI 5
           LQTKHP   L+    +FG  GT  T+    PI   +G Y+
Sbjct: 320 LQTKHPSPKLINLILLFGTIGTFLTFIITSPIVEAKGLYV 359

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917985|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_C02.
         (472 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0FIG4|A0FIG4_9HYME Carbamoyl-phosphate synthetase (Fragment)...    33   9.3  

>tr|A0FIG4|A0FIG4_9HYME Carbamoyl-phosphate synthetase (Fragment)
           OS=Hockeria sp. CD023 GN=CAD PE=2 SV=1
          Length = 561

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 338 NKLHFKPNVHEGTLGC-M*AKNHSFFINKLRSIQKEWSLI 222
           N+ H +P +H GT  C M ++NH F I+   S+ KEW ++
Sbjct: 241 NRGHNQPAIHHGTKRCYMTSQNHGFAIDS-ESLPKEWEVL 279