BP917989
Clone id YMU001_000108_C07
Library
Length 270
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAATTGAAGAAGGCATGAGCCGAAGCATGAAGGTAGATTCGAGTAGTGAATTTGACAAAT
CAGGTGACCAAGATTTGATGGCGGACTGTTGATTGGCAAACAATGCTAGTGAAGTCAATA
AACATAATCGAGTAGACAAGGATGATATATATTGTAAAATCGTCTAATCCAGATAGCATG
TATACATATTCTTTGTTGGCACTGCCTTCTGAGAGAAAGGTAGTGATGATGTGGAGCTTA
ATAGAGCCAGTGTACAGTGGACATTAAAAT
■■Homology search results ■■ -
sp_hit_id Q29IC2
Definition sp|Q29IC2|RIC8_DROPS Synembryn OS=Drosophila pseudoobscura pseudoobscura
Align length 29
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917989|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_C07.
(270 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q29IC2|RIC8_DROPS Synembryn OS=Drosophila pseudoobscura pseud... 31 2.2
sp|Q9W358|RIC8_DROME Synembryn OS=Drosophila melanogaster GN=ric... 31 2.2
sp|Q32LT7|TTYH3_DANRE Protein tweety homolog 3 OS=Danio rerio GN... 30 3.8

>sp|Q29IC2|RIC8_DROPS Synembryn OS=Drosophila pseudoobscura
pseudoobscura GN=ric8a PE=3 SV=1
Length = 566

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1

Query: 210 RRQCQQRICIHAIWIRRFYNIYHPCLLDY 124
RRQC ++ C+ AI R ++ HPC L+Y
Sbjct: 152 RRQCLRQHCLDAILKRVASSMRHPCALEY 180


>sp|Q9W358|RIC8_DROME Synembryn OS=Drosophila melanogaster GN=ric8a
PE=1 SV=2
Length = 573

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1

Query: 210 RRQCQQRICIHAIWIRRFYNIYHPCLLDY 124
RRQC ++ C+ AI R ++ HPC L+Y
Sbjct: 150 RRQCLRQHCLDAILKRVASSMRHPCALEY 178


>sp|Q32LT7|TTYH3_DANRE Protein tweety homolog 3 OS=Danio rerio
GN=ttyh3 PE=2 SV=1
Length = 560

Score = 30.0 bits (66), Expect = 3.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -2

Query: 257 LYTGSIKLHIITTFLSEGSANKEYVYMLSGL----DDFTIYIILVYSIMFIDFTSIVC 96
L + + LH +T + S + +YV L+GL + IY++L + + F+SIVC
Sbjct: 351 LNSTEVSLHHLTALVDCRSLHMDYVQALTGLCYDGVEGLIYLVLFSFVTALMFSSIVC 408


tr_hit_id Q0TWQ5
Definition tr|Q0TWQ5|Q0TWQ5_PHANO Putative uncharacterized protein OS=Phaeosphaeria nodorum
Align length 38
Score (bit) 32.7
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917989|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_C07.
(270 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0TWQ5|Q0TWQ5_PHANO Putative uncharacterized protein OS=Phaeo... 33 9.1

>tr|Q0TWQ5|Q0TWQ5_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_15977 PE=4 SV=2
Length = 249

Score = 32.7 bits (73), Expect = 9.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1

Query: 156 YNIYHPCLLDYVY*LH*HCLPINSPPSNLGHLICQIHY 43
YNIY P VY L H P S P+++ ++C +HY
Sbjct: 104 YNIYQPSTWPIVY-LPYHTTPGFSTPTHISEMLCHVHY 140