BP917992 |
Clone id |
YMU001_000108_C12 |
Library |
YMU01 |
Length |
515 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000108_C12. |
Accession |
BP917992 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGCTGTGCTTGGGCAATTAAAAGTTGTGCCTATGCAGGCCTTGTAATGTAGCCCTATTA TGCATACACAGTCAATGCATGAAAAAGATTTATGTTGTGCAAGATGTGGGTATAAGCAAT TTGCTAATTGGCATTTGTTGGCGAGGCTTCTTATTCTAAGCAATGTAATGGTCTTTGAAG CTCATGTATCGTTGCTTGATTAAAGCAACTTGCTCTCGTCTAACTGTACTGTAATCGTAG AAAGAATTGTAAGAATTCAAGCGGTGATGCACTGACAGCAGTTTCGTTCTTCTTCTTTGG GACCCATTTCTTTGCGATTATTGGTTGTTTGGTTGTTGGCTCTTGTTTGGGAACCCATAC TTGCCCGTGCTTTGTTTGTGTTTGAAGAGACTTCTTTGGGATCCACCTTTTTGTTGTGTG AGTCAACAGTGGTCTTTGCTTCAGCCCTTGTACTCTTGGTTGGGGACGGGATTTAGGCTT TGAAAGTTGATACTGTGGTTGTTTTGGAATCCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5GNJ0 |
Definition |
sp|A5GNJ0|IF2_SYNPW Translation initiation factor IF-2 OS=Synechococcus sp. (strain WH7803) |
Align length |
84 |
Score (bit) |
37.0 |
E-value |
0.054 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8XV50 |
Definition |
tr|A8XV50|A8XV50_CAEBR CBR-GRD-6 protein OS=Caenorhabditis briggsae |
Align length |
82 |
Score (bit) |
42.7 |
E-value |
0.011 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917992|Adiantum capillus-veneris mRNA, clone: YMU001_000108_C12. (515 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8XV50|A8XV50_CAEBR CBR-GRD-6 protein OS=Caenorhabditis brigg... 43 0.011 tr|B6UHB6|B6UHB6_MAIZE Histone H1 OS=Zea mays PE=2 SV=1 37 0.44 tr|B4FD93|B4FD93_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.44 tr|B6L3A4|B6L3A4_BRAFL Putative uncharacterized protein OS=Branc... 37 0.75 tr|A1CKA7|A1CKA7_ASPCL Putative uncharacterized protein OS=Asper... 36 1.3 tr|Q9H2E2|Q9H2E2_HUMAN Neuropilin-2 soluble isoform 9 OS=Homo sa... 35 2.2 tr|A8K4G9|A8K4G9_HUMAN cDNA FLJ75267, highly similar to Homo sap... 35 2.2 tr|Q7Q5Q6|Q7Q5Q6_ANOGA AGAP006266-PA OS=Anopheles gambiae GN=AGA... 35 2.9 tr|A0DEX7|A0DEX7_PARTE Chromosome undetermined scaffold_48, whol... 35 2.9 tr|A2G6C0|A2G6C0_TRIVA Putative uncharacterized protein OS=Trich... 34 3.7 tr|A2DV59|A2DV59_TRIVA Putative uncharacterized protein OS=Trich... 34 3.7 tr|B4QFW3|B4QFW3_DROSI GD25670 OS=Drosophila simulans GN=GD25670... 34 4.9 tr|A2HEI6|A2HEI6_TRIVA Putative uncharacterized protein (Fragmen... 34 4.9 tr|A2H672|A2H672_TRIVA Putative uncharacterized protein OS=Trich... 34 4.9 tr|Q8I6U6|Q8I6U6_PLAF7 Gene 11-1 protein OS=Plasmodium falciparu... 33 6.4 tr|Q3SDA4|Q3SDA4_PARTE Mini antigen (Chromosome undetermined sca... 33 6.4 tr|B7P4W6|B7P4W6_IXOSC Serine protease, putative (Fragment) OS=I... 33 6.4 tr|A7S2A8|A7S2A8_NEMVE Predicted protein OS=Nematostella vectens... 33 6.4 tr|Q0CMC3|Q0CMC3_ASPTN Putative uncharacterized protein OS=Asper... 33 6.4 tr|B2ADK8|B2ADK8_PODAN Predicted CDS Pa_4_1350 OS=Podospora anse... 33 6.4 tr|A9NVS0|A9NVS0_PICSI Putative uncharacterized protein OS=Picea... 33 8.3 tr|Q9XSX1|Q9XSX1_BOVIN Calpastatin OS=Bos taurus PE=2 SV=1 33 8.3 tr|Q52ZH3|Q52ZH3_BOVIN Calpastatin type I (Fragment) OS=Bos taur... 33 8.3 tr|Q52ZH2|Q52ZH2_BOVIN Calpastatin type II (Fragment) OS=Bos tau... 33 8.3 tr|Q52ZH1|Q52ZH1_BOVIN Calpastatin type III (Fragment) OS=Bos ta... 33 8.3 tr|Q52ZG8|Q52ZG8_BOVIN Calpastatin type II OS=Bos taurus GN=CAST... 33 8.3 tr|Q52ZG7|Q52ZG7_BOVIN Calpastatin type III OS=Bos taurus GN=CAS... 33 8.3 tr|Q52ZG6|Q52ZG6_BOVIN Calpastatin type I OS=Bos taurus GN=CAST ... 33 8.3 tr|A7LFP6|A7LFP6_BOSMU Calpastatin OS=Bos mutus grunniens GN=CAS... 33 8.3 tr|A6QNM1|A6QNM1_BOVIN CAST protein (Fragment) OS=Bos taurus GN=... 33 8.3
>tr|A8XV50|A8XV50_CAEBR CBR-GRD-6 protein OS=Caenorhabditis briggsae GN=Cbr-grd-6 PE=4 SV=1 Length = 640
Score = 42.7 bits (99), Expect = 0.011 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = -3
Query: 507 PKQPQYQLSKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTTK 328 P +P + +RPQPR Q + RP + TT+R P + T + + PTT+ Sbjct: 286 PVRPAPYVEPTTARPQPRPQPPRTRPYVVPTTRRPAPPRPAPTAAAYIEPTTTTPRPTTR 345
Query: 327 QPIIAKKWVPKKKNETAVSASP 262 + +++ P K T +A+P Sbjct: 346 RATVSRLSDPPTKRITTTTAAP 367
>tr|B6UHB6|B6UHB6_MAIZE Histone H1 OS=Zea mays PE=2 SV=1 Length = 260
Score = 37.4 bits (85), Expect = 0.44 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = -3
Query: 507 PKQPQYQLSKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTTK 328 PK P +KP ++ +P+ G K +PL + K+ T + V K+ Sbjct: 173 PKTPAKPKAKPAAKAKPKTAGAKPKPLAKKAGRPAKAAKTSAKDTPGKKAPVAKKSAAAA 232
Query: 327 QPIIAKKWVPKKKNETAVSASP 262 + AKK P KK T V +P Sbjct: 233 KKAPAKKAAPSKKAATPVRKAP 254
>tr|B4FD93|B4FD93_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 261
Score = 37.4 bits (85), Expect = 0.44 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = -3
Query: 507 PKQPQYQLSKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTTK 328 PK P +KP ++ +P+ G K +PL + K+ T + V K+ Sbjct: 174 PKTPAKPKAKPAAKAKPKTAGAKPKPLAKKAGRPAKAAKTSAKDTPGKKAPVAKKSAAAA 233
Query: 327 QPIIAKKWVPKKKNETAVSASP 262 + AKK P KK T V +P Sbjct: 234 KKAPAKKAAPSKKAATPVRKAP 255
>tr|B6L3A4|B6L3A4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_65583 PE=4 SV=1 Length = 2327
Score = 36.6 bits (83), Expect = 0.75 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 9/90 (10%) Frame = -3
Query: 504 KQPQYQLSKPKSRPQP--RVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTT 331 +QP + KPK +P+P + K+ P T T++ PK T + PK EPTT Sbjct: 858 QQPSKETEKPKEQPKPFKETEKPKEEPKSTKVTEQ--PKDEPATTKPAKETEQPKNEPTT 915
Query: 330 KQPIIAKK-------WVPKKKNETAVSASP 262 +P K + K E A SP Sbjct: 916 SKPDTPNKKAAETRPVIEKPSEEKAAPPSP 945
>tr|A1CKA7|A1CKA7_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus GN=ACLA_037910 PE=4 SV=1 Length = 469
Score = 35.8 bits (81), Expect = 1.3 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = -3
Query: 477 PKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTTKQPIIAKKWVP 298 PK RP+P L+Q+P P K + Q K P +P++K P+ AKK P Sbjct: 228 PKPRPKPLTNPLRQQPR---------PPKPSREQAK------PVSKPSSKPPVQAKKEKP 272
Query: 297 KKKNETAVSASPLE 256 K+ + P+E Sbjct: 273 KEDEDNLEEDFPIE 286
>tr|Q9H2E2|Q9H2E2_HUMAN Neuropilin-2 soluble isoform 9 OS=Homo sapiens GN=NRP2 PE=2 SV=1 Length = 555
Score = 35.0 bits (79), Expect = 2.2 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 9/81 (11%) Frame = -3
Query: 513 WIPKQPQYQ---------LSKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQ 361 W P+ PQ Q L PK+ +QG + +T R +K + + +G+ Sbjct: 474 WFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK 533
Query: 360 VWVPKQEPTTKQPIIAKKWVP 298 W Q+P T+QP + W P Sbjct: 534 DWEYIQDPRTQQPKVGCSWRP 554
>tr|A8K4G9|A8K4G9_HUMAN cDNA FLJ75267, highly similar to Homo sapiens neuropilin-2 soluble isoform 9 (NRP2) mRNA OS=Homo sapiens PE=2 SV=1 Length = 555
Score = 35.0 bits (79), Expect = 2.2 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 9/81 (11%) Frame = -3
Query: 513 WIPKQPQYQ---------LSKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQTQTKHGQ 361 W P+ PQ Q L PK+ +QG + +T R +K + + +G+ Sbjct: 474 WFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK 533
Query: 360 VWVPKQEPTTKQPIIAKKWVP 298 W Q+P T+QP + W P Sbjct: 534 DWEYIQDPRTQQPKVGCSWRP 554
>tr|Q7Q5Q6|Q7Q5Q6_ANOGA AGAP006266-PA OS=Anopheles gambiae GN=AGAP006266 PE=4 SV=4 Length = 665
Score = 34.7 bits (78), Expect = 2.9 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 18/71 (25%) Frame = -3
Query: 495 QYQLSKPKSRPQPRVQGLKQRPLLT------------HTTKRWIPKKSLQTQTKH----- 367 QY+ SK KS PR + K T H K WIPK+ T+T+H Sbjct: 132 QYRWSKEKSEWVPREESGKAGETPTDNPYENEHYRWCHERKEWIPKQQNVTETEHYRWDE 191
Query: 366 -GQVWVPKQEP 337 WVPK P Sbjct: 192 KAAKWVPKDRP 202
>tr|A0DEX7|A0DEX7_PARTE Chromosome undetermined scaffold_48, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00016420001 PE=4 SV=1 Length = 809
Score = 34.7 bits (78), Expect = 2.9 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3
Query: 498 PQYQLSKPKSRPQPRVQGL-KQRPLLTHTTKRWIPKKSLQTQTKHGQVWVPKQEPTTK 328 PQ QL K P + Q KQ+ + +++++ IPKKS Q Q KQ+PTT+ Sbjct: 36 PQPQLVKQSKEPAKKEQEKGKQKKVNNNSSQKTIPKKSTQIPNSKKQSESKKQQPTTQ 93
>tr|A2G6C0|A2G6C0_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_371060 PE=4 SV=1 Length = 280
Score = 34.3 bits (77), Expect = 3.7 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -3
Query: 483 SKPKSRPQPRVQGLKQRPLLTHTTKRWIPKKSLQT-QTKHGQVWVPKQEPTTKQPIIAKK 307 +KPKS +P+ T K PKK+ T +K GQ PK+E + + K+ Sbjct: 190 NKPKSSEKPK------------TRKEEKPKKNESTTSSKDGQ---PKKE----EKLSFKE 230
Query: 306 WVPKKKNETAVSASP 262 W+P+K+N+T S P Sbjct: 231 WIPEKENKTTQSTEP 245
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