BP918022
Clone id YMU001_000108_F11
Library
Length 406
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCCGCAGGTGGTGAGACTAATGTCGACCTTTGGGTGGATGACCATTTGTACCCGTACAA
TCGTGTAAGCCGCTTCCATCCAACATTTAATAGCCTCTTGACATTTCTTCAATATGTTGG
GAGGAAAGAGGCATGCTTGTTAGGTTATTGCAAGCGGTTACTCATGGGTGCAAGTGATAA
TTTGCATTGGTGGATGCACCAATGTAAAGCACTTCAGCAAAATACATTGGATTTACAAGA
AAGAATTGCCTCTTTGGAGAGAGAGGTTGCAATTCTCCAACAACAAATATACAAGACGGA
TGTCAACATTCCAAAGCTTCGCAACACTATCGTGCACTTGAAAGAAACCCCCTTGATGAA
AGAGAACACAACCGTACATTTTCATCCATTGAAACACTTGTACATA
■■Homology search results ■■ -
sp_hit_id Q06VD6
Definition sp|Q06VD6|Y147_TNAVC Leucine-rich repeat structural protein ORF147 OS=Trichoplusia ni ascovirus 2c
Align length 91
Score (bit) 36.6
E-value 0.039
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918022|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F11.
(406 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q06VD6|Y147_TNAVC Leucine-rich repeat structural protein ORF1... 37 0.039
sp|Q16VW9|CCD22_AEDAE Coiled-coil domain-containing protein 22 h... 34 0.20
sp|Q9Z221|PMFBP_RAT Polyamine-modulated factor 1-binding protein... 34 0.26
sp|Q8TBY8|PMFBP_HUMAN Polyamine-modulated factor 1-binding prote... 34 0.26
sp|A8ER37|ISPDF_ARCB4 Bifunctional enzyme ispD/ispF OS=Arcobacte... 33 0.33
sp|Q8U378|Y593_PYRFU UPF0282 protein PF0593 OS=Pyrococcus furios... 33 0.44
sp|Q83JL2|YGIQ_SHIFL UPF0313 protein ygiQ OS=Shigella flexneri G... 32 0.97
sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding prote... 32 0.97
sp|Q2FQ56|PSMR_METHJ Proteasome-activating nucleotidase OS=Metha... 31 1.7
sp|Q8K2Y0|RN219_MOUSE RING finger protein 219 OS=Mus musculus GN... 30 2.8
sp|Q5U312|RAI14_RAT Ankycorbin OS=Rattus norvegicus GN=Rai14 PE=... 30 2.8
sp|Q6CEY7|NDC80_YARLI Probable kinetochore protein NDC80 OS=Yarr... 30 2.8
sp|Q9K8V6|CARX_BACHD Carbamoyl-phosphate synthase arginine-speci... 30 2.8
sp|Q46861|YGIQ_ECOLI UPF0313 protein ygiQ OS=Escherichia coli (s... 30 3.7
sp|Q8FDK9|YGIQ_ECOL6 UPF0313 protein ygiQ OS=Escherichia coli O6... 30 3.7
sp|Q8XBS7|YGIQ_ECO57 UPF0313 protein ygiQ OS=Escherichia coli O1... 30 3.7
sp|A8G243|SPEA_PROM2 Biosynthetic arginine decarboxylase OS=Proc... 30 3.7
sp|Q2TBX2|PFD3_BOVIN Prefoldin subunit 3 OS=Bos taurus GN=VBP1 P... 30 3.7
sp|P38252|YBT9_YEAST Putative uncharacterized protein YBR089W OS... 30 4.8
sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protei... 30 4.8
sp|P35900|K1C20_HUMAN Keratin, type I cytoskeletal 20 OS=Homo sa... 30 4.8
sp|Q5WWG1|GSA_LEGPL Glutamate-1-semialdehyde 2,1-aminomutase OS=... 30 4.8
sp|Q5ZVA6|GSA_LEGPH Glutamate-1-semialdehyde 2,1-aminomutase OS=... 30 4.8
sp|A5IC29|GSA_LEGPC Glutamate-1-semialdehyde 2,1-aminomutase OS=... 30 4.8
sp|Q5X529|GSA_LEGPA Glutamate-1-semialdehyde 2,1-aminomutase OS=... 30 4.8
sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens GN=FRY... 30 4.8
sp|Q13077|TRAF1_HUMAN TNF receptor-associated factor 1 OS=Homo s... 29 6.3
sp|Q86YM7|HOME1_HUMAN Homer protein homolog 1 OS=Homo sapiens GN... 29 6.3
sp|P97779|HMMR_RAT Hyaluronan-mediated motility receptor OS=Ratt... 29 6.3
sp|P32866|GPRK2_DROME G protein-coupled receptor kinase 2 OS=Dro... 29 6.3

>sp|Q06VD6|Y147_TNAVC Leucine-rich repeat structural protein ORF147
OS=Trichoplusia ni ascovirus 2c GN=ORF147 PE=1 SV=1
Length = 1481

Score = 36.6 bits (83), Expect = 0.039
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +2

Query: 59 NRVSRFHPTFNSLLTFLQYVGRKEACLLGYCKRLLMGASDNLHWWMHQCKALQQNTLDLQ 238
N + + +NSL T Y L G +NL + +CK L L L+
Sbjct: 239 NEIKQIRSKYNSLETQKDYENGD----------LFAGMEENLDAAVSRCKELFDEKLRLE 288

Query: 239 ERIASLEREVAILQQQIYKTDVNIPKLRNTI 331
I L E A+ + +I++ + +I KL+NTI
Sbjct: 289 NDIQRLMEEGAMNRDKIHRQNYDIEKLKNTI 319


>sp|Q16VW9|CCD22_AEDAE Coiled-coil domain-containing protein 22
homolog OS=Aedes aegypti GN=AAEL009388 PE=3 SV=1
Length = 589

Score = 34.3 bits (77), Expect = 0.20
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2

Query: 206 KALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLRNTIVHLKETPLMKENTTV 376
++LQ+ LQ+ I E L+ +TD +I + R TIV LKE +KE T +
Sbjct: 291 ESLQEEIDALQQEIVQHSEEGVQLESSRKETDESIEEYRKTIVRLKEEKKIKERTHI 347


>sp|Q9Z221|PMFBP_RAT Polyamine-modulated factor 1-binding protein 1
OS=Rattus norvegicus GN=Pmfbp1 PE=2 SV=2
Length = 971

Score = 33.9 bits (76), Expect = 0.26
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2

Query: 143 GYCKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLR 322
G C+ L A + L + K+LQ+N QER A LE E+ ++++ K ++ + KL+
Sbjct: 703 GTCQDDLTQALEKLTQATSETKSLQRNLQQTQERKAQLEDEIMAYEERMKKLNMELKKLQ 762


>sp|Q8TBY8|PMFBP_HUMAN Polyamine-modulated factor 1-binding protein
1 OS=Homo sapiens GN=PMFBP1 PE=2 SV=1
Length = 1022

Score = 33.9 bits (76), Expect = 0.26
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2

Query: 149 CKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLR 322
C+ L A + L+ + K+LQQ+ QE+ A LE E+ ++++ K + + KLR
Sbjct: 746 CQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLR 803


>sp|A8ER37|ISPDF_ARCB4 Bifunctional enzyme ispD/ispF OS=Arcobacter
butzleri (strain RM4018) GN=ispDF PE=3 SV=1
Length = 374

Score = 33.5 bits (75), Expect = 0.33
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3

Query: 174 VIICIGGCTNVKHFSKIHWIYKKELPLWRERLQFSNNKYTRRMSTFQSFATLSCT 338
+++C G T +H +K WI ++ PLW T+R+S+F F + T
Sbjct: 7 IVLCAGNSTRFEHKTKKQWIRVEDEPLWL--------NVTKRISSFAKFDKIIVT 53


>sp|Q8U378|Y593_PYRFU UPF0282 protein PF0593 OS=Pyrococcus furiosus
GN=PF0593 PE=3 SV=1
Length = 310

Score = 33.1 bits (74), Expect = 0.44
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +2

Query: 14 ETNVDLWVDDHLYPYNRVSRFHPTFNSL----LTFLQYVGRKEACLLGYCKRL 160
ETN +L +D H+ R + FNSL LTF +++GR+ A L Y K L
Sbjct: 235 ETNAELIIDHHIV---RDKGYEEFFNSLDKRPLTFAEFLGRENAPLEAYRKEL 284


>sp|Q83JL2|YGIQ_SHIFL UPF0313 protein ygiQ OS=Shigella flexneri
GN=ygiQ PE=3 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 0.97
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2

Query: 20 NVDLWVDDHLYPYNRVSRFHPTFNSLLTFLQYVGRKEACLLGY 148
N+ LW+ H + ++V F+P+ + T + Y G+K +GY
Sbjct: 581 NLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGY 623


>sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding protein
1 OS=Mus musculus GN=Pmfbp1 PE=2 SV=1
Length = 1022

Score = 32.0 bits (71), Expect = 0.97
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2

Query: 143 GYCKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLR 322
G C+ L A + L + K+L ++ QER A LE E+A ++++ K ++ + KL+
Sbjct: 755 GNCQDDLTQALEKLTQATSETKSLNRSLQQTQERKAQLEDEIAAYEERMKKLNMELKKLQ 814


>sp|Q2FQ56|PSMR_METHJ Proteasome-activating nucleotidase
OS=Methanospirillum hungatei (strain JF-1 / DSM 864)
GN=pan PE=3 SV=1
Length = 412

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2

Query: 164 MGASDNLHWWM-HQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLRNTIVHL 340
M D L+ ++ + ++ +L+E+I LE + ++ Q + + + KL++ I HL
Sbjct: 11 MKTPDELYRYLVDRVAGMESQNQELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHL 70

Query: 341 KETPLM 358
K PL+
Sbjct: 71 KTPPLI 76


>sp|Q8K2Y0|RN219_MOUSE RING finger protein 219 OS=Mus musculus
GN=Rnf219 PE=2 SV=2
Length = 722

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2

Query: 233 LQERIASLEREVAILQQQIYKTDVNIPKLRNTIVHLKETPLMKEN 367
LQ ++ ERE L++ + ++D I +L + + HLK + KE+
Sbjct: 222 LQSKVEQYERETNRLKKALERSDKYIEELESQVAHLKHSEEAKED 266


tr_hit_id B1QTG9
Definition tr|B1QTG9|B1QTG9_CLOBU Putative uncharacterized protein OS=Clostridium butyricum 5521
Align length 92
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918022|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_F11.
(406 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1QTG9|B1QTG9_CLOBU Putative uncharacterized protein OS=Clost... 35 1.9
tr|A4QP44|A4QP44_DANRE Zgc:162848 protein OS=Danio rerio GN=zgc:... 34 3.2
tr|B7GFX1|B7GFX1_9BACI Uncharacterized conserved protein OS=Anox... 34 3.2
tr|B7WZW7|B7WZW7_COMTE FAD dependent oxidoreductase OS=Comamonas... 34 3.2
tr|A1XCE9|A1XCE9_LEUGE DNA gyrase subunit B (Fragment) OS=Leucon... 34 4.2
tr|B3KVI9|B3KVI9_HUMAN cDNA FLJ16610 fis, clone TESTI4011532, hi... 34 4.2
tr|B2RCA2|B2RCA2_HUMAN cDNA, FLJ95932, Homo sapiens polyamine mo... 34 4.2
tr|A8PRE3|A8PRE3_MALGO Putative uncharacterized protein OS=Malas... 34 4.2
tr|Q0GKD6|Q0GKD6_DANRE TANK-binding kinase 1 OS=Danio rerio GN=t... 33 5.5
tr|A3BY70|A3BY70_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.5
tr|Q6YQ93|Q6YQ93_ONYPE Putative uncharacterized protein OS=Onion... 33 7.2
tr|A5N5X2|A5N5X2_CLOK5 CarA1 OS=Clostridium kluyveri (strain ATC... 33 7.2
tr|A0KQ72|A0KQ72_AERHH Pas:GGDEF, putative OS=Aeromonas hydrophi... 33 7.2
tr|B7Y7I9|B7Y7I9_9BACI Putative uncharacterized protein OS=Geoba... 33 7.2
tr|Q7PF19|Q7PF19_ANOGA Gustatory receptor (AGAP006716-PA) OS=Ano... 33 7.2
tr|A2DNX6|A2DNX6_TRIVA Viral A-type inclusion protein, putative ... 33 7.2
tr|Q92Y82|Q92Y82_RHIME Transcriptional regulator OS=Rhizobium me... 33 9.4
tr|A9US08|A9US08_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.4
tr|A0DR95|A0DR95_PARTE Chromosome undetermined scaffold_60, whol... 33 9.4

>tr|B1QTG9|B1QTG9_CLOBU Putative uncharacterized protein
OS=Clostridium butyricum 5521 GN=CBY_2088 PE=4 SV=1
Length = 179

Score = 35.0 bits (79), Expect = 1.9
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +2

Query: 143 GYCKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASL--------EREVAILQQQIYKT 298
GY KRL D L K L +N + L A+L +++V + IY
Sbjct: 91 GYIKRLSRSICDTLSLHGFNIKTLGENFISL----ANLGYIPKDYKKQDVKLNFPDIY-C 145

Query: 299 DVNIPKLRNTIVHLKETPLMKENTTVHFHPLK 394
D NI KLR + + + P +K+NT + +PLK
Sbjct: 146 DSNIVKLRIKSIEIWKLPTVKKNTPIQSYPLK 177


>tr|A4QP44|A4QP44_DANRE Zgc:162848 protein OS=Danio rerio
GN=zgc:162848 PE=2 SV=1
Length = 450

Score = 34.3 bits (77), Expect = 3.2
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2

Query: 152 KRLLMGASDNLHWWMHQC----KALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKL 319
+R+L G +++L QC +A Q +++ + LE +A + +QI + NI L
Sbjct: 287 ERVLQGTTEDLR---AQCDAVDRAFTQRCVEMSQAKTQLELHLAQILEQIGAQERNISHL 343

Query: 320 RNTIVHLKETPLMKENTTVHFHPLK 394
+ VH KE PL + +H+ L+
Sbjct: 344 QEA-VHDKEAPLRVAQSRLHYRTLR 367


>tr|B7GFX1|B7GFX1_9BACI Uncharacterized conserved protein
OS=Anoxybacillus flavithermus WK1 GN=Aflv_0266 PE=4 SV=1
Length = 112

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2

Query: 182 LHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLRNTIVHLKETPL 355
L+ +H+ K ++ +++R+ SLE+EV+ L+QQ+ D + L + L E L
Sbjct: 6 LYDMLHEVKVPRKKVESMEKRVDSLEKEVSSLRQQVQALDEKVQALDEKMQRLDERTL 63


>tr|B7WZW7|B7WZW7_COMTE FAD dependent oxidoreductase OS=Comamonas
testosteroni KF-1 GN=CtesDRAFT_PD3136 PE=4 SV=1
Length = 487

Score = 34.3 bits (77), Expect = 3.2
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Frame = +3

Query: 117 LGGKRHAC*VIASGYSWVQVIICIGGCTNVKHFSK-IHWIYKKELPLWRE--RLQFSNNK 287
L GKR A +I +G + VQ++ + V+HF + WI+ E P + E R +F +N+
Sbjct: 163 LDGKRIA--IIGTGSTGVQIVSALASRAKVRHFQRTAQWIFPVENPAFSEEQRAEFRSNR 220

Query: 288 ----YTRRMSTFQS 317
Y +R T+ +
Sbjct: 221 DLLVYLQREPTYMA 234


>tr|A1XCE9|A1XCE9_LEUGE DNA gyrase subunit B (Fragment)
OS=Leuconostoc gelidum GN=gyrB PE=3 SV=1
Length = 393

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2

Query: 272 ILQQQIYKTDVNIPKLRNTIVHLKETPLMKENTTVHFHP 388
I Q+Y D I ++ +IV L E P + T VHF+P
Sbjct: 30 IRDNQVYYMDFKIGRVNTSIVKLDEEPTINRGTIVHFNP 68


>tr|B3KVI9|B3KVI9_HUMAN cDNA FLJ16610 fis, clone TESTI4011532,
highly similar to Homo sapiens polyamine modulated
factor 1 binding protein 1 (PMFBP1), mRNA OS=Homo
sapiens PE=2 SV=1
Length = 882

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2

Query: 149 CKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLR 322
C+ L A + L+ + K+LQQ+ QE+ A LE E+ ++++ K + + KLR
Sbjct: 596 CQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLR 653


>tr|B2RCA2|B2RCA2_HUMAN cDNA, FLJ95932, Homo sapiens polyamine
modulated factor 1 binding protein 1(PMFBP1), mRNA
OS=Homo sapiens PE=2 SV=1
Length = 1007

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2

Query: 149 CKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLR 322
C+ L A + L+ + K+LQQ+ QE+ A LE E+ ++++ K + + KLR
Sbjct: 741 CQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLR 798


>tr|A8PRE3|A8PRE3_MALGO Putative uncharacterized protein OS=Malassezia
globosa (strain ATCC 96807 / CBS 7966) GN=MGL_0033 PE=4
SV=1
Length = 1531

Score = 33.9 bits (76), Expect = 4.2
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Frame = +2

Query: 209 ALQQNTLDLQERIASLEREVAILQQQIYKTDV---NIPKLRNTIVHLKE------TPLMK 361
AL+ QERI LE E+A LQ QI + + LRN IV L+E +
Sbjct: 1019 ALESQLHQAQERIHDLELEIATLQSQIRSLEAPESMVQSLRNEIVMLREQLSRATAENER 1078

Query: 362 ENTTVHFHPLKHL 400
TTV P H+
Sbjct: 1079 NGTTVPLGPRAHV 1091


>tr|Q0GKD6|Q0GKD6_DANRE TANK-binding kinase 1 OS=Danio rerio GN=tbk1
PE=2 SV=1
Length = 727

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2

Query: 128 EACLLGYCKRLLMGASDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVN 307
+ C + Y RL + S+ WM + ++++ L L + +SLE+EV +L Q++YK
Sbjct: 603 DECAMKY--RLFISKSEE---WMKKFHHVRKHLLSLTGQFSSLEQEVTLLMQRLYKLLEQ 657

Query: 308 IPK 316
P+
Sbjct: 658 FPQ 660


>tr|A3BY70|A3BY70_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_027992 PE=4 SV=1
Length = 711

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2

Query: 173 SDNLHWWMHQCKALQQNTLDLQERIASLEREVAILQQQIYKTDVNIPKLRNTIVHLKETP 352
S L W Q LQ++ + + +I ++RE+A + + I +V K+ TI+ + +
Sbjct: 440 SKRLEMWDRQKAKLQEDIAECKTKITQVDRELAEINKAIRNMEVFCGKVGKTIMTREIST 499

Query: 353 LMKENTTVHFHPLKH 397
+ VHF + H
Sbjct: 500 AAPRHLLVHFDAVIH 514