BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918024|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_G01.
         (421 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0V3D6|YME2_PHANO Mitochondrial escape protein 2 OS=Phaeospha...    30   3.9  
sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1    30   5.0  
sp|Q5FQP6|ISPE_GLUOX 4-diphosphocytidyl-2-C-methyl-D-erythritol ...    30   5.0  
sp|P54916|TRBH_AGRTU Conjugal transfer protein trbH OS=Agrobacte...    29   6.6  
sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2    29   6.6  

>sp|Q0V3D6|YME2_PHANO Mitochondrial escape protein 2
           OS=Phaeosphaeria nodorum GN=YME2 PE=3 SV=2
          Length = 823

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 RHNEHRQARLGESPWTEQ*PPRAAIIVLDN 402
           RH + R A L +  W E  P    ++V+DN
Sbjct: 478 RHKDDRDANLADDDWLEAHPEHRPVVVIDN 507


>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
          Length = 520

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   GSAWI*GSRAASQKRRCKVASSRRRGLP-GRLKEEPLVAKAREAGGSATDTRGAAIKALV 178
           G+AW   S      R    A  RRRG P GR +E P    +   GGS+ D  G  +    
Sbjct: 6   GAAWEEPSSGNGTAR----AGPRRRGGPAGRKRERPERCSSSSGGGSSGDEDGPELDGAP 61

Query: 179 SGRRR 193
            G +R
Sbjct: 62  GGGKR 66


>sp|Q5FQP6|ISPE_GLUOX 4-diphosphocytidyl-2-C-methyl-D-erythritol
           kinase OS=Gluconobacter oxydans GN=ispE PE=3 SV=1
          Length = 309

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 195 ALLLPETRALIAAPLVSVADPPASRAFATSGSSFRRP 85
           A +LP+   L+  P V V+ P   RAFA  G    RP
Sbjct: 172 APVLPDAGLLLVNPGVGVSTPDVFRAFAAGGGIVERP 208


>sp|P54916|TRBH_AGRTU Conjugal transfer protein trbH
           OS=Agrobacterium tumefaciens GN=trbH PE=3 SV=1
          Length = 159

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -1

Query: 280 SHAPM*TSSCCFTLLLSGCRSLH---VMAALGPP 188
           SH P   ++C  T+LLSGC+S+    ++A+  PP
Sbjct: 13  SHMPGLAAACILTVLLSGCQSIDTEGLVASNAPP 46


>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
          Length = 522

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 59  ASSRRRGLP-GRLKEEPLVAKAREAGGSATDTRGAAIKALVSGRRRA 196
           A  R+RG P GR +E P    +   GGS+ D  G  +     G +RA
Sbjct: 23  AGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRA 69

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918024|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_G01.
         (421 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1M8M1|B1M8M1_METRJ Type I secretion system ATPase OS=Methylo...    33   9.2  

>tr|B1M8M1|B1M8M1_METRJ Type I secretion system ATPase
           OS=Methylobacterium radiotolerans (strain ATCC 27329 /
           DSM 1819 / JCM 2831) GN=Mrad2831_5907 PE=3 SV=1
          Length = 587

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = -2

Query: 192 LLLPETRALIAAPLVSVADPPASRAFATSGSSFRRPGS 79
           L+LP  R LI A  +SVA P ASRA     S    PGS
Sbjct: 321 LVLPRPRGLIEAETISVAAPGASRAILEDVSFRLEPGS 358