BP918027 |
Clone id |
YMU001_000108_G05 |
Library |
YMU01 |
Length |
449 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000108_G05. |
Accession |
BP918027 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGCGGCCGCAGGAATTTTTTTTGATTACCTTTGACCGTAGTTTAAGGGAAGCTTCCGCAA TCCCTAAACTTGTGACGGCTATTCCATGTGATATAGGAACCTGTACCTGAATTTCATACA GTTCTGGCTTACCTAGAAGTAACCATAGCCCATAAGACATGACATTAGTCGTGGCAGTGC AATCTATCTCTGCTGTAAAGTTGAATTTCAGTTTCTCATGCACATCCAATGAGAATTTAA TCTTCTTGCTGGCTGCCAAGTAACTGATGTCCTCGTTTCTTTCGTTATTTTTCTTAGACT TTTGTGCCTTGAAGGCTTTGTCATCCTCTTGTATGTTGAACTTCTTTGTCATTTGACTGG TTGTAGCATGTCCCAAGTGATTACTATCTTCTGCTGTAGCTGCTTGTTGGAGTTCATTGC TAGTTTCTGACTGTGACGCCTTGATTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6WRI0 |
Definition |
sp|Q6WRI0|IGS10_HUMAN Immunoglobulin superfamily member 10 OS=Homo sapiens |
Align length |
98 |
Score (bit) |
34.3 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4Y5C1 |
Definition |
tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi |
Align length |
131 |
Score (bit) |
37.4 |
E-value |
0.38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918027|Adiantum capillus-veneris mRNA, clone: YMU001_000108_G05. (427 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragmen... 37 0.38 tr|B5ZBZ0|B5ZBZ0_UREU1 Fibronectin repeat protein OS=Ureaplasma ... 37 0.50 tr|A8WTW9|A8WTW9_CAEBR Putative uncharacterized protein (Fragmen... 37 0.65 tr|A8XM34|A8XM34_CAEBR CBR-TAG-241 protein OS=Caenorhabditis bri... 36 0.85 tr|B3XUB6|B3XUB6_UREUR Fibronectin repeat protein OS=Ureaplasma ... 35 1.9 tr|B2NFQ1|B2NFQ1_UREUR Fibronectin repeat protein OS=Ureaplasma ... 35 1.9 tr|B2NDV5|B2NDV5_UREUR Fibronectin repeat protein OS=Ureaplasma ... 35 1.9 tr|B1RY69|B1RY69_UREUR Fibronectin repeat protein OS=Ureaplasma ... 35 1.9 tr|A0NT25|A0NT25_9RHOB Flagellar M-ring protein OS=Labrenzia agg... 35 1.9 tr|Q6FVQ0|Q6FVQ0_CANGA Strain CBS138 chromosome D complete seque... 35 1.9 tr|B7FWT7|B7FWT7_PHATR Predicted protein OS=Phaeodactylum tricor... 35 2.5 tr|Q9VF37|Q9VF37_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|Q8SXH0|Q8SXH0_DROME RE56519p OS=Drosophila melanogaster GN=c(... 35 2.5 tr|B6UVQ5|B6UVQ5_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVQ4|B6UVQ4_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVQ3|B6UVQ3_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVQ2|B6UVQ2_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVQ1|B6UVQ1_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVP6|B6UVP6_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVP4|B6UVP4_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVP2|B6UVP2_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVP1|B6UVP1_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVN5|B6UVN5_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVN4|B6UVN4_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVN3|B6UVN3_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|B6UVN1|B6UVN1_DROME Crossover suppressor on 3 of Gowen OS=Dro... 35 2.5 tr|A2FDS6|A2FDS6_TRIVA Variable membrane protein, putative OS=Tr... 35 2.5 tr|B8N3Q2|B8N3Q2_ASPFL Proteasome component Prs2, putative OS=As... 35 2.5 tr|Q0TR23|Q0TR23_CLOP1 Beta-galactosidase OS=Clostridium perfrin... 34 3.2 tr|Q8MQK7|Q8MQK7_DROME GM04379p OS=Drosophila melanogaster GN=c(... 34 3.2
>tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi GN=PC000852.00.0 PE=4 SV=1 Length = 1076
Score = 37.4 bits (85), Expect = 0.38 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 7/131 (5%) Frame = -2
Query: 372 AEDSNHLGHATTSQMTKKFNIQEDDKAFKAQKSKKNNERN----EDISYLAASKKIKFSL 205 A+ N+L ++ +TK N +DD+ F + NN +N +D++ SKKIK + Sbjct: 709 AKSLNYLDYSIVKNLTKNINFIKDDE-FGQMCKENNNMKNKYIVKDLNKKHESKKIKQVV 767
Query: 204 DVHEKLKFNFTAEIDCTATTNVMSYGLWLLLGK---PELYEIQVQVPISHGIAVTSLGIA 34 E +++ E+ C N +S LL K P+L V I I+ ++ G Sbjct: 768 KKKENMEYKNNDEMCCDFRNNNIS-----LLNKSAIPQLISSNENVIIIDNISDSNCG-- 820
Query: 33 EASLKLRSKVI 1 A ++ SK+I Sbjct: 821 -AEIQTNSKLI 830
>tr|B5ZBZ0|B5ZBZ0_UREU1 Fibronectin repeat protein OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=UUR10_0551 PE=4 SV=1 Length = 5803
Score = 37.0 bits (84), Expect = 0.50 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -2
Query: 366 DSNHLGHATTSQMTKKFNIQEDDK-AFKAQKSKKNNERNEDISYLAASKKIKFSLDVHEK 190 D H T + +T + ++ + K AFK + +R ++ ++ AS KIK ++H+ Sbjct: 3958 DITHPSTETNNNVTVRVKMKNNMKSAFKGKYLALRYKRKDNNEFIWASTKIKIDENIHDD 4017
Query: 189 LKFNFT 172 L+FNFT Sbjct: 4018 LEFNFT 4023
>tr|A8WTW9|A8WTW9_CAEBR Putative uncharacterized protein (Fragment) OS=Caenorhabditis briggsae GN=CBG02617 PE=4 SV=1 Length = 423
Score = 36.6 bits (83), Expect = 0.65 Identities = 20/87 (22%), Positives = 42/87 (48%) Frame = -2
Query: 264 NERNEDISYLAASKKIKFSLDVHEKLKFNFTAEIDCTATTNVMSYGLWLLLGKPELYEIQ 85 NE ++ L K+++F LD ++ +++ W+++GKP+L + Sbjct: 313 NETKRNLRVLVNEKEVEFQLDTGSQI--------------TLINRETWIMIGKPKLEAVT 358
Query: 84 VQVPISHGIAVTSLGIAEASLKLRSKV 4 ++ ++G A+ LG A S +L+ V Sbjct: 359 NRILCANGSALRDLGQARVSFRLKGFV 385
>tr|A8XM34|A8XM34_CAEBR CBR-TAG-241 protein OS=Caenorhabditis briggsae GN=Cbr-tag-241 PE=4 SV=2 Length = 1729
Score = 36.2 bits (82), Expect = 0.85 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Frame = -2
Query: 411 QSETSNELQQAATAEDSNHLGHATTSQMTKKFNIQED--DKAFKAQKSKKNNERNEDISY 238 Q E + +L+ A + T + K+F I+ + F+A++ K N ERN + Sbjct: 882 QEERNKKLRAEAELLRKDMQDMETDKKTVKEFEIKYKKLESIFEAEREKMNGERNRSKNE 941
Query: 237 LAASKKIKFSLDVHEKLKFNFTAEIDCT 154 LAA KK+K ++ H N I T Sbjct: 942 LAAMKKMKDDVEEHLSTLHNSELRIKLT 969
>tr|B3XUB6|B3XUB6_UREUR Fibronectin repeat protein OS=Ureaplasma urealyticum serovar 12 str. ATCC 33696 GN=UUR12_A0536 PE=4 SV=1 Length = 5791
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -2
Query: 366 DSNHLGHATTSQMTKKFNIQEDDK-AFKAQKSKKNNERNEDISYLAASKKIKFSLDVHEK 190 D H T + +T + ++ + K AFK + +R ++ ++ AS KIK ++H+ Sbjct: 3958 DITHPSTETNNNVTVRVKMKNNMKSAFKGKYLALRYKRKDNNEFIWASTKIKIDENIHDD 4017
Query: 189 LKFNFT 172 L+F+FT Sbjct: 4018 LEFDFT 4023
>tr|B2NFQ1|B2NFQ1_UREUR Fibronectin repeat protein OS=Ureaplasma urealyticum serovar 11 str. ATCC 33695 GN=UUR11_0538 PE=4 SV=1 Length = 5801
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -2
Query: 366 DSNHLGHATTSQMTKKFNIQEDDK-AFKAQKSKKNNERNEDISYLAASKKIKFSLDVHEK 190 D H T + +T + ++ + K AFK + +R ++ ++ AS KIK ++H+ Sbjct: 3958 DITHPSTETNNNVTVRVKMKNNMKSAFKGKYLALRYKRKDNNEFIWASTKIKIDENIHDD 4017
Query: 189 LKFNFT 172 L+F+FT Sbjct: 4018 LEFDFT 4023
>tr|B2NDV5|B2NDV5_UREUR Fibronectin repeat protein OS=Ureaplasma urealyticum serovar 7 str. ATCC 27819 GN=UUR7_0550 PE=4 SV=1 Length = 5800
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -2
Query: 366 DSNHLGHATTSQMTKKFNIQEDDK-AFKAQKSKKNNERNEDISYLAASKKIKFSLDVHEK 190 D H T + +T + ++ + K AFK + +R ++ ++ AS KIK ++H+ Sbjct: 3958 DITHPSTETNNNVTVRVKMKNNMKSAFKGKYLALRYKRKDNNEFIWASTKIKIDENIHDD 4017
Query: 189 LKFNFT 172 L+F+FT Sbjct: 4018 LEFDFT 4023
>tr|B1RY69|B1RY69_UREUR Fibronectin repeat protein OS=Ureaplasma urealyticum serovar 13 str. ATCC 33698 GN=UUR13_0013 PE=4 SV=1 Length = 5783
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -2
Query: 366 DSNHLGHATTSQMTKKFNIQEDDK-AFKAQKSKKNNERNEDISYLAASKKIKFSLDVHEK 190 D H T + +T + ++ + K AFK + +R ++ ++ AS KIK ++H+ Sbjct: 3958 DITHPSTETNNNVTVRVKMKNNMKSAFKGKYLALRYKRKDNNEFIWASTKIKIDENIHDD 4017
Query: 189 LKFNFT 172 L+F+FT Sbjct: 4018 LEFDFT 4023
>tr|A0NT25|A0NT25_9RHOB Flagellar M-ring protein OS=Labrenzia aggregata IAM 12614 GN=fliF PE=4 SV=1 Length = 548
Score = 35.0 bits (79), Expect = 1.9 Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = -2
Query: 369 EDSNHLGHATTSQMTKKFNIQEDD-KAFKAQKSKKNNERNED-ISYLAASKKIKFSLDVH 196 E+ N + ++ T + N+ E+D A ++S + NER E+ ++Y +SK+I+ S D + Sbjct: 293 ENENAQNSSVSAPTTVEQNLPEEDVSADNGERSSEENERREETVNYEISSKRIETSQDGY 352
Query: 195 EKLKFNFTAEIDCTATTNVMSYGLWLLLGKPELYEIQVQVPISHGIAVTSLGI 37 + + +D + + G+P ++Q Q+ + +S GI Sbjct: 353 RVDRLSIAVLVDKSRLAQSLG-------GEPTQAQMQEQLTEIEALVASSAGI 398
>tr|Q6FVQ0|Q6FVQ0_CANGA Strain CBS138 chromosome D complete sequence OS=Candida glabrata GN=CAGL0D06644g PE=4 SV=1 Length = 900
Score = 35.0 bits (79), Expect = 1.9 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Frame = -2
Query: 414 SQSETSNELQQAATAEDSNH--LGHATTSQMTKKFNIQEDD----KAFKAQKSKKNNERN 253 S S S+ +Q+ E+ N + +AT Q +KK+N DD +AF + + N N Sbjct: 55 SNSSNSDSVQRGNQMENENENSVMYATVQQRSKKYNSSNDDIPQFRAFLGNPNDQQNHNN 114
Query: 252 EDISYLAASKKIKFSLDVHEKL 187 ++ S I +++ ++L Sbjct: 115 THVTMDLTSSNINNDIEIRKEL 136
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