BP918033 [AcEST]

BP918033
Clone id	YMU001_000108_G11
Library	YMU01
Length	528
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000108_G11.
Accession	BP918033
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CCATGATGGGAATCCAAGATATACATGCTTCCAGAAATGTCGGGTTCGACAATTAGACAA TCCCACCAACCTGGCTACCACACATATATCAAGCATACAAGTCTTCTAGTGTACTCTCAA GCACAAACTTCTCTGCCAAATTCTGTATGGAAAGAGAATACAAGTGCTAAACTACTCCTT TGAGCATCATGAACCATGTTGTTAACTTGCTGCAAAGGGCTAGATCAAGTCACTGTGGGT TCCATCTGAAAGGTTTCAAGATATAGTTGCAATAGCCGAGGTGCATCAAGTTTCAACCAA TCCAGACTCTTCTAACCATTTAGCATCCAAAGATGGATAATTCTTGAGCTTCACCACACA ACGTCTTGCAACCTCTCCTCTAATCTTCCTCTCCTTATGTGCCAATTTATGTTCAAGAAC AAGAATCTCACCCAATTCTTCCACTTCGGGTTCTTCCTCATCAAGCATATTCTCTAGCAC ATCACCAATACCAACAAAGGGCCTTAGAAGGTTGACATGAAAAGCATT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q54RS7
Definition	sp\|Q54RS7\|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum
Align length	37
Score (bit)	29.6
E-value	8.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918033\|Adiantum capillus-veneris mRNA, clone: YMU001_000108_G11. (515 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q54RS7\|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyo... 30 8.7 >sp\|Q54RS7\|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1 Length = 618 Score = 29.6 bits (65), Expect = 8.7 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +1 Query: 46 STIRQSHQPGYHTYIKHTSLLVYSQAQTSLPNSVWKE 156 STI +S P + Y+KH L+Y + + + +WK+ Sbjct: 373 STIYESTNPDHEEYLKHLWSLLYPEQEFQKKSPLWKK 409
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0XBC3
Definition	tr\|B0XBC3\|B0XBC3_CULQU Zinc finger protein OS=Culex quinquefasciatus
Align length	46
Score (bit)	33.5
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918033\|Adiantum capillus-veneris mRNA, clone: YMU001_000108_G11. (515 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0XBC3\|B0XBC3_CULQU Zinc finger protein OS=Culex quinquefasci... 33 6.4 tr\|B0WW21\|B0WW21_CULQU Zinc finger protein OS=Culex quinquefasci... 33 6.4 >tr\|B0XBC3\|B0XBC3_CULQU Zinc finger protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ016789 PE=4 SV=1 Length = 596 Score = 33.5 bits (75), Expect = 6.4 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 351 SPHNVLQPLLSSSPYVPIYVQEQESHPILPLRVLPHQAYSLAHHQ 488 S H P L +PI++Q+Q SH ++ + PHQ + HHQ Sbjct: 517 STHQQQHPSLQQQHNGLPIHLQQQLSHHLISSHLPPHQDHQDLHHQ 562 >tr\|B0WW21\|B0WW21_CULQU Zinc finger protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ010459 PE=4 SV=1 Length = 218 Score = 33.5 bits (75), Expect = 6.4 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 351 SPHNVLQPLLSSSPYVPIYVQEQESHPILPLRVLPHQAYSLAHHQ 488 S H P L +PI++Q+Q SH ++ + PHQ + HHQ Sbjct: 139 STHQQQHPSLQQQHNGLPIHLQQQLSHHLISSHLPPHQDHQDLHHQ 184