BP918038
Clone id YMU001_000108_H08
Library
Length 380
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000108_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGGTCGGGGCACGATCAAACACAGCTGTGTATCCTTCATAATTGGAAGAGGCTTCTAAA
TTCCAAGCGCCAAACTTGGGAAAAGAGACATGCCTAATTCGCTGCAAATTTAATGTTCCA
ACACAAACAAGTGTACAGTAAGAACTCACACAGAATCTCTCAGCGATGATGCCAAATAAT
GATTCAAACCTTGGGCTCAGAGTGCGAACAATTAGTATCATCAATATCCGCGTCCAATAA
ATACCTCAGGTGCATAGTGTCCCAGCCGGTACGCCCGTGCCCTCAGTTAGCGCCCTGGGG
CATTTGGCTGATCACTAGTTGGCGGCCGGTAGCTGCCTGCTGTATGAAGCCTGCGCCTGC
GTGGGGGAATGATGATATGT
■■Homology search results ■■ -
sp_hit_id O70394
Definition sp|O70394|I27RA_MOUSE Interleukin-27 receptor subunit alpha OS=Mus musculus
Align length 61
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918038|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_H08.
(380 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O70394|I27RA_MOUSE Interleukin-27 receptor subunit alpha OS=M... 31 1.7
sp|Q9USQ2|ALP6_SCHPO Spindle pole body component alp6 OS=Schizos... 30 4.8
sp|Q25417|ALDH2_LEITA Aldehyde dehydrogenase, mitochondrial OS=L... 30 4.8
sp|Q62217|SEM5A_MOUSE Semaphorin-5A OS=Mus musculus GN=Sema5a PE... 29 8.2

>sp|O70394|I27RA_MOUSE Interleukin-27 receptor subunit alpha OS=Mus
musculus GN=Il27ra PE=2 SV=1
Length = 623

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +2

Query: 194 GSECEQLVSSISASNKYLRCIVSQPVRPCPQLAPWGIWL----ITSWRPVAACCMKPAPA 361
G+ CE S K +V + RPC Q+ + +W IT+ + CC P PA
Sbjct: 234 GTVCE-------TSGKRAALLVWKDPRPCVQVT-YTVWFGAGDITTTQEEVPCCKSPVPA 285

Query: 362 W 364
W
Sbjct: 286 W 286


>sp|Q9USQ2|ALP6_SCHPO Spindle pole body component alp6
OS=Schizosaccharomyces pombe GN=alp6 PE=1 SV=2
Length = 832

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3

Query: 279 HGRTGWDTMHLRYLLDADID---DTNCSHSEPKV*IIIW 172
HG TGWD L Y +D+ I+ CS K+ +W
Sbjct: 578 HGETGWDVFTLEYKVDSPINVIITPYCSRQYLKIFNFLW 616


>sp|Q25417|ALDH2_LEITA Aldehyde dehydrogenase, mitochondrial
OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1
Length = 498

Score = 29.6 bits (65), Expect = 4.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2

Query: 233 SNKYLRCIVSQPVRPCPQLAPWGIWLITSWRPVAACCMKPAPAWGN 370
S +L + QP+ C Q+ PW L+ +AA + PA A GN
Sbjct: 144 SGNFLGIVKRQPIGVCGQIIPWNFPLL-----MAAFKLSPALAMGN 184


>sp|Q62217|SEM5A_MOUSE Semaphorin-5A OS=Mus musculus GN=Sema5a PE=2
SV=1
Length = 1077

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 11/46 (23%)
Frame = +2

Query: 269 VRPCPQLAPWGIWLITSWRPVAACC-----------MKPAPAWGND 373
+ PCP W W +SW +A C PAPA+G D
Sbjct: 835 ILPCPVDGVWSCW--SSWSKCSATCGGGHYMRTRSCSNPAPAYGGD 878


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918038|Adiantum capillus-veneris mRNA, clone:
YMU001_000108_H08.
(380 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******