BP918039 |
Clone id |
YMU001_000108_H09 |
Library |
YMU01 |
Length |
317 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000108_H09. |
Accession |
BP918039 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1538Contig1 |
Sequence |
GAATGGAGCTGTCCCCCATTTCTTGCATATGATGGTCACTAGTTTCTTCAGCTTGACCAT CTTTACCATTCAGACCATCTTCCGTCTTACTCTGGCTCGTAAAGTCTGTGTGACAATTCT TTGGAGAAGTTTCACAGCTATGATCAGTATCTGAATCCACCAGGCAGGTCACTCTTCTCC GTGTTCGAGATGAAACCCCTGCCTGTGTATCCTTCTCCATGGGCACTTTGCCCTTCGCTG GCCCTTGCTTGCTTTTCCGTCTTATCCTCTTTTCAGATCCATCAGGCGATGTTGACGGGG ATAGTTGCGCCTTCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2RUV9 |
Definition |
sp|A2RUV9|AEBP1_RAT Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus |
Align length |
91 |
Score (bit) |
35.4 |
E-value |
0.088 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54BM0 |
Definition |
tr|Q54BM0|Q54BM0_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum |
Align length |
99 |
Score (bit) |
40.4 |
E-value |
0.044 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918039|Adiantum capillus-veneris mRNA, clone: YMU001_000108_H09. (317 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54BM0|Q54BM0_DICDI Putative uncharacterized protein OS=Dicty... 40 0.044 tr|A7PEN3|A7PEN3_VITVI Chromosome chr11 scaffold_13, whole genom... 38 0.29 tr|Q28DL3|Q28DL3_XENTR Suppressor of cytokine signaling 5 OS=Xen... 37 0.49 tr|Q5GAK9|Q5GAK9_9VIRU Neurofilament triplet H1 protein OS=Group... 37 0.49 tr|A5E7E2|A5E7E2_LODEL Putative uncharacterized protein OS=Lodde... 37 0.49 tr|B6NLF9|B6NLF9_BRAFL Putative uncharacterized protein OS=Branc... 36 0.84 tr|A9S1U0|A9S1U0_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.1 tr|A5BPA1|A5BPA1_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5WW42|A5WW42_DANRE Novel protein similar to vertebrate human... 35 2.4 tr|A3W0R4|A3W0R4_9RHOB Voltage-gated sodium channel OS=Roseovari... 35 2.4 tr|Q7XTZ4|Q7XTZ4_ORYSJ OSJNBa0019K04.3 protein OS=Oryza sativa s... 35 2.4 tr|Q01JX1|Q01JX1_ORYSA OSIGBa0147H17.2 protein OS=Oryza sativa G... 35 2.4 tr|A2XWL7|A2XWL7_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.4 tr|B7FJB8|B7FJB8_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2 tr|B7YZV6|B7YZV6_DROME Scm-related gene containing four mbt doma... 34 3.2 tr|B4IEF7|B4IEF7_DROSE GM25834 OS=Drosophila sechellia GN=GM2583... 34 3.2 tr|Q90Z51|Q90Z51_CHICK Breast and ovarian cancer susceptibility-... 34 4.2 tr|Q5YFP3|Q5YFP3_9VIRU Putative uncharacterized protein OS=Singa... 34 4.2 tr|A4HFN4|A4HFN4_LEIBR Putative uncharacterized protein OS=Leish... 33 5.4 tr|Q1DR65|Q1DR65_COCIM Putative uncharacterized protein OS=Cocci... 33 5.4 tr|B8MQL8|B8MQL8_9EURO Putative uncharacterized protein OS=Talar... 33 5.4 tr|A2QYN9|A2QYN9_ASPNC Similarity to hypothetical protein Pa5G00... 33 5.4 tr|Q6M0J5|Q6M0J5_METMP Putative uncharacterized protein OS=Metha... 33 5.4 tr|B4Q4C3|B4Q4C3_DROSI GD22084 OS=Drosophila simulans GN=GD22084... 33 9.3 tr|B4J2P8|B4J2P8_DROGR GH16022 OS=Drosophila grimshawi GN=GH1602... 33 9.3 tr|B4IXY0|B4IXY0_DROGR GH15157 OS=Drosophila grimshawi GN=GH1515... 33 9.3 tr|A7RF40|A7RF40_NEMVE Predicted protein OS=Nematostella vectens... 33 9.3
>tr|Q54BM0|Q54BM0_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0192009 PE=4 SV=1 Length = 527
Score = 40.4 bits (93), Expect = 0.044 Identities = 28/99 (28%), Positives = 47/99 (47%) Frame = -2
Query: 301 SPSTSPDGSEKRIRRKSKQGPAKGKVPMEKDTQAGVSSRTRRRVTCLVDSDTDHSCETSP 122 S S+SP SE + + K K + E+ + + S ++ + DSD+D S E Sbjct: 365 SESSSPASSESK--EEEKMDIEKEETKKEESSSSSSESEEEQKKSKKEDSDSDESSEDEK 422
Query: 121 KNCHTDFTSQSKTEDGLNGKDGQAEETSDHHMQEMGDSS 5 K + +S S++ED +D +E + D +E DSS Sbjct: 423 KK--EESSSSSESEDEKKKEDSDSESSEDEKKKEDSDSS 459
>tr|A7PEN3|A7PEN3_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016727001 PE=4 SV=1 Length = 856
Score = 37.7 bits (86), Expect = 0.29 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = -2
Query: 271 KRIRRKSKQGPAKGKVPMEKDTQAGVSSRTRRRVTCLVDSDTDHSCETSPKNCHTDFTSQ 92 K + RKS++ AK K + +AGVS + + ++D D+ + +P N T + Sbjct: 454 KELVRKSEEKEAKTKEKASNEMKAGVSVNQKAQKKEMIDKKADNIQKATPTNRRRKTTEE 513
Query: 91 SKTEDGLNGKDGQAEETS 38 S + ++ QAE TS Sbjct: 514 SVKSNNVSKSQDQAEVTS 531
>tr|Q28DL3|Q28DL3_XENTR Suppressor of cytokine signaling 5 OS=Xenopus tropicalis GN=socs5 PE=2 SV=1 Length = 535
Score = 37.0 bits (84), Expect = 0.49 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 11/114 (9%) Frame = -2
Query: 310 AQLSPSTSPDGSEKRIRRKSKQGPAKGKVPMEKDTQAGVSSRTR--RRVTCLVDSDT--- 146 ++LSPS+S S +R + + P ++ +E+D +G+S+ TR RR DS T Sbjct: 66 SELSPSSS---SSRRNQNCVSEMPQLVEISVERDNDSGLSAGTRLARR-----DSYTRHA 117
Query: 145 ------DHSCETSPKNCHTDFTSQSKTEDGLNGKDGQAEETSDHHMQEMGDSSI 2 HSC T +N +T GL ++ + S H M+ +G ++ Sbjct: 118 PWGGKKKHSCSTKTQNSFDPDKKICRTRSGLQRRERRHGANSVHDMETIGSRAV 171
>tr|Q5GAK9|Q5GAK9_9VIRU Neurofilament triplet H1 protein OS=Grouper iridovirus GN=GIV07 PE=4 SV=1 Length = 178
Score = 37.0 bits (84), Expect = 0.49 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -2
Query: 289 SPDGSEKRIRRKS---KQGPAKGKVPMEKDTQAGVSSRTRRRVTCLVDSDTDHSCETSPK 119 SP + RRKS ++ PA+ K P + + A S T R+ S T T+P Sbjct: 84 SPTSRKSPARRKSPTSRKSPARRKSPTSRKSPARRKSPTSRKSPARGRSPTRRKTPTTPS 143
Query: 118 NCHTDFTSQSKTEDGLNGKDGQAEE 44 C T + S K+ K A + Sbjct: 144 KCPTSYPSSMKSGSSRRSKSSSASK 168
>tr|A5E7E2|A5E7E2_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_05531 PE=4 SV=1 Length = 541
Score = 37.0 bits (84), Expect = 0.49 Identities = 25/70 (35%), Positives = 36/70 (51%) Frame = +1
Query: 67 HSDHLPSYSGS*SLCDNSLEKFHSYDQYLNPPGRSLFSVFEMKPLPVYPSPWALCPSLAL 246 H+ P+Y S S C+ S++K S+ Q +NPPG +L +KP+ V P LC L Sbjct: 240 HNKSYPTYEESLSECEESMQKIISHCQMVNPPGETL-----VKPI-VTPRFAPLCSKEML 293
Query: 247 ACFSVLSSFQ 276 LS+ Q Sbjct: 294 RYLGRLSNEQ 303
>tr|B6NLF9|B6NLF9_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_127996 PE=4 SV=1 Length = 2341
Score = 36.2 bits (82), Expect = 0.84 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = -2
Query: 313 KAQLSPSTSPDGSEKRIRRKSKQGPAKGKVPM-EKDTQAGVSSRTRRRVTCLVDSDTDHS 137 K SPS+S + EK+ R+ + G KG + ++ SRTR R S++ S Sbjct: 550 KKHESPSSSREPREKKRDRERRSGSRKGSSSKDDSKSERHERSRTRSR------SESCSS 603
Query: 136 CETSPKNCHTDFTSQSKTEDGLN------GKDGQAEETSDHH 29 +TSP N H+ +SKT+ + + E TSD H Sbjct: 604 SKTSPHNDHSRNREKSKTKSDSSEIKREPETSRRRESTSDKH 645
>tr|A9S1U0|A9S1U0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207810 PE=4 SV=1 Length = 878
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 17/117 (14%) Frame = -2
Query: 301 SPSTSPDGSEKRIRRKSKQGPAKGK--------VPMEKDTQAG---------VSSRTRRR 173 S S S G +K+ +K K+ + K VP+ KD + SRT+ Sbjct: 173 SDSASKHGKQKQGSKKEKKASVEMKTVETFSRRVPINKDPVLKDETLTDLDYLKSRTKSG 232
Query: 172 VTCLVDSDTDHSCETSPKNCHTDFTSQSKTEDGLNGKDGQAEETSDHHMQEMGDSSI 2 D D D S + + + D T+ SK +D +G++ E D M + D+ + Sbjct: 233 AWSDDDDDDDASDKDAALDDANDLTTSSKEDDDEDGEEEDESEVEDEEMNDAADNVV 289
>tr|A5BPA1|A5BPA1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020518 PE=4 SV=1 Length = 808
Score = 35.8 bits (81), Expect = 1.1 Identities = 21/78 (26%), Positives = 36/78 (46%) Frame = -2
Query: 271 KRIRRKSKQGPAKGKVPMEKDTQAGVSSRTRRRVTCLVDSDTDHSCETSPKNCHTDFTSQ 92 K + RKS++ AK K +AG S + + ++D D+ + +P N T + Sbjct: 405 KELVRKSEEKEAKTKEKASNXMKAGXSVNQKXQXKEMIDKKADNIQKATPTNRRRKTTEZ 464
Query: 91 SKTEDGLNGKDGQAEETS 38 S + ++ QAE TS Sbjct: 465 SVKSNNVSKSQDQAEVTS 482
>tr|A5WW42|A5WW42_DANRE Novel protein similar to vertebrate human immunodeficiency virus type I enhancer binding protein 1 (HIVEP1) (Fragment) OS=Danio rerio GN=DKEY-31K9.2-001 PE=4 SV=1 Length = 2620
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2
Query: 187 RTRRRVTCLVDSDTDHSCETSPKNCHTDFTSQSKTEDGLNGKDGQAEETSDHHMQEMGDS 8 R RR++ + D D ET+P + +SQS T G T+ HH Q +G+S Sbjct: 956 RKRRKIKSVGDDDDQSPTETTPPCSRSFDSSQSST--------GSIGRTNSHHTQSLGNS 1007
Query: 7 SI 2 +I Sbjct: 1008 AI 1009
>tr|A3W0R4|A3W0R4_9RHOB Voltage-gated sodium channel OS=Roseovarius sp. 217 GN=ROS217_05514 PE=4 SV=1 Length = 306
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 13/60 (21%) Frame = +1
Query: 133 HSYDQYLNPPGRSLFSVFEMKPL------------PVYPSPWA-LCPSLALACFSVLSSF 273 +S+D++ GRSL+S+F++ L VYP WA P + + FSVL+ F Sbjct: 187 NSFDEWFGTLGRSLYSLFQIMTLESWSMGIVRPVMEVYPMAWAFFVPFIVITAFSVLNLF 246
|