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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918043
Clone id YMU001_000109_A02
Library
Length 493
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATTCGCGGCCGCAAATCTTCCAGTTTTTTTTTGAGAAGGTTGATAAACAACAATGAAAT
AATTGATTGATTAGTGCCCAATATACAGTTAGCTTTTGATTTCTAATAATTTCTACAAAA
ATGGTAAGATCTGCAAAAGATCAAAGCTCTCAACATTTTCCCCGCAGTACAATAGGACCA
ATCCAAGTACTAAACATATTGCTTAAAGCTAGTAGAACATCTCCTGAACCATGTTCACAG
CTGATCAAGCTTGCAAGGAGAGGAAAGAATTGTTTTAAGTATTTTTCAACAGTGTCATCT
TTTAGCCCGCTGATCGCTTGCAAAGTAGCCACGACCAAAGGACCTCGAGATGCTAATTCT
CGTCTCCTTGAAGAACCTATTGGGATTTTCCAACCACTTCCAGTTGCAGGCTGTTCTGTT
AGATGCAGACTATGATAAGGACCTGCTGTAGCCGTGTTTAAATACACCTGTAGAACCTCT
TCACAAAGCTCTA
■■Homology search results ■■ -
sp_hit_id Q9UT02
Definition sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe
Align length 68
Score (bit) 33.5
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918043|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A02.
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizos...    33   0.49 
sp|Q4IBR4|HIR1_GIBZE Protein HIR1 OS=Gibberella zeae GN=HIR1 PE=...    30   4.2  
sp|Q9Z8N1|PHSG_CHLPN Glycogen phosphorylase OS=Chlamydia pneumon...    30   5.4  
sp|Q2GSJ9|HIR1_CHAGB Protein HIR1 OS=Chaetomium globosum GN=HIR1...    29   9.3  

>sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71
            OS=Schizosaccharomyces pombe GN=sec71 PE=1 SV=1
          Length = 1811

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 17/68 (25%), Positives = 37/68 (54%)
 Frame = -3

Query: 375  GWKIPIGSSRRRELASRGPLVVATLQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDV 196
            G++  IG +  + +A+  P++ A +  I+ L +    +   +F+ LL ++++C H    +
Sbjct: 1739 GFQRVIGDNPVKGVAAFQPVIAALVSYINSLDEIQFSRGKSEFYQLLCAIVACGHIDQQL 1798

Query: 195  LLALSNMF 172
              +LSN F
Sbjct: 1799 GTSLSNAF 1806


>sp|Q4IBR4|HIR1_GIBZE Protein HIR1 OS=Gibberella zeae GN=HIR1 PE=3
           SV=1
          Length = 1046

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 262 ILKTILSSPCKLDQL*TWFRRCSTS 188
           +L+T +SSP K   L T+FRRCS S
Sbjct: 217 VLETTISSPFKSSPLTTYFRRCSWS 241


>sp|Q9Z8N1|PHSG_CHLPN Glycogen phosphorylase OS=Chlamydia pneumoniae
           GN=glgP PE=3 SV=1
          Length = 824

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
 Frame = -2

Query: 370 ENPNRFFKE----TRISISRSFGRGYFASDQ 290
           EN N+ FKE    T+ISI  + G G+F+SD+
Sbjct: 772 ENVNKLFKEPDSWTKISIYNTAGMGFFSSDR 802


>sp|Q2GSJ9|HIR1_CHAGB Protein HIR1 OS=Chaetomium globosum GN=HIR1
           PE=3 SV=1
          Length = 1080

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 262 ILKTILSSPCKLDQL*TWFRRCSTS 188
           +L+T +S+P K   L T+FRRCS S
Sbjct: 219 VLETTISAPFKSSPLTTYFRRCSWS 243
tr_hit_id A9RIC5
Definition tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 110
Score (bit) 136.0
E-value 6.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918043|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A02.
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella paten...   136   6e-31
tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella paten...   135   1e-30
tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2 ...   132   7e-30
tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subs...   132   7e-30
tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza...   132   7e-30
tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza...   132   7e-30
tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genom...   117   4e-25
tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like p...   102   1e-20
tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana G...    98   2e-19
tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome ...    92   2e-17
tr|A5BCF2|A5BCF2_VITVI Putative uncharacterized protein OS=Vitis...    92   2e-17
tr|Q7F8R6|Q7F8R6_ORYSJ Putative guanine nucleotide-exchange prot...    79   1e-13
tr|Q0E352|Q0E352_ORYSJ Os02g0193800 protein (Fragment) OS=Oryza ...    79   1e-13
tr|B8AJA2|B8AJA2_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|B7F1A4|B7F1A4_ORYSJ cDNA clone:002-143-A05, full insert seque...    79   1e-13
tr|A3A429|A3A429_ORYSJ Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|Q69XU9|Q69XU9_ORYSJ Putative guanine nucleotide-exchange prot...    76   7e-13
tr|Q0DAV8|Q0DAV8_ORYSJ Os06g0622800 protein (Fragment) OS=Oryza ...    76   7e-13
tr|B8B4P5|B8B4P5_ORYSI Putative uncharacterized protein OS=Oryza...    76   7e-13
tr|B7EZC9|B7EZC9_ORYSJ cDNA clone:002-103-F09, full insert seque...    76   7e-13
tr|Q9SZM0|Q9SZM0_ARATH Guanine nucleotide-exchange protein-like"...    75   1e-12
tr|Q0WUF1|Q0WUF1_ARATH Guanine nucleotide-exchange protein-like ...    75   1e-12
tr|O65490|O65490_ARATH Putative uncharacterized protein AT4g3538...    64   4e-09
tr|A3BDN8|A3BDN8_ORYSJ Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|A8J189|A8J189_CHLRE SEC7/BIG-like ARF-guanine nucleotide exch...    52   1e-05
tr|A7PDN2|A7PDN2_VITVI Chromosome chr11 scaffold_13, whole genom...    43   0.007
tr|A5AI73|A5AI73_VITVI Putative uncharacterized protein OS=Vitis...    43   0.007
tr|Q7F2A7|Q7F2A7_ORYSJ Os07g0564700 protein OS=Oryza sativa subs...    42   0.015
tr|A3BL75|A3BL75_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.015
tr|A2XXG5|A2XXG5_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015

>tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_175154 PE=4 SV=1
          Length = 1755

 Score =  136 bits (342), Expect = 6e-31
 Identities = 69/110 (62%), Positives = 85/110 (77%)
 Frame = -3

Query: 471  ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292
            ELCEEVLQ+Y++ +T+        T+       W IP+GS+RRREL SR PLVVATLQA+
Sbjct: 1653 ELCEEVLQLYISISTS--------TDDSIQKPKWVIPLGSARRRELVSRAPLVVATLQAV 1704

Query: 291  SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+
Sbjct: 1705 SGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQ 1754


>tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_223615 PE=4 SV=1
          Length = 1749

 Score =  135 bits (340), Expect = 1e-30
 Identities = 68/112 (60%), Positives = 86/112 (76%)
 Frame = -3

Query: 471  ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292
            ELCEEVL++Y+  +T+        T++      W +P+GSSRRREL SR PLVVATLQA+
Sbjct: 1645 ELCEEVLRLYIAISTS--------TDESIQKPRWVVPLGSSRRRELVSRAPLVVATLQAV 1696

Query: 291  SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGK 136
            SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+ +
Sbjct: 1697 SGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQAQ 1748


>tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2
            OS=Oryza sativa GN=GEP2 PE=2 SV=1
          Length = 1789

 Score =  132 bits (333), Expect = 7e-30
 Identities = 68/109 (62%), Positives = 83/109 (76%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            LC+EVL+VYL+TA         L+  P     W IP+GSS+RRELA+R PLVV+TLQAIS
Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+
Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787


>tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subsp.
            japonica GN=Os03g0246800 PE=4 SV=1
          Length = 1789

 Score =  132 bits (333), Expect = 7e-30
 Identities = 68/109 (62%), Positives = 83/109 (76%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            LC+EVL+VYL+TA         L+  P     W IP+GSS+RRELA+R PLVV+TLQAIS
Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+
Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787


>tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_10738 PE=4 SV=1
          Length = 1789

 Score =  132 bits (333), Expect = 7e-30
 Identities = 68/109 (62%), Positives = 83/109 (76%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            LC+EVL+VYL+TA         L+  P     W IP+GSS+RRELA+R PLVV+TLQAIS
Sbjct: 1684 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1738

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+
Sbjct: 1739 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787


>tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_009742 PE=4 SV=1
          Length = 1803

 Score =  132 bits (333), Expect = 7e-30
 Identities = 68/109 (62%), Positives = 83/109 (76%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            LC+EVL+VYL+TA         L+  P     W IP+GSS+RRELA+R PLVV+TLQAIS
Sbjct: 1698 LCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAIS 1752

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            GL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+
Sbjct: 1753 GLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1801


>tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00026361001
            PE=4 SV=1
          Length = 1653

 Score =  117 bits (292), Expect = 4e-25
 Identities = 60/110 (54%), Positives = 76/110 (69%)
 Frame = -3

Query: 471  ELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAI 292
            +LC EVLQ Y+ TA +G      L  QP     W IP+GS +RRELA+R PLVV TLQA+
Sbjct: 1546 DLCHEVLQFYVETARSGQIPESSLGVQPR----WLIPLGSGKRRELATRAPLVVVTLQAV 1601

Query: 291  SGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
             GL D + E+ L QFFPLL+SLI CEHGS +V +ALS M  + +GP++LR
Sbjct: 1602 CGLGDTSFERNLAQFFPLLSSLIGCEHGSNEVQVALSEMLRSSVGPVLLR 1651


>tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like
            protein OS=Arabidopsis thaliana GN=T4C21_270 PE=4 SV=1
          Length = 1793

 Score =  102 bits (254), Expect = 1e-20
 Identities = 51/109 (46%), Positives = 75/109 (68%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            +C+EVL  Y+ T+++     L      A+   W+IP+GS +RREL++R PL+VATLQA+ 
Sbjct: 1685 ICQEVLNFYIETSSSAK--KLQSESSRASEYRWRIPLGSGKRRELSARAPLIVATLQAMC 1742

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
             L + + EK LK  FPLLA+LISCEHGS +V  AL++M    +GP++L+
Sbjct: 1743 TLDEASFEKNLKCLFPLLANLISCEHGSNEVQTALADMLGLSVGPVLLQ 1791


>tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana
            GN=At1g01960 PE=4 SV=1
          Length = 1750

 Score = 97.8 bits (242), Expect = 2e-19
 Identities = 49/112 (43%), Positives = 72/112 (64%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            LC EVL+ Y+N + +         EQ    S W +P GS +++EL +R PLVVA +Q + 
Sbjct: 1650 LCREVLEFYINISCS--------KEQ---SSRWAVPSGSGKKKELTARAPLVVAAIQTLG 1698

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGKC 133
             + +   +K L + FPL+A+LISCEHGSG+V +ALS+M  T +GP++LR  C
Sbjct: 1699 NMGESLFKKNLPELFPLIATLISCEHGSGEVQVALSDMLQTSMGPVLLRSCC 1750


>tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00036299001
            PE=4 SV=1
          Length = 1642

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 47/109 (43%), Positives = 68/109 (62%)
 Frame = -3

Query: 468  LCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVATLQAIS 289
            +CE++LQ+YLN A          + QP     W +P+GS+++ ELA+R  L V+ LQ + 
Sbjct: 1536 VCEKILQIYLNCAGLQNAPQKQ-SSQPVLH--WILPLGSAQKDELAARTSLAVSALQVLG 1592

Query: 288  GLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 142
            GL  D+  KY+ QFFPLL  L+  EH SGD+   LS MF + IGPI+++
Sbjct: 1593 GLGTDSFRKYISQFFPLLVDLVRSEHSSGDIQRVLSYMFQSCIGPIIMK 1641