BP918044
Clone id YMU001_000109_A03
Library
Length 150
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATAACTCAAAAGATTTCTGTCTTCCAATGGAAGATCAGATTCAGTCGTTAACCACTTGGA
TTTCTGAATTCCTGATGCAATCCTTTCAGACCTGAACTTTGCTCCTCTCTTCAACAATGA
TGCAACCTCTTTGTCTGTCAAATTATACTC
■■Homology search results ■■ -
sp_hit_id P17697
Definition sp|P17697|CLUS_BOVIN Clusterin OS=Bos taurus
Align length 45
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918044|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A03.
(150 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P17697|CLUS_BOVIN Clusterin OS=Bos taurus GN=CLU PE=1 SV=1 29 8.5

>sp|P17697|CLUS_BOVIN Clusterin OS=Bos taurus GN=CLU PE=1 SV=1
Length = 439

Score = 28.9 bits (63), Expect = 8.5
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = -1

Query: 141 LTDKEVASLLKRGAKFRSERIASGIQKSKWLTTESDLPLEDRNLL 7
++DKE+ + G+K+ ++ I + +++ K + T+ + E+R LL
Sbjct: 20 ISDKELQEMSTEGSKYVNKEIKNALKEVKQIKTQIEQTNEERKLL 64


tr_hit_id A9T806
Definition tr|A9T806|A9T806_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 47
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918044|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A03.
(150 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T806|A9T806_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.4
tr|A3B286|A3B286_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4
tr|Q0DJF0|Q0DJF0_ORYSJ Os05g0295100 protein OS=Oryza sativa subs... 33 9.4
tr|B8AW48|B8AW48_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.4
tr|B7F1E3|B7F1E3_ORYSJ cDNA clone:002-145-A02, full insert seque... 33 9.4

>tr|A9T806|A9T806_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168559 PE=4 SV=1
Length = 902

Score = 35.4 bits (80), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1

Query: 150 EYNLTDKEVASLLKRGAKFRSERIASGIQKSKWLTTESDLPLEDRNL 10
E ++ D ++A L+ KF++E +G+ K WLT S P ++ L
Sbjct: 332 ELDIADTKIAELVDGKVKFKTEMKVAGLPKGTWLTNTSTFPKVEKEL 378


>tr|A3B286|A3B286_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017158 PE=4 SV=1
Length = 238

Score = 35.4 bits (80), Expect = 1.4
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1

Query: 141 LTDKEVASLLKRGAKFRSERIASGIQKSKWLTTESDLPLEDRNL 10
+T++EV +LLK+ KF+ E A I KSKW+ T + P NL
Sbjct: 121 ITNEEVNALLKQKCKFKWEVPAEDIPKSKWVGTAAKPPAVIHNL 164


>tr|Q0DJF0|Q0DJF0_ORYSJ Os05g0295100 protein OS=Oryza sativa subsp.
japonica GN=Os05g0295100 PE=4 SV=1
Length = 664

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1

Query: 141 LTDKEVASLLKRGAKFRSERIASGIQKSKWLTT 43
+T++EV +LLK+ KF+ E A I KSKW+ T
Sbjct: 121 ITNEEVNALLKQKCKFKWEVPAEDIPKSKWVGT 153


>tr|B8AW48|B8AW48_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19324 PE=4 SV=1
Length = 266

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1

Query: 141 LTDKEVASLLKRGAKFRSERIASGIQKSKWLTT 43
+T++EV +LLK+ KF+ E A I KSKW+ T
Sbjct: 121 ITNEEVNALLKQKCKFKWEVPAEDIPKSKWVGT 153


>tr|B7F1E3|B7F1E3_ORYSJ cDNA clone:002-145-A02, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 382

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1

Query: 141 LTDKEVASLLKRGAKFRSERIASGIQKSKWLTT 43
+T++EV +LLK+ KF+ E A I KSKW+ T
Sbjct: 121 ITNEEVNALLKQKCKFKWEVPAEDIPKSKWVGT 153