BP918045
Clone id YMU001_000109_A04
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTGGAAGATCCAGTGGCTCCTCGGGAATGGCGTTGGCGGTGGCTCCATTCTTTAGGCTTT
GACATGTCAGCAGTTTGTTACATTCTACATCTAGTCTCATAGATCCATTAGAGTTCAAAG
TGTTACCCATAAGATCTCATAGCCTATATATAATCATGGAGATTTCCTATCAATAGTTAA
GTCTACCATTAGCATAGTCAACATACTTCCGACCTTTCTTTGTCTCAAATATGCATGTCA
TATGCTGTGCTCTACGTACCACATGTGGAATAGTAGCATGCCCACCCATAAATATCCTTT
CCATTTAAGTTGTCTCTTGTGTATTAGAACGCCCTCTTTTTATCCATGCCTACAATCTAT
AGAATCAATGCTACCCTCAGTGTCTCTTGTGTATTAGAACGCCCTCTTTTTATCCATGCC
TACAATCAATGCTACCCTCAGTGCTCTCTACTCTTGCTAATGCGCCA
■■Homology search results ■■ -
sp_hit_id Q8BU91
Definition sp|Q8BU91|S26A9_MOUSE Solute carrier family 26 member 9 OS=Mus musculus
Align length 30
Score (bit) 27.3
E-value 0.43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918045|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A04.
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BU91|S26A9_MOUSE Solute carrier family 26 member 9 OS=Mus m... 27 0.43
sp|Q7LBE3|S26A9_HUMAN Solute carrier family 26 member 9 OS=Homo ... 27 1.5
sp|Q9QZK9|DNS2B_RAT Deoxyribonuclease-2-beta OS=Rattus norvegicu... 31 3.1
sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=... 30 5.2
sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=... 30 5.2
sp|Q96NY8|PVRL4_HUMAN Poliovirus receptor-related protein 4 OS=H... 29 8.9
sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus GN=F... 29 8.9

>sp|Q8BU91|S26A9_MOUSE Solute carrier family 26 member 9 OS=Mus
musculus GN=Slc26a9 PE=2 SV=1
Length = 790

Score = 27.3 bits (59), Expect(2) = 0.43
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3

Query: 183 LPLA*STYFRPFFVSNMHVICCALRTTCGI 272
+ L S +F FF +HVICCAL T +
Sbjct: 370 IALGCSNFFGSFF--KIHVICCALSVTLAV 397



Score = 24.6 bits (52), Expect(2) = 0.43
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1

Query: 10 PVAPREWRWRWLHSLGFDMSAVCYILHL 93
PVAP +W+ + F ++ V Y+++L
Sbjct: 322 PVAPMVSQWKGMVGTAFSLAIVGYVINL 349


>sp|Q7LBE3|S26A9_HUMAN Solute carrier family 26 member 9 OS=Homo
sapiens GN=SLC26A9 PE=2 SV=1
Length = 791

Score = 27.3 bits (59), Expect(2) = 1.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3

Query: 183 LPLA*STYFRPFFVSNMHVICCALRTTCGI 272
+ L S +F FF +HVICCAL T +
Sbjct: 370 IALGCSNFFGSFF--KIHVICCALSVTLAV 397



Score = 22.7 bits (47), Expect(2) = 1.5
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1

Query: 10 PVAPREWRWRWLHSLGFDMSAVCYILHL 93
PV+P +W+ + F ++ V Y+++L
Sbjct: 322 PVSPVVSQWKDMIGTAFSLAIVSYVINL 349


>sp|Q9QZK9|DNS2B_RAT Deoxyribonuclease-2-beta OS=Rattus norvegicus
GN=Dnase2b PE=1 SV=1
Length = 356

Score = 30.8 bits (68), Expect = 3.1
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2

Query: 161 DFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHMWNSSMPTH-KYPFHLSCLLCIRTP 334
+FL KST +I ++ K H+L ++ N +P++ P+H+ + IR P
Sbjct: 231 NFLHFAKSTFYTDDIFAAWIAQKLKVHLLVESWQRKNHELPSNCSLPYHVYNIKAIRGP 289


>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4
OS=Pongo abelii GN=USP4 PE=2 SV=1
Length = 963

Score = 30.0 bits (66), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2

Query: 320 CIRTPSFYPCLQSIESMLPSVSLVY*NALFLSMPTINATLSALYSC*C 463
C+ P ++ +S S S S +Y L LS+P TL +LY C
Sbjct: 577 CVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVC 624


>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4
OS=Homo sapiens GN=USP4 PE=1 SV=3
Length = 963

Score = 30.0 bits (66), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2

Query: 320 CIRTPSFYPCLQSIESMLPSVSLVY*NALFLSMPTINATLSALYSC*C 463
C+ P ++ +S S S S +Y L LS+P TL +LY C
Sbjct: 577 CVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVC 624


>sp|Q96NY8|PVRL4_HUMAN Poliovirus receptor-related protein 4 OS=Homo
sapiens GN=PVRL4 PE=1 SV=1
Length = 510

Score = 29.3 bits (64), Expect = 8.9
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2

Query: 104 SIRVQSVTHKIS*PIYNHGDFLSIVKSTISIVNILPTFL-CLKYACHMLCSTYHMWNSSM 280
S R VT + P + G + +V +++ +V ++ L CL +L S YH +
Sbjct: 322 SSRDSQVTVDVLDPQEDSGKQVDLVSASVVVVGVIAALLFCLLVVVVVLMSRYHRRKAQQ 381

Query: 281 PTHKYPFHLS 310
T KY L+
Sbjct: 382 MTQKYEEELT 391


>sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus
GN=Fbxo40 PE=2 SV=1
Length = 710

Score = 29.3 bits (64), Expect = 8.9
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2

Query: 197 VNILPTFLCLKYACHMLC-STYHMWNSSMPTHKYPF-HLSCL 316
V + P+ CL +CH+LC +T+HM S T P + CL
Sbjct: 25 VPVEPSVSCLVISCHLLCGATFHMCKESEHTLLCPLEQVPCL 66


tr_hit_id Q9XMG4
Definition tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus vogeli
Align length 75
Score (bit) 37.7
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918045|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A04.
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 38 0.29
tr|A4PBD6|A4PBD6_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 38 0.29
tr|Q9XMF7|Q9XMF7_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 36 1.1
tr|B4NG87|B4NG87_DROWI GK22390 OS=Drosophila willistoni GN=GK223... 36 1.1
tr|Q9XMF6|Q9XMF6_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 34 3.2
tr|Q953M5|Q953M5_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 34 3.2
tr|Q5BYX5|Q5BYX5_SCHJA SJCHGC02660 protein (Fragment) OS=Schisto... 34 3.2
tr|B6ECH1|B6ECH1_9CEST NADH dehydrogenase subunit 1 (Fragment) O... 34 3.2
tr|A1YYV4|A1YYV4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 34 3.2
tr|Q15G68|Q15G68_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 5.5
tr|A4PBG6|A4PBG6_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 33 5.5
tr|Q8HIK8|Q8HIK8_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 7.2
tr|Q9THA4|Q9THA4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 9.4

>tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1
(Fragment) OS=Echinococcus vogeli GN=ND1 PE=3 SV=1
Length = 157

Score = 37.7 bits (86), Expect = 0.29
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ S V+ F+C+ C + C +Y++ WN + Y
Sbjct: 82 YNNYSFLSSVRCAFSSVSFEACFMCVVIFCALCCCSYNLVDFYNSCWWNWLLFPLIYGLF 141

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 142 LICVLCETNRTPFDY 156


>tr|A4PBD6|A4PBD6_9CEST NADH-ubiquinone oxidoreductase chain 1
OS=Echinococcus vogeli GN=nad1 PE=3 SV=1
Length = 297

Score = 37.7 bits (86), Expect = 0.29
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ S V+ F+C+ C + C +Y++ WN + Y
Sbjct: 127 YNNYSFLSSVRCAFSSVSFEACFMCVVIFCALCCCSYNLVDFYNSCWWNWLLFPLIYGLF 186

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 187 LICVLCETNRTPFDY 201


>tr|Q9XMF7|Q9XMF7_9CEST NADH-ubiquinone oxidoreductase chain 1
(Fragment) OS=Echinococcus ortleppi GN=ND1 PE=3 SV=1
Length = 157

Score = 35.8 bits (81), Expect = 1.1
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN FLS V+ V+ F+C+ C + C +Y++ W+ + Y F
Sbjct: 82 YNSYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLIDFYHSYWWSWLLFPLIYGFF 141

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 142 LVCVLCETNRTPFDY 156


>tr|B4NG87|B4NG87_DROWI GK22390 OS=Drosophila willistoni GN=GK22390
PE=4 SV=1
Length = 226

Score = 35.8 bits (81), Expect = 1.1
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +2

Query: 29 GVGGGSIL*ALTCQQFVTFYI*SHR------SIRVQSVTHKIS*PIYNHGDFLSIVKSTI 190
G GG +I ALTCQ+ + I + + + ++ +V HKI + H DFL KST+
Sbjct: 59 GCGGNAIQFALTCQRVIAIDIDAQKLAMAKHNAKIYNVDHKIE---FIHADFLQFAKSTL 115

Query: 191 SIVNIL 208
N++
Sbjct: 116 LKPNMV 121


>tr|Q9XMF6|Q9XMF6_9CEST NADH-ubiquinone oxidoreductase chain 1
(Fragment) OS=Echinococcus equinus GN=ND1 PE=3 SV=1
Length = 157

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y
Sbjct: 82 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 141

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 142 LVCVLCETNRTPFDY 156


>tr|Q953M5|Q953M5_9CEST NADH-ubiquinone oxidoreductase chain 1
OS=Echinococcus equinus GN=ND1 PE=3 SV=1
Length = 297

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y
Sbjct: 127 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 186

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 187 LVCVLCETNRTPFDY 201


>tr|Q5BYX5|Q5BYX5_SCHJA SJCHGC02660 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 176

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2

Query: 136 DLMGNTLNSNGSMRLDVECNKLLTCQSLKNGATANAIPEEPLDLP 2
+ M N N+ G+ +D +C+ CQS+ T + +P++PL LP
Sbjct: 115 ETMKNNANNIGNFLMDTDCHYSNNCQSVSFLRTTDHLPQQPLLLP 159


>tr|B6ECH1|B6ECH1_9CEST NADH dehydrogenase subunit 1 (Fragment)
OS=Echinococcus equinus GN=ND1 PE=4 SV=1
Length = 162

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y
Sbjct: 85 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 144

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 145 LVCVLCETNRTPFDY 159


>tr|A1YYV4|A1YYV4_9CEST NADH-ubiquinone oxidoreductase chain 1
(Fragment) OS=Echinococcus equinus PE=3 SV=1
Length = 130

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y
Sbjct: 55 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 114

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 115 LVCVLCETNRTPFDY 129


>tr|Q15G68|Q15G68_9CEST NADH-ubiquinone oxidoreductase chain 1
(Fragment) OS=Echinococcus ortleppi GN=ND1 PE=3 SV=1
Length = 157

Score = 33.5 bits (75), Expect = 5.5
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Frame = +2

Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304
YN FLS V+ V+ F+C+ C + C +Y++ W+ + Y
Sbjct: 82 YNSYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLIDFYHSYWWSWLLFPLIYGLF 141

Query: 305 LSCLLC--IRTPSFY 343
L C+LC RTP Y
Sbjct: 142 LVCVLCETNRTPFDY 156