BP918045 |
Clone id |
YMU001_000109_A04 |
Library |
YMU01 |
Length |
467 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_A04. |
Accession |
BP918045 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1689Contig1 |
Sequence |
CTGGAAGATCCAGTGGCTCCTCGGGAATGGCGTTGGCGGTGGCTCCATTCTTTAGGCTTT GACATGTCAGCAGTTTGTTACATTCTACATCTAGTCTCATAGATCCATTAGAGTTCAAAG TGTTACCCATAAGATCTCATAGCCTATATATAATCATGGAGATTTCCTATCAATAGTTAA GTCTACCATTAGCATAGTCAACATACTTCCGACCTTTCTTTGTCTCAAATATGCATGTCA TATGCTGTGCTCTACGTACCACATGTGGAATAGTAGCATGCCCACCCATAAATATCCTTT CCATTTAAGTTGTCTCTTGTGTATTAGAACGCCCTCTTTTTATCCATGCCTACAATCTAT AGAATCAATGCTACCCTCAGTGTCTCTTGTGTATTAGAACGCCCTCTTTTTATCCATGCC TACAATCAATGCTACCCTCAGTGCTCTCTACTCTTGCTAATGCGCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BU91 |
Definition |
sp|Q8BU91|S26A9_MOUSE Solute carrier family 26 member 9 OS=Mus musculus |
Align length |
30 |
Score (bit) |
27.3 |
E-value |
0.43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9XMG4 |
Definition |
tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus vogeli |
Align length |
75 |
Score (bit) |
37.7 |
E-value |
0.29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918045|Adiantum capillus-veneris mRNA, clone: YMU001_000109_A04. (467 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 38 0.29 tr|A4PBD6|A4PBD6_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 38 0.29 tr|Q9XMF7|Q9XMF7_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 36 1.1 tr|B4NG87|B4NG87_DROWI GK22390 OS=Drosophila willistoni GN=GK223... 36 1.1 tr|Q9XMF6|Q9XMF6_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 34 3.2 tr|Q953M5|Q953M5_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 34 3.2 tr|Q5BYX5|Q5BYX5_SCHJA SJCHGC02660 protein (Fragment) OS=Schisto... 34 3.2 tr|B6ECH1|B6ECH1_9CEST NADH dehydrogenase subunit 1 (Fragment) O... 34 3.2 tr|A1YYV4|A1YYV4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 34 3.2 tr|Q15G68|Q15G68_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 5.5 tr|A4PBG6|A4PBG6_9CEST NADH-ubiquinone oxidoreductase chain 1 OS... 33 5.5 tr|Q8HIK8|Q8HIK8_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 7.2 tr|Q9THA4|Q9THA4_9CEST NADH-ubiquinone oxidoreductase chain 1 (F... 33 9.4
>tr|Q9XMG4|Q9XMG4_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus vogeli GN=ND1 PE=3 SV=1 Length = 157
Score = 37.7 bits (86), Expect = 0.29 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ S V+ F+C+ C + C +Y++ WN + Y Sbjct: 82 YNNYSFLSSVRCAFSSVSFEACFMCVVIFCALCCCSYNLVDFYNSCWWNWLLFPLIYGLF 141
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 142 LICVLCETNRTPFDY 156
>tr|A4PBD6|A4PBD6_9CEST NADH-ubiquinone oxidoreductase chain 1 OS=Echinococcus vogeli GN=nad1 PE=3 SV=1 Length = 297
Score = 37.7 bits (86), Expect = 0.29 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ S V+ F+C+ C + C +Y++ WN + Y Sbjct: 127 YNNYSFLSSVRCAFSSVSFEACFMCVVIFCALCCCSYNLVDFYNSCWWNWLLFPLIYGLF 186
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 187 LICVLCETNRTPFDY 201
>tr|Q9XMF7|Q9XMF7_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus ortleppi GN=ND1 PE=3 SV=1 Length = 157
Score = 35.8 bits (81), Expect = 1.1 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN FLS V+ V+ F+C+ C + C +Y++ W+ + Y F Sbjct: 82 YNSYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLIDFYHSYWWSWLLFPLIYGFF 141
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 142 LVCVLCETNRTPFDY 156
>tr|B4NG87|B4NG87_DROWI GK22390 OS=Drosophila willistoni GN=GK22390 PE=4 SV=1 Length = 226
Score = 35.8 bits (81), Expect = 1.1 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%) Frame = +2
Query: 29 GVGGGSIL*ALTCQQFVTFYI*SHR------SIRVQSVTHKIS*PIYNHGDFLSIVKSTI 190 G GG +I ALTCQ+ + I + + + ++ +V HKI + H DFL KST+ Sbjct: 59 GCGGNAIQFALTCQRVIAIDIDAQKLAMAKHNAKIYNVDHKIE---FIHADFLQFAKSTL 115
Query: 191 SIVNIL 208 N++ Sbjct: 116 LKPNMV 121
>tr|Q9XMF6|Q9XMF6_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus equinus GN=ND1 PE=3 SV=1 Length = 157
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y Sbjct: 82 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 141
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 142 LVCVLCETNRTPFDY 156
>tr|Q953M5|Q953M5_9CEST NADH-ubiquinone oxidoreductase chain 1 OS=Echinococcus equinus GN=ND1 PE=3 SV=1 Length = 297
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y Sbjct: 127 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 186
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 187 LVCVLCETNRTPFDY 201
>tr|Q5BYX5|Q5BYX5_SCHJA SJCHGC02660 protein (Fragment) OS=Schistosoma japonicum PE=2 SV=2 Length = 176
Score = 34.3 bits (77), Expect = 3.2 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2
Query: 136 DLMGNTLNSNGSMRLDVECNKLLTCQSLKNGATANAIPEEPLDLP 2 + M N N+ G+ +D +C+ CQS+ T + +P++PL LP Sbjct: 115 ETMKNNANNIGNFLMDTDCHYSNNCQSVSFLRTTDHLPQQPLLLP 159
>tr|B6ECH1|B6ECH1_9CEST NADH dehydrogenase subunit 1 (Fragment) OS=Echinococcus equinus GN=ND1 PE=4 SV=1 Length = 162
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y Sbjct: 85 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 144
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 145 LVCVLCETNRTPFDY 159
>tr|A1YYV4|A1YYV4_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus equinus PE=3 SV=1 Length = 130
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN+ FLS V+ V+ F+C+ C + C +Y++ W+ + Y Sbjct: 55 YNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLVDFYYSCWWSWLLFPLIYGLF 114
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 115 LVCVLCETNRTPFDY 129
>tr|Q15G68|Q15G68_9CEST NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Echinococcus ortleppi GN=ND1 PE=3 SV=1 Length = 157
Score = 33.5 bits (75), Expect = 5.5 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Frame = +2
Query: 149 YNHGDFLSIVKSTISIVNILPTFLCLKYACHMLCSTYHM--------WNSSMPTHKYPFH 304 YN FLS V+ V+ F+C+ C + C +Y++ W+ + Y Sbjct: 82 YNSYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCSYNLIDFYHSYWWSWLLFPLIYGLF 141
Query: 305 LSCLLC--IRTPSFY 343 L C+LC RTP Y Sbjct: 142 LVCVLCETNRTPFDY 156
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