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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918049
Clone id YMU001_000109_A08
Library
Length 458
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TAGATTGAGCATTAATAGAACGAAAACGACGAATGTGGCATCATACATAAACAGTGGCAT
GTTTATTCCAACTCTAAGATACACAGAGGGCAACACAATCAATTCCTATGTCCAGAAGCT
TGCTTTTGAGACTTGAGTTACCGCAGCTTTAGGCCGTAATGGTTGCACAAGAGATGCAGG
GGCCCAGAGGATACACCGCAGAAGTCTGCCAATCATCACTCCCACTTGTGTTGGGATCAT
ACACCAATGTTTTGCAGCCCGAATCTGTCCTCCTTGGAAAAAGCAAAATTTTGCCATTGA
AACTGCCCAAACAGAAGCCCAAACTCAAACTCCCTGTTAGTGGGATAGGCACACTTTTCC
AGGCATTTTGTGCAGGATCATAGACCGCCAGCTTCCTCTCATTCTTCCATTCTATGCAAT
AGACTTTCTTGTCAAGGCATGCATGTGCTAAAACCATC
■■Homology search results ■■ -
sp_hit_id Q9CAG8
Definition sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Arabidopsis thaliana
Align length 102
Score (bit) 98.6
E-value 1.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918049|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A08.
         (458 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Ar...    99   1e-20
sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27...    45   1e-04
sp|Q6Q7X9|KLH31_DANRE Kelch-like protein 31 OS=Danio rerio GN=kl...    32   1.3  
sp|A1JMV0|NANM_YERE8 N-acetylneuraminate epimerase OS=Yersinia e...    31   2.3  
sp|Q9SIJ3|FBK32_ARATH Putative F-box/Kelch-repeat protein At2g21...    31   2.3  
sp|Q9T0E4|FBK81_ARATH Putative F-box/Kelch-repeat protein At4g11...    30   5.0  
sp|A8GPB1|UBIG_RICAH 3-demethylubiquinone-9 3-methyltransferase ...    30   6.6  

>sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480
           OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1
          Length = 376

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 44/102 (43%), Positives = 65/102 (63%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AH  + KK++CI+WKN RK++V++     W+ V +PL+GS   GF  G  +GK+LLF
Sbjct: 275 MVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETWEVVALPLSGSSRAGFQFGKLSGKLLLF 334

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
             + ++G  TL+YDP+ S    W+TS +   G C+   TITA
Sbjct: 335 SSQEETGQCTLLYDPDASPGTQWKTSEIKLSGSCVCSVTITA 376


>sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27420
           OS=Arabidopsis thaliana GN=At1g27420 PE=4 SV=1
          Length = 360

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = -2

Query: 454 VLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFC--LGSFNGKILL 281
           V ++  +  KVY ++     +L V+DP +N+W SV +P       GF   LG +N K+LL
Sbjct: 262 VYSYTVVRNKVYFMDRNMPGRLGVFDPEENSWSSVFVPPREG---GFWVRLGVWNNKVLL 318

Query: 280 FPRRTDSGCKTLVYDPNTSGSDDWQ 206
           F R    G +TL+YD +      W+
Sbjct: 319 FSR--VCGHETLMYDLDKEKGSKWR 341


>sp|Q6Q7X9|KLH31_DANRE Kelch-like protein 31 OS=Danio rerio
           GN=klhl31 PE=2 SV=1
          Length = 635

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
 Frame = -2

Query: 406 KNERKLAV-----YDPAQNAWKSVPIPLTGSLS--LGFCLGSFNGKILLFPRRTDSGCKT 248
           +N+ K AV     YDP  N W    I L   +     F L +FNG +     R   GC+ 
Sbjct: 380 RNQAKHAVSNFSRYDPRFNTW----IHLANMIQKRTHFSLNTFNGLLFAVGGRNSDGCQA 435

Query: 247 LV--YDPNTSGSDDWQTSAVYPLGPCISCATI 158
            V  Y P+   S+ WQ  A   +  C   +++
Sbjct: 436 SVECYVPS---SNQWQMKAPMEVPRCCHASSV 464


>sp|A1JMV0|NANM_YERE8 N-acetylneuraminate epimerase OS=Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
           GN=nanM PE=3 SV=1
          Length = 392

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 397 RKLAVYDPAQNAWKS-VPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKT-LVYDPNTS 224
           R + +YDPA+N WKS   +P  G  + G  + +  G ++L       G +T  V+   T 
Sbjct: 206 RDVLMYDPAKNQWKSGGQVPFLG--TAGSAITAKKGDLILINGEIKPGLRTAAVWQGKTQ 263

Query: 223 GSD-DWQ 206
           G++  WQ
Sbjct: 264 GTELKWQ 270


>sp|Q9SIJ3|FBK32_ARATH Putative F-box/Kelch-repeat protein At2g21680
           OS=Arabidopsis thaliana GN=At2g21680 PE=2 SV=1
          Length = 414

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -2

Query: 451 LAHACLDKKVYCIEWKNERKLAVYDPAQNAWKS-VPIPLTGSLSLGFCL 308
           L +A + +K+YC++    R + +YDP ++ W+S    PL+ S +   C+
Sbjct: 249 LTYAVMKEKIYCLDLT--RNIHIYDPKESKWESWTHGPLSASWNDSSCV 295


>sp|Q9T0E4|FBK81_ARATH Putative F-box/Kelch-repeat protein At4g11770
           OS=Arabidopsis thaliana GN=At4g11770 PE=2 SV=1
          Length = 396

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = -2

Query: 436 LDKKVYCIE-WKNE---RKLAVYDPAQNAWKSVPIPLTGSLSLGFCLG-SFNGKILLFPR 272
           LD K+Y +E W+       + ++DP    W+ VP P           G  +  K+ LF  
Sbjct: 195 LDGKIYVVEGWRGSDYSNLIEIFDPKTQKWEHVPSPSAEMRGRYISKGLVYEEKLYLF-- 252

Query: 271 RTDSGCKTLVYDPNTSGSD 215
               G K +VY P  S  D
Sbjct: 253 ----GDKNVVYKPKESRWD 267


>sp|A8GPB1|UBIG_RICAH 3-demethylubiquinone-9 3-methyltransferase
           OS=Rickettsia akari (strain Hartford) GN=ubiG PE=3 SV=1
          Length = 251

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -2

Query: 400 ERKLAVYDPAQNAWKSVPIPLTGSLSLGF--CLGSFNGK 290
           E K  VYDPA+N WK     L+  + + +  CLGS N K
Sbjct: 205 ELKGLVYDPAKNEWK-----LSDDIDVNYFMCLGSKNAK 238
tr_hit_id A9NX50
Definition tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 102
Score (bit) 132.0
E-value 9.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918049|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A08.
         (458 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea...   132   9e-30
tr|A7QP88|A7QP88_VITVI Chromosome chr1 scaffold_136, whole genom...   124   2e-27
tr|A5BA49|A5BA49_VITVI Putative uncharacterized protein OS=Vitis...   124   2e-27
tr|Q6K649|Q6K649_ORYSJ Os02g0504900 protein OS=Oryza sativa subs...   116   6e-25
tr|A3A772|A3A772_ORYSJ Putative uncharacterized protein OS=Oryza...   116   6e-25
tr|A2X562|A2X562_ORYSI Putative uncharacterized protein OS=Oryza...   116   6e-25
tr|Q7XNP9|Q7XNP9_ORYSJ Os04g0380300 protein OS=Oryza sativa subs...   109   6e-23
tr|B8AT23|B8AT23_ORYSI Putative uncharacterized protein OS=Oryza...   106   5e-22
tr|B6LVY3|B6LVY3_BRAFL Putative uncharacterized protein OS=Branc...    34   3.2  
tr|B0P896|B0P896_9FIRM Putative uncharacterized protein OS=Anaer...    34   4.1  
tr|A3UDK4|A3UDK4_9RHOB Putative uncharacterized protein OS=Ocean...    33   5.4  
tr|Q8H9Z0|Q8H9Z0_9CAUD Orf1 OS=Lactococcus phage CHL92 PE=4 SV=1       33   7.1  
tr|B6N4B0|B6N4B0_BRAFL Putative uncharacterized protein OS=Branc...    33   7.1  
tr|B6MMS9|B6MMS9_BRAFL Putative uncharacterized protein OS=Branc...    33   7.1  
tr|B0WSW4|B0WSW4_CULQU Putative uncharacterized protein OS=Culex...    33   7.1  
tr|A8WHU9|A8WHU9_DANRE Novel protein similar to vertebrate kelch...    33   9.2  
tr|A9AXQ6|A9AXQ6_HERA2 Kelch repeat-containing protein OS=Herpet...    33   9.2  
tr|A5FVW6|A5FVW6_ACICJ Putative uncharacterized protein OS=Acidi...    33   9.2  
tr|A6C768|A6C768_9PLAN Putative uncharacterized protein OS=Planc...    33   9.2  
tr|Q7XES2|Q7XES2_ORYSJ Os10g0409900 protein OS=Oryza sativa subs...    33   9.2  
tr|B8BGS5|B8BGS5_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A3C4N2|A3C4N2_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A0SHK4|A0SHK4_ORYRU Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHK1|A0SHK1_ORYRU Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ8|A0SHJ8_ORYRU Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ6|A0SHJ6_ORYRU Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ5|A0SHJ5_ORYRU Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ4|A0SHJ4_ORYSI Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ3|A0SHJ3_ORYSI Kelch-motif containing protein (Fragment)...    33   9.2  
tr|A0SHJ2|A0SHJ2_ORYSI Kelch-motif containing protein (Fragment)...    33   9.2  

>tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 386

 Score =  132 bits (332), Expect = 9e-30
 Identities = 58/102 (56%), Positives = 75/102 (73%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           M +AHA LDKK++C+EWKNERKLAV++   N+W+ VP+PLTGS+++GFC G  NG +LLF
Sbjct: 285 MAVAHAVLDKKLFCMEWKNERKLAVFNVVDNSWQRVPLPLTGSVTVGFCFGILNGNLLLF 344

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
           P + +  CKTLVYDPN     +WQ   + PLG CI   TITA
Sbjct: 345 PTKMEPLCKTLVYDPNAMPGLEWQAIDIRPLGICICTVTITA 386


>tr|A7QP88|A7QP88_VITVI Chromosome chr1 scaffold_136, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002843001
           PE=4 SV=1
          Length = 385

 Score =  124 bits (311), Expect = 2e-27
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AHA L KK++C+EWKN+RKLA+++P  N+WK VP+PLTGS S+GF  G   GK+LLF
Sbjct: 284 MVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLF 343

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
               D G +TL+YDP+ +   +WQTS + P G C+   TI A
Sbjct: 344 SLEEDPGYRTLLYDPDAAPGSEWQTSEIKPSGSCLCSVTIKA 385


>tr|A5BA49|A5BA49_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018334 PE=4 SV=1
          Length = 371

 Score =  124 bits (311), Expect = 2e-27
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AHA L KK++C+EWKN+RKLA+++P  N+WK VP+PLTGS S+GF  G   GK+LLF
Sbjct: 270 MVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLF 329

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
               D G +TL+YDP+ +   +WQTS + P G C+   TI A
Sbjct: 330 SLEEDPGYRTLLYDPDAAPGSEWQTSEIKPSGSCLCSVTIKA 371


>tr|Q6K649|Q6K649_ORYSJ Os02g0504900 protein OS=Oryza sativa subsp.
           japonica GN=OJ1003_F04.33 PE=4 SV=1
          Length = 385

 Score =  116 bits (290), Expect = 6e-25
 Identities = 54/102 (52%), Positives = 69/102 (67%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AHA LDKK++CIEWKN+R LAV++PA N+W+ VP+PLTGS S  FC G  +GK+LLF
Sbjct: 284 MVTAHAVLDKKLFCIEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLF 343

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
               +   KTL+YDP      +W TS + P G C+   TI A
Sbjct: 344 SLDEEPCYKTLMYDPAAPTGSEWFTSELKPPGLCLCSVTIRA 385


>tr|A3A772|A3A772_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006644 PE=4 SV=1
          Length = 364

 Score =  116 bits (290), Expect = 6e-25
 Identities = 54/102 (52%), Positives = 69/102 (67%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AHA LDKK++CIEWKN+R LAV++PA N+W+ VP+PLTGS S  FC G  +GK+LLF
Sbjct: 263 MVTAHAVLDKKLFCIEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLF 322

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
               +   KTL+YDP      +W TS + P G C+   TI A
Sbjct: 323 SLDEEPCYKTLMYDPAAPTGSEWFTSELKPPGLCLCSVTIRA 364


>tr|A2X562|A2X562_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07338 PE=4 SV=1
          Length = 364

 Score =  116 bits (290), Expect = 6e-25
 Identities = 54/102 (52%), Positives = 69/102 (67%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV AHA LDKK++CIEWKN+R LAV++PA N+W+ VP+PLTGS S  FC G  +GK+LLF
Sbjct: 263 MVTAHAVLDKKLFCIEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLF 322

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATITA 152
               +   KTL+YDP      +W TS + P G C+   TI A
Sbjct: 323 SLDEEPCYKTLMYDPAAPTGSEWCTSELKPPGLCLCSVTIRA 364


>tr|Q7XNP9|Q7XNP9_ORYSJ Os04g0380300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0089B03.12 PE=2 SV=1
          Length = 375

 Score =  109 bits (273), Expect = 6e-23
 Identities = 44/100 (44%), Positives = 70/100 (70%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV +HA ++K+++CIEWKN+R LA+++P+ ++W+ +P+PLTGS +  F LG  +GK+LLF
Sbjct: 274 MVTSHAVINKRLFCIEWKNQRSLAIFNPSDSSWQKIPVPLTGSSATLFSLGVLDGKLLLF 333

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATI 158
            +  + G +TL+YDP      +W TS + P G C+   TI
Sbjct: 334 SQEEEPGYQTLMYDPTAPAGSEWHTSTLKPSGLCLCSVTI 373


>tr|B8AT23|B8AT23_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15607 PE=4 SV=1
          Length = 377

 Score =  106 bits (265), Expect = 5e-22
 Identities = 44/100 (44%), Positives = 69/100 (69%)
 Frame = -2

Query: 457 MVLAHACLDKKVYCIEWKNERKLAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKILLF 278
           MV +HA +DK+++CIEWKN+R LA+++P+ ++W+ + +PLTGS +  F LG  +GK+LLF
Sbjct: 276 MVTSHAVIDKRLFCIEWKNQRSLAIFNPSDSSWQKILVPLTGSSTTLFSLGVLDGKLLLF 335

Query: 277 PRRTDSGCKTLVYDPNTSGSDDWQTSAVYPLGPCISCATI 158
            +  + G +TL+YDP      +W TS + P G C+   TI
Sbjct: 336 SQEEEPGYQTLMYDPTAPAGYEWHTSTLKPSGLCLCSVTI 375


>tr|B6LVY3|B6LVY3_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_278875 PE=4 SV=1
          Length = 639

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
 Frame = -2

Query: 442 ACLDKKVYCIEWKNERK-------LAVYDPAQNAWKSVPIPLTGSLSLGFCLGSFNGKIL 284
           A +  KVY I  K  +        + VYD + N W  V +PL     L   +  F+G I 
Sbjct: 447 AVVQGKVYAIGGKISQSPVCVTADVEVYDRSLNKWTGV-VPLPEPRFL-HAVAVFDGSIY 504

Query: 283 LFPRRTDSGCKTLVYDPNTSGSDDWQTSAVYP-LGPCISCATITA*SCGNSSLKSKLL 113
           +   R D  C T        G   W +++  P +G  I+ +T+   S   + ++SK+L
Sbjct: 505 VMGGRDDKDCNTSTVHHFIPGDSQWYSASDMPEVGSVITASTVNG-SIYVAGVRSKVL 561


>tr|B0P896|B0P896_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_00985
           PE=4 SV=1
          Length = 606

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 292 KILLFPRRTDSGCKTLVYDPNTSGSDDWQ 206
           KI L  R+    C+ L ++PN  G DDWQ
Sbjct: 372 KIYLMARKNGMACRQLTWNPNYKGFDDWQ 400